Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 MIR522-201ENST00000385071 87 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 SNORD41.1-201ENST00000391000 69 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 AC073464.1-201ENST00000429823 534 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 AL359672.1-201ENST00000442302 409 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 MIR18B-201ENST00000454574 71 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 RPL30P15-201ENST00000457129 321 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 RNA5SP180-201ENST00000516181 101 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 RNA5SP66-201ENST00000517178 101 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.4□□□□□ -2.47
ABCA4P78363 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.4□□□□□ -2.47
ABCA4P78363 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.4□□□□□ -2.47
ABCA4P78363 MTND1P8-201ENST00000571424 950 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 AC005357.1-201ENST00000588399 301 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 SNORD115-2-201ENST00000362842 82 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 RNU4-28P-201ENST00000364739 141 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 RNU6-901P-201ENST00000384593 106 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 SNORD38B-201ENST00000384690 67 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 MIR181B2-201ENST00000385004 89 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 MIR548H3-201ENST00000408771 118 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.4□□□□□ -2.47
ABCA4P78363 AC098614.3-201ENST00000438957 440 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 MTND1P26-201ENST00000440488 538 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 AL137792.2-201ENST00000443484 235 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.4□□□□□ -2.47
ABCA4P78363 MIR1270-201ENST00000459320 83 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 RNU6-998P-201ENST00000515894 101 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 RNU6-430P-201ENST00000517078 107 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 RNA5SP169-201ENST00000517268 117 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.4□□□□□ -2.47
ABCA4P78363 SCOCP1-201ENST00000554676 349 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 AL353803.5-201ENST00000599815 141 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 MIR6854-201ENST00000614935 69 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 AC007494.3-201ENST00000624660 743 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.4□□□□□ -2.47
ABCA4P78363 MTND5P17-201ENST00000418405 1603 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 MIR335-201ENST00000362173 94 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 RNY1P16-201ENST00000363063 111 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 RNU6-934P-201ENST00000365154 107 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 RNU4-17P-201ENST00000365598 141 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 MIR548I3-201ENST00000408378 149 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 MTCO2P11-201ENST00000431069 680 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.41□□□□□ -2.47
ABCA4P78363 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.41□□□□□ -2.47
ABCA4P78363 RNU6-341P-201ENST00000516973 96 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 AC022878.1-201ENST00000530684 149 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 AP003072.1-201ENST00000531740 145 ntBASIC-0.41□□□□□ -2.47
ABCA4P78363 MIR20A-201ENST00000362279 71 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 RNU6-454P-201ENST00000364292 107 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 SNORA20.2-201ENST00000383922 131 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 RNU6-831P-201ENST00000384548 107 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 MIR518F-201ENST00000384973 87 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 MTCO3P19-201ENST00000415864 321 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 MTCO2P16-201ENST00000436962 677 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.41□□□□□ -2.48
ABCA4P78363 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.41□□□□□ -2.48
ABCA4P78363 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 RNU7-141P-201ENST00000459304 62 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 SNORA40.9-201ENST00000515895 93 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 RNU6-410P-201ENST00000517006 107 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 MTND4LP18-201ENST00000526864 291 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.41□□□□□ -2.48
ABCA4P78363 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.41□□□□□ -2.48
ABCA4P78363 MIR4308-201ENST00000580634 81 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 AL391834.2-201ENST00000609982 546 ntBASIC-0.41□□□□□ -2.48
ABCA4P78363 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.42□□□□□ -2.48
ABCA4P78363 RNA5SP133-201ENST00000363368 119 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 SNORA1.2-201ENST00000365189 134 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 SNORA20B-201ENST00000384220 132 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 SNORA18-201ENST00000384416 132 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 MT-TN-201ENST00000387400 73 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 SNORA26.5-201ENST00000391215 123 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 MIR1278-201ENST00000408753 81 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 AL445193.1-201ENST00000441183 141 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 AP000533.3-201ENST00000447704 118 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.42□□□□□ -2.48
ABCA4P78363 snoU13.6-201ENST00000458785 104 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 SNORA19.2-201ENST00000516013 114 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.42□□□□□ -2.48
ABCA4P78363 MTCO3P23-201ENST00000561363 289 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.42□□□□□ -2.48
ABCA4P78363 BNIP3P39-201ENST00000601077 554 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 AC018714.1-201ENST00000605028 208 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 AC020891.4-201ENST00000605745 93 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 AL133255.1-201ENST00000606374 441 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 MIR6082-201ENST00000613604 109 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 AC069503.3-201ENST00000618674 145 ntBASIC-0.42□□□□□ -2.48
ABCA4P78363 AC126544.2-201ENST00000625174 749 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms