Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 SNORD33.1-201ENST00000516213 88 ntBASIC2.46□□□□□ -2.02
SLC6A11P48066 MIR5094-201ENST00000578766 85 ntBASIC2.46□□□□□ -2.02
SLC6A11P48066 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SLC6A11P48066 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SLC6A11P48066 Z82195.2-201ENST00000612348 18351 ntBASIC2.45□□□□□ -2.02
SLC6A11P48066 RNU6-1292P-201ENST00000383856 107 ntBASIC2.45□□□□□ -2.02
SLC6A11P48066 RNU6-429P-201ENST00000384582 108 ntBASIC2.45□□□□□ -2.02
SLC6A11P48066 RNU11-3P-201ENST00000391111 133 ntBASIC2.45□□□□□ -2.02
SLC6A11P48066 RNA5SP482-201ENST00000391269 118 ntBASIC2.45□□□□□ -2.02
SLC6A11P48066 RN7SKP192-201ENST00000411291 327 ntBASIC2.45□□□□□ -2.02
SLC6A11P48066 Y_RNA.630-201ENST00000411370 108 ntBASIC2.45□□□□□ -2.02
SLC6A11P48066 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC6A11P48066 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.45□□□□□ -2.02
SLC6A11P48066 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.45□□□□□ -2.02
SLC6A11P48066 RNU6-1149P-201ENST00000516810 97 ntBASIC2.45□□□□□ -2.02
SLC6A11P48066 MIR5092-201ENST00000583139 88 ntBASIC2.45□□□□□ -2.02
SLC6A11P48066 AC103810.6-201ENST00000606708 136 ntBASIC2.45□□□□□ -2.02
SLC6A11P48066 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.45□□□□□ -2.02
SLC6A11P48066 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.45□□□□□ -2.02
SLC6A11P48066 U6.95-201ENST00000636931 70 ntBASIC2.45□□□□□ -2.02
SLC6A11P48066 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SLC6A11P48066 U8.5-201ENST00000364528 136 ntBASIC2.44□□□□□ -2.02
SLC6A11P48066 SNORD58C-201ENST00000365223 64 ntBASIC2.44□□□□□ -2.02
SLC6A11P48066 RNU6-1144P-201ENST00000384247 104 ntBASIC2.44□□□□□ -2.02
SLC6A11P48066 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SLC6A11P48066 SNORD77.3-201ENST00000391113 65 ntBASIC2.44□□□□□ -2.02
SLC6A11P48066 Y_RNA.651-201ENST00000459380 103 ntBASIC2.44□□□□□ -2.02
SLC6A11P48066 RNU7-25P-201ENST00000516544 62 ntBASIC2.44□□□□□ -2.02
SLC6A11P48066 SNORD45.4-201ENST00000516629 73 ntBASIC2.44□□□□□ -2.02
SLC6A11P48066 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.44□□□□□ -2.02
SLC6A11P48066 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SLC6A11P48066 AC004486.1-201ENST00000546846 233 ntBASIC2.44□□□□□ -2.02
SLC6A11P48066 AC084364.2-201ENST00000546924 395 ntBASIC2.44□□□□□ -2.02
SLC6A11P48066 MIR4762-201ENST00000585261 75 ntBASIC2.44□□□□□ -2.02
SLC6A11P48066 AC108081.1-201ENST00000604358 221 ntBASIC2.44□□□□□ -2.02
SLC6A11P48066 MIR1291-201ENST00000627649 87 ntBASIC2.44□□□□□ -2.02
SLC6A11P48066 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SLC6A11P48066 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
SLC6A11P48066 RNU6-1019P-201ENST00000364424 107 ntBASIC2.43□□□□□ -2.02
SLC6A11P48066 RNU6-440P-201ENST00000390882 105 ntBASIC2.43□□□□□ -2.02
SLC6A11P48066 HMGN2P35-201ENST00000412164 270 ntBASIC2.43□□□□□ -2.02
SLC6A11P48066 snoU13.15-201ENST00000459407 104 ntBASIC2.43□□□□□ -2.02
SLC6A11P48066 RNU6-781P-201ENST00000516377 101 ntBASIC2.43□□□□□ -2.02
SLC6A11P48066 MIR4648-201ENST00000580107 72 ntBASIC2.43□□□□□ -2.02
SLC6A11P48066 MIR8054-201ENST00000620877 86 ntBASIC2.43□□□□□ -2.02
SLC6A11P48066 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.43□□□□□ -2.02
SLC6A11P48066 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
SLC6A11P48066 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
SLC6A11P48066 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SLC6A11P48066 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.42□□□□□ -2.02
SLC6A11P48066 MAPK10-266ENST00000641066 6555 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 SNORA63.4-201ENST00000362763 126 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 SNORA25.6-201ENST00000364121 118 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 SNORA80E-201ENST00000384744 137 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 AL021397.1-201ENST00000451806 248 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 RNU7-28P-201ENST00000516759 62 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 MIR5194-201ENST00000582634 120 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 MIR3670-2-201ENST00000582974 65 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 MIR3670-1-201ENST00000584160 65 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 MIR3670-3-201ENST00000584855 65 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 MIR3670-4-201ENST00000612260 65 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 AC015726.2-201ENST00000620112 122 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 AL121890.5-201ENST00000620848 304 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 AC016717.2-201ENST00000609089 5141 ntBASIC2.42□□□□□ -2.02
SLC6A11P48066 RNU6-268P-201ENST00000364174 107 ntBASIC2.41□□□□□ -2.02
SLC6A11P48066 SUMO1P4-201ENST00000429430 302 ntBASIC2.41□□□□□ -2.02
SLC6A11P48066 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.41□□□□□ -2.02
SLC6A11P48066 RNA5SP236-201ENST00000516169 116 ntBASIC2.41□□□□□ -2.02
SLC6A11P48066 AC006441.5-201ENST00000612680 209 ntBASIC2.41□□□□□ -2.02
SLC6A11P48066 MIR376A2-201ENST00000636782 80 ntBASIC2.41□□□□□ -2.02
SLC6A11P48066 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SLC6A11P48066 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SLC6A11P48066 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SLC6A11P48066 DEFA7P-201ENST00000382676 285 ntBASIC2.4□□□□□ -2.03
SLC6A11P48066 RNU6-163P-201ENST00000384396 106 ntBASIC2.4□□□□□ -2.03
SLC6A11P48066 MIR548A3-201ENST00000385297 97 ntBASIC2.4□□□□□ -2.03
SLC6A11P48066 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SLC6A11P48066 Y_RNA.617-201ENST00000410920 90 ntBASIC2.4□□□□□ -2.03
SLC6A11P48066 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.4□□□□□ -2.03
SLC6A11P48066 RN7SKP19-201ENST00000516016 252 ntBASIC2.4□□□□□ -2.03
SLC6A11P48066 RNA5SP137-201ENST00000516833 135 ntBASIC2.4□□□□□ -2.03
SLC6A11P48066 RNU6-1116P-201ENST00000517269 99 ntBASIC2.4□□□□□ -2.03
SLC6A11P48066 MIR5197-201ENST00000583721 112 ntBASIC2.4□□□□□ -2.03
SLC6A11P48066 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.4□□□□□ -2.03
SLC6A11P48066 AL670379.3-201ENST00000605040 251 ntBASIC2.4□□□□□ -2.03
SLC6A11P48066 SNORA28-201ENST00000606769 126 ntBASIC2.4□□□□□ -2.03
SLC6A11P48066 AC134878.1-201ENST00000619901 243 ntBASIC2.4□□□□□ -2.03
SLC6A11P48066 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SLC6A11P48066 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SLC6A11P48066 SNORD115-28-201ENST00000363931 81 ntBASIC2.39□□□□□ -2.03
SLC6A11P48066 Y_RNA.336-201ENST00000365307 109 ntBASIC2.39□□□□□ -2.03
SLC6A11P48066 RNU6-1189P-201ENST00000383958 107 ntBASIC2.39□□□□□ -2.03
SLC6A11P48066 Y_RNA.547-201ENST00000384654 119 ntBASIC2.39□□□□□ -2.03
SLC6A11P48066 MIR1263-201ENST00000408324 86 ntBASIC2.39□□□□□ -2.03
SLC6A11P48066 AL356320.1-201ENST00000429616 163 ntBASIC2.39□□□□□ -2.03
SLC6A11P48066 AL445646.1-201ENST00000431784 216 ntBASIC2.39□□□□□ -2.03
SLC6A11P48066 HMGN2P3-201ENST00000433603 273 ntBASIC2.39□□□□□ -2.03
SLC6A11P48066 HMGN2P5-201ENST00000436882 273 ntBASIC2.39□□□□□ -2.03
SLC6A11P48066 HSPE1P9-201ENST00000440046 311 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms