Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.8□□□□□ -2.7
POLR1AO95602 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 SNORA25.17-201ENST00000517184 124 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 AP000676.1-201ENST00000533307 52 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 MIR3684-201ENST00000579779 74 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 AL353803.5-201ENST00000599815 141 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 AC131235.4-201ENST00000609288 620 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 RMST_3.1-201ENST00000611651 109 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 SNORD114-17-201ENST00000364699 75 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 RNU6-291P-201ENST00000384720 107 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
POLR1AO95602 MIR1284-201ENST00000408337 120 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 RNU2-8P-201ENST00000410727 190 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 AL008987.1-201ENST00000415528 237 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 RNY4-201ENST00000516507 96 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 RNU6-685P-201ENST00000517088 95 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 MTND3P13-201ENST00000574391 343 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.8□□□□□ -2.7
POLR1AO95602 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.8□□□□□ -2.7
POLR1AO95602 AL512506.1-201ENST00000613918 449 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 MIR6854-201ENST00000614935 69 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 Z97988.1-201ENST00000637697 135 ntBASIC-1.8□□□□□ -2.7
POLR1AO95602 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.81□□□□□ -2.7
POLR1AO95602 SNORD24-201ENST00000383884 75 ntBASIC-1.81□□□□□ -2.7
POLR1AO95602 RNU6-708P-201ENST00000384217 107 ntBASIC-1.81□□□□□ -2.7
POLR1AO95602 MIR558-201ENST00000384920 94 ntBASIC-1.81□□□□□ -2.7
POLR1AO95602 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.81□□□□□ -2.7
POLR1AO95602 U8.19-201ENST00000459095 133 ntBASIC-1.81□□□□□ -2.7
POLR1AO95602 U8.22-201ENST00000459141 133 ntBASIC-1.81□□□□□ -2.7
POLR1AO95602 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.81□□□□□ -2.7
POLR1AO95602 RNU7-161P-201ENST00000517289 62 ntBASIC-1.81□□□□□ -2.7
POLR1AO95602 SNORD114-7-201ENST00000362520 77 ntBASIC-1.82□□□□□ -2.7
POLR1AO95602 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.82□□□□□ -2.7
POLR1AO95602 snoU13.13-201ENST00000458842 104 ntBASIC-1.82□□□□□ -2.7
POLR1AO95602 AC245014.2-201ENST00000603689 287 ntBASIC-1.82□□□□□ -2.7
POLR1AO95602 AL136370.1-201ENST00000608166 691 ntBASIC-1.82□□□□□ -2.7
POLR1AO95602 MIR8068-201ENST00000618032 68 ntBASIC-1.82□□□□□ -2.7
POLR1AO95602 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 SNORD18.1-201ENST00000363807 70 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 RNU6-769P-201ENST00000384407 104 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 MIR548H1-201ENST00000408610 102 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 AC108059.2-201ENST00000434626 151 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 RNU7-55P-201ENST00000459426 62 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 SNORD18.2-201ENST00000459604 70 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 RNU6-723P-201ENST00000383973 107 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 RNU6-641P-201ENST00000384006 107 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.83□□□□□ -2.7
POLR1AO95602 AC100767.1-201ENST00000528178 123 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.83□□□□□ -2.7
POLR1AO95602 AC090616.2-202ENST00000584248 222 ntBASIC-1.83□□□□□ -2.7
POLR1AO95602 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.84□□□□□ -2.7
POLR1AO95602 MTND1P12-201ENST00000455231 147 ntBASIC-1.84□□□□□ -2.7
POLR1AO95602 AC022616.4-201ENST00000522985 181 ntBASIC-1.84□□□□□ -2.7
POLR1AO95602 MIR3941-201ENST00000582572 103 ntBASIC-1.84□□□□□ -2.7
POLR1AO95602 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.85□□□□□ -2.71
POLR1AO95602 RNU6-434P-201ENST00000384376 107 ntBASIC-1.85□□□□□ -2.71
POLR1AO95602 RNU6-905P-201ENST00000384434 107 ntBASIC-1.85□□□□□ -2.71
POLR1AO95602 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.85□□□□□ -2.71
POLR1AO95602 AL442663.2-201ENST00000554385 511 ntBASIC-1.85□□□□□ -2.71
POLR1AO95602 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 RNU6-883P-201ENST00000384597 107 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 RNU6-576P-201ENST00000390854 102 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.86□□□□□ -2.71
POLR1AO95602 AC018710.1-201ENST00000506509 158 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 SNORA25.10-201ENST00000515926 124 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 RNU6-107P-201ENST00000516643 102 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 AC069113.1-201ENST00000517763 267 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 MTND1P24-201ENST00000552175 861 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.86□□□□□ -2.71
POLR1AO95602 MIR335-201ENST00000362173 94 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 SNORD14E-201ENST00000364009 85 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 SNORD12C-201ENST00000386307 89 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-1.86□□□□□ -2.71
POLR1AO95602 MTATP6P18-201ENST00000417994 673 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 AL158053.1-201ENST00000441503 453 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.86□□□□□ -2.71
POLR1AO95602 RNU6-759P-201ENST00000516740 103 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 RNU6-410P-201ENST00000517006 107 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 AC103705.1-201ENST00000619013 241 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 AC068880.4-201ENST00000623082 495 ntBASIC-1.86□□□□□ -2.71
POLR1AO95602 MIR20A-201ENST00000362279 71 ntBASIC-1.87□□□□□ -2.71
POLR1AO95602 RNA5SP93-201ENST00000362525 114 ntBASIC-1.87□□□□□ -2.71
POLR1AO95602 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.87□□□□□ -2.71
POLR1AO95602 Y_RNA.151-201ENST00000363566 112 ntBASIC-1.87□□□□□ -2.71
POLR1AO95602 RNY4P28-201ENST00000365281 93 ntBASIC-1.87□□□□□ -2.71
POLR1AO95602 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.87□□□□□ -2.71
POLR1AO95602 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.87□□□□□ -2.71
POLR1AO95602 AC091144.1-201ENST00000519573 138 ntBASIC-1.87□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms