Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
SPDEFO95238 ZNF658B-202ENST00000615961 3375 ntBASIC2.07□□□□□ -2.08
SPDEFO95238 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SPDEFO95238 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SPDEFO95238 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SPDEFO95238 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SPDEFO95238 RNU6-268P-201ENST00000364174 107 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 Y_RNA.336-201ENST00000365307 109 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 RNU6-476P-201ENST00000384726 107 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 SNORA40.5-201ENST00000391061 128 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 COTL1P1-201ENST00000422309 375 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 AC069257.2-201ENST00000441819 155 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 STAG3L5P-204ENST00000443759 179 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 SNORD109B-201ENST00000458961 67 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 SNORD109A-201ENST00000459128 67 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 RNU5E-3P-201ENST00000515913 68 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 RNU6-1061P-201ENST00000516530 99 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 GTF3AP2-201ENST00000557014 266 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 AC133485.4-201ENST00000561835 220 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 AC138907.4-201ENST00000570107 226 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 MIR3200-201ENST00000580767 85 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 U6.95-201ENST00000636931 70 ntBASIC2.06□□□□□ -2.08
SPDEFO95238 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SPDEFO95238 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SPDEFO95238 AL359851.1-201ENST00000569460 4997 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 RNU6-44P-201ENST00000384045 107 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 RNU6-1144P-201ENST00000384247 104 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 MIR518A2-201ENST00000384966 87 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SPDEFO95238 RNA5SP465-201ENST00000391195 109 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.05□□□□□ -2.08
SPDEFO95238 HMGN2P32-201ENST00000444648 269 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.05□□□□□ -2.08
SPDEFO95238 SNORA31.10-201ENST00000516482 106 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 RNU7-25P-201ENST00000516544 62 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 RNU6-1149P-201ENST00000516810 97 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 SCARNA15-202ENST00000516881 127 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 AC007336.1-201ENST00000576365 3828 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 MIR5197-201ENST00000583721 112 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 SNORA28-201ENST00000606769 126 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 AC134878.1-201ENST00000619901 243 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 U4.3-201ENST00000621047 82 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 MIR376A2-201ENST00000636782 80 ntBASIC2.05□□□□□ -2.08
SPDEFO95238 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SPDEFO95238 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SPDEFO95238 SNORD58C-201ENST00000365223 64 ntBASIC2.04□□□□□ -2.08
SPDEFO95238 Y_RNA.410-201ENST00000383992 113 ntBASIC2.04□□□□□ -2.08
SPDEFO95238 RNU6-429P-201ENST00000384582 108 ntBASIC2.04□□□□□ -2.08
SPDEFO95238 Y_RNA.630-201ENST00000411370 108 ntBASIC2.04□□□□□ -2.08
SPDEFO95238 Z92545.1-201ENST00000411782 234 ntBASIC2.04□□□□□ -2.08
SPDEFO95238 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.04□□□□□ -2.08
SPDEFO95238 HMGN2P3-201ENST00000433603 273 ntBASIC2.04□□□□□ -2.08
SPDEFO95238 HMGN2P5-201ENST00000436882 273 ntBASIC2.04□□□□□ -2.08
SPDEFO95238 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SPDEFO95238 AC008555.8-201ENST00000623602 2168 ntBASIC2.03□□□□□ -2.08
SPDEFO95238 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SPDEFO95238 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.03□□□□□ -2.08
SPDEFO95238 MIRLET7C-201ENST00000362160 84 ntBASIC2.03□□□□□ -2.08
SPDEFO95238 RNA5SP456-201ENST00000364002 114 ntBASIC2.03□□□□□ -2.08
SPDEFO95238 SNORA63D-201ENST00000364359 132 ntBASIC2.03□□□□□ -2.08
SPDEFO95238 Y_RNA.547-201ENST00000384654 119 ntBASIC2.03□□□□□ -2.08
SPDEFO95238 HMGN2P39-201ENST00000398005 273 ntBASIC2.03□□□□□ -2.08
SPDEFO95238 RNU2-52P-201ENST00000410680 190 ntBASIC2.03□□□□□ -2.08
SPDEFO95238 AL021397.1-201ENST00000451806 248 ntBASIC2.03□□□□□ -2.08
SPDEFO95238 RNU6-781P-201ENST00000516377 101 ntBASIC2.03□□□□□ -2.08
SPDEFO95238 MIR4287-201ENST00000579398 78 ntBASIC2.03□□□□□ -2.08
SPDEFO95238 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPDEFO95238 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPDEFO95238 MIR21-201ENST00000362134 72 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 SNORD115-28-201ENST00000363931 81 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 MIR27B-201ENST00000385129 97 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 MIRLET7F2-201ENST00000385277 83 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 RN7SKP200-201ENST00000410564 320 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 RNA5SP184-201ENST00000411071 108 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 HSPE1P9-201ENST00000440046 311 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.02□□□□□ -2.09
SPDEFO95238 CYCTP-201ENST00000504253 315 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 AC114811.1-201ENST00000507207 168 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 SNORD33.1-201ENST00000516213 88 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 RNVU1-2-201ENST00000516326 135 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 EIF4BP1-201ENST00000554881 351 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 AL096840.1-201ENST00000603287 93 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 AC108081.1-201ENST00000604358 221 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 MIR6129-201ENST00000616087 109 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 AC006386.2-201ENST00000624491 75 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 AC012005.1-201ENST00000624575 75 ntBASIC2.02□□□□□ -2.09
SPDEFO95238 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SPDEFO95238 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SPDEFO95238 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
SPDEFO95238 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SPDEFO95238 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SPDEFO95238 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SPDEFO95238 AC062016.1-201ENST00000355719 319 ntBASIC2.01□□□□□ -2.09
SPDEFO95238 Y_RNA.37-201ENST00000362606 108 ntBASIC2.01□□□□□ -2.09
SPDEFO95238 RNU6-950P-201ENST00000384651 107 ntBASIC2.01□□□□□ -2.09
SPDEFO95238 SNORA48.1-201ENST00000390879 135 ntBASIC2.01□□□□□ -2.09
SPDEFO95238 AL445646.1-201ENST00000431784 216 ntBASIC2.01□□□□□ -2.09
SPDEFO95238 RNA5SP356-201ENST00000515972 94 ntBASIC2.01□□□□□ -2.09
SPDEFO95238 RN7SKP132-201ENST00000516001 208 ntBASIC2.01□□□□□ -2.09
SPDEFO95238 RN7SKP19-201ENST00000516016 252 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 974.2 ms