Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC61Q9Y6R9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 MIR422A-201ENST00000362286 90 ntBASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 MIRLET7A1-201ENST00000362295 80 ntBASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 SNORA26.6-201ENST00000391256 115 ntBASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 SRIP3-201ENST00000413200 219 ntBASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 RNU7-67P-201ENST00000459003 62 ntBASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 RN7SL297P-201ENST00000483161 293 ntBASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 RNU6-826P-201ENST00000516827 104 ntBASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 RNU6-958P-201ENST00000516995 106 ntBASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 MIR6717-201ENST00000622747 73 ntBASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC61Q9Y6R9 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 RNU1-70P-201ENST00000362618 164 ntBASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 Y_RNA.510-201ENST00000384511 114 ntBASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 AC015922.2-201ENST00000435593 184 ntBASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 TRBV12-1-201ENST00000479785 344 ntBASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 SNORA31.1-201ENST00000515993 133 ntBASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 SNORA31.5-201ENST00000516190 133 ntBASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 AC007536.1-201ENST00000533382 349 ntBASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.53□□□□□ -1.68
CCDC61Q9Y6R9 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 Y_RNA.173-201ENST00000363776 113 ntBASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 RNU6-649P-201ENST00000384463 107 ntBASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 RNU6-1307P-201ENST00000391012 103 ntBASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 ATP5J2P3-201ENST00000451550 258 ntBASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 CKS1BP2-201ENST00000497342 240 ntBASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 RNU6-448P-201ENST00000517052 107 ntBASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 MIR5739-201ENST00000619803 80 ntBASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 AC006111.3-201ENST00000622137 383 ntBASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC61Q9Y6R9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 SNORA80A-201ENST00000363922 136 ntBASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 MIR1289-1-201ENST00000408836 144 ntBASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 TRIAP1P1-201ENST00000427062 225 ntBASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 AC245047.3-201ENST00000429428 127 ntBASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 RN7SL863P-201ENST00000462370 296 ntBASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 RN7SL636P-201ENST00000497504 294 ntBASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 MTND5P40-201ENST00000559945 246 ntBASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 AL360157.1-201ENST00000565962 87 ntBASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 MIR6852-201ENST00000621699 66 ntBASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 AC027279.3-201ENST00000625055 122 ntBASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC61Q9Y6R9 RNA5SP138-201ENST00000365098 114 ntBASIC4.5□□□□□ -1.69
CCDC61Q9Y6R9 Y_RNA.386-201ENST00000383913 105 ntBASIC4.5□□□□□ -1.69
CCDC61Q9Y6R9 Y_RNA.448-201ENST00000384185 108 ntBASIC4.5□□□□□ -1.69
CCDC61Q9Y6R9 SNORA44-201ENST00000384584 132 ntBASIC4.5□□□□□ -1.69
CCDC61Q9Y6R9 CST2P1-201ENST00000425770 87 ntBASIC4.5□□□□□ -1.69
CCDC61Q9Y6R9 MIR2682-201ENST00000580305 110 ntBASIC4.5□□□□□ -1.69
CCDC61Q9Y6R9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC61Q9Y6R9 AC012676.2-201ENST00000619258 186 ntBASIC4.5□□□□□ -1.69
CCDC61Q9Y6R9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.5□□□□□ -1.69
CCDC61Q9Y6R9 AC087499.7-201ENST00000441958 109 ntBASIC4.49□□□□□ -1.69
CCDC61Q9Y6R9 RNU6-634P-201ENST00000459134 106 ntBASIC4.49□□□□□ -1.69
CCDC61Q9Y6R9 SCARNA17.1-201ENST00000516211 143 ntBASIC4.49□□□□□ -1.69
CCDC61Q9Y6R9 SCARNA17.2-201ENST00000516334 143 ntBASIC4.49□□□□□ -1.69
CCDC61Q9Y6R9 Y_RNA.681-201ENST00000516445 113 ntBASIC4.49□□□□□ -1.69
CCDC61Q9Y6R9 MIR4791-201ENST00000607666 84 ntBASIC4.49□□□□□ -1.69
CCDC61Q9Y6R9 SCARNA17.4-201ENST00000614296 143 ntBASIC4.49□□□□□ -1.69
CCDC61Q9Y6R9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.49□□□□□ -1.69
CCDC61Q9Y6R9 CEP170P1-201ENST00000502249 4587 ntBASIC4.49□□□□□ -1.69
CCDC61Q9Y6R9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CCDC61Q9Y6R9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC61Q9Y6R9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC61Q9Y6R9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC61Q9Y6R9 Y_RNA.370-201ENST00000365589 108 ntBASIC4.48□□□□□ -1.69
CCDC61Q9Y6R9 SNORA7.4-201ENST00000384249 137 ntBASIC4.48□□□□□ -1.69
CCDC61Q9Y6R9 COTL1P1-201ENST00000422309 375 ntBASIC4.48□□□□□ -1.69
CCDC61Q9Y6R9 CYP2C59P-201ENST00000457790 269 ntBASIC4.48□□□□□ -1.69
CCDC61Q9Y6R9 AL033523.1-201ENST00000605153 153 ntBASIC4.48□□□□□ -1.69
CCDC61Q9Y6R9 AC020891.4-201ENST00000605745 93 ntBASIC4.48□□□□□ -1.69
CCDC61Q9Y6R9 AC006386.2-201ENST00000624491 75 ntBASIC4.48□□□□□ -1.69
CCDC61Q9Y6R9 AC012005.1-201ENST00000624575 75 ntBASIC4.48□□□□□ -1.69
CCDC61Q9Y6R9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC61Q9Y6R9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC61Q9Y6R9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC61Q9Y6R9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC61Q9Y6R9 SNORA25.9-201ENST00000365087 128 ntBASIC4.47□□□□□ -1.69
CCDC61Q9Y6R9 RNU1-89P-201ENST00000384592 164 ntBASIC4.47□□□□□ -1.69
CCDC61Q9Y6R9 RPS29P29-201ENST00000456396 171 ntBASIC4.47□□□□□ -1.69
CCDC61Q9Y6R9 Y_RNA.660-201ENST00000516002 120 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 198.1 ms