Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 SNORA72.4-201ENST00000384174 132 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 MIR520G-201ENST00000385064 90 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 AC024067.1-201ENST00000426199 223 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 CALM2P4-201ENST00000430810 426 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 SNRPGP13-201ENST00000442212 177 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 AC079140.2-201ENST00000506193 142 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 RNU7-115P-201ENST00000516433 55 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 RNU2-56P-201ENST00000516826 190 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 MIR4643-201ENST00000577473 78 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 SNORA28-201ENST00000606769 126 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 snoU18.1-201ENST00000629629 71 ntBASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.41□□□□□ -2.18
LYSMD4Q5XG99 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
LYSMD4Q5XG99 Y_RNA.265-201ENST00000364677 108 ntBASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 RNU6-740P-201ENST00000364734 105 ntBASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 RNU6-53P-201ENST00000365367 106 ntBASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 RNU6-42P-201ENST00000384165 107 ntBASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 MIR513A1-201ENST00000385138 129 ntBASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 BTF3P11-201ENST00000426582 477 ntBASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 AL049830.1-201ENST00000468034 425 ntBASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 OR9P1P-201ENST00000496431 281 ntBASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 SNORA27.4-201ENST00000516650 95 ntBASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 AP002004.2-201ENST00000531656 154 ntBASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 AL162730.1-201ENST00000605734 292 ntBASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 AL008718.3-201ENST00000610217 321 ntBASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 AL591926.4-201ENST00000616895 298 ntBASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
LYSMD4Q5XG99 SNORD33-201ENST00000362761 85 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 U8.1-201ENST00000362843 134 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.217-201ENST00000364214 105 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 RNU4-10P-201ENST00000364383 140 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 RNU6-1323P-201ENST00000384025 107 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.477-201ENST00000384352 108 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 U8.16-201ENST00000391279 133 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 AC093850.1-201ENST00000454121 251 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 SNORD127-201ENST00000458892 86 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.641-201ENST00000459414 105 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 RPL23AP54-201ENST00000495129 419 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 RNA5SP220-201ENST00000516298 104 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.680-201ENST00000516441 93 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 RNU6-902P-201ENST00000517212 91 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 AC019176.1-201ENST00000518519 225 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 SUMO2P16-201ENST00000519475 264 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 AC005357.1-201ENST00000588399 301 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 AP003357.1-201ENST00000604497 148 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 AC073349.3-201ENST00000617616 186 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 MIR548AY-201ENST00000617669 107 ntBASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
LYSMD4Q5XG99 RNU6-1272P-201ENST00000362776 107 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 SNORD68-201ENST00000363214 84 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 SNORD114-22-201ENST00000365423 72 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 RNA5SP259-201ENST00000365541 109 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 RNU6-514P-201ENST00000384208 107 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 SNORA72-201ENST00000384339 132 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 RNU6-1289P-201ENST00000384431 106 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 SNORA36B-201ENST00000410438 131 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 RNU6-383P-201ENST00000410864 94 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 MLLT10P1-201ENST00000418346 262 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 PGBD4P5-201ENST00000445958 426 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 MTND1P19-201ENST00000511780 315 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 RNA5SP168-201ENST00000516642 112 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 RNU7-28P-201ENST00000516759 62 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 MIR4778-201ENST00000577635 80 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 MIR3937-201ENST00000580135 106 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 AC037487.3-201ENST00000606668 112 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 AL121890.5-201ENST00000620848 304 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 MIR6734-201ENST00000621166 68 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 AL513423.1-201ENST00000621695 132 ntBASIC1.38□□□□□ -2.19
LYSMD4Q5XG99 MIRLET7C-201ENST00000362160 84 ntBASIC1.37□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.44-201ENST00000362676 108 ntBASIC1.37□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.193-201ENST00000363979 102 ntBASIC1.37□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.253-201ENST00000364562 112 ntBASIC1.37□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.277-201ENST00000364754 102 ntBASIC1.37□□□□□ -2.19
LYSMD4Q5XG99 RNA5SP363-201ENST00000365072 115 ntBASIC1.37□□□□□ -2.19
LYSMD4Q5XG99 RNU6-196P-201ENST00000384315 107 ntBASIC1.37□□□□□ -2.19
LYSMD4Q5XG99 AL603910.2-201ENST00000407268 136 ntBASIC1.37□□□□□ -2.19
LYSMD4Q5XG99 AC027119.1-201ENST00000440877 241 ntBASIC1.37□□□□□ -2.19
LYSMD4Q5XG99 AC127455.1-201ENST00000565496 145 ntBASIC1.37□□□□□ -2.19
LYSMD4Q5XG99 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.37□□□□□ -2.19
LYSMD4Q5XG99 SNORD3E-202ENST00000627253 216 ntBASIC1.37□□□□□ -2.19
LYSMD4Q5XG99 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
LYSMD4Q5XG99 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.54-201ENST00000362766 105 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.144-201ENST00000363521 113 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.275-201ENST00000364726 110 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 RNU6-997P-201ENST00000384725 107 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 Y_RNA.572-201ENST00000384757 98 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 snosnR66.1-201ENST00000391095 99 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 PIGPP3-201ENST00000425307 415 ntBASIC1.36□□□□□ -2.19
LYSMD4Q5XG99 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms