Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 RNU6-1084P-201ENST00000362498 107 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 SNORD45.3-201ENST00000363836 72 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 RNU6-296P-201ENST00000384608 107 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 RNU6-950P-201ENST00000384651 107 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 RNA5SP482-201ENST00000391269 118 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 RNA5SP100-201ENST00000410903 110 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 RNA5SP59-201ENST00000410922 110 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 AC011753.1-201ENST00000451001 220 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.07□□□□□ -2.08
RLIMQ9NVW2 RNA5SP281-201ENST00000516504 135 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 RNU7-149P-201ENST00000516739 59 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 SNORA31.17-201ENST00000516953 127 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 SNORA28-201ENST00000606769 126 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.07□□□□□ -2.08
RLIMQ9NVW2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RLIMQ9NVW2 RNU6-312P-201ENST00000364629 107 ntBASIC2.06□□□□□ -2.08
RLIMQ9NVW2 RNY3P5-201ENST00000384127 102 ntBASIC2.06□□□□□ -2.08
RLIMQ9NVW2 MIR522-201ENST00000385071 87 ntBASIC2.06□□□□□ -2.08
RLIMQ9NVW2 AL034345.1-201ENST00000407768 123 ntBASIC2.06□□□□□ -2.08
RLIMQ9NVW2 SNORA79-201ENST00000408376 140 ntBASIC2.06□□□□□ -2.08
RLIMQ9NVW2 OR9P1P-201ENST00000496431 281 ntBASIC2.06□□□□□ -2.08
RLIMQ9NVW2 MIR4709-201ENST00000577272 72 ntBASIC2.06□□□□□ -2.08
RLIMQ9NVW2 MIR3124-201ENST00000582636 67 ntBASIC2.06□□□□□ -2.08
RLIMQ9NVW2 Pinc.1-201ENST00000616452 154 ntBASIC2.06□□□□□ -2.08
RLIMQ9NVW2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RLIMQ9NVW2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
RLIMQ9NVW2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RLIMQ9NVW2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
RLIMQ9NVW2 Y_RNA.432-201ENST00000384087 111 ntBASIC2.05□□□□□ -2.08
RLIMQ9NVW2 RNU6-804P-201ENST00000384286 107 ntBASIC2.05□□□□□ -2.08
RLIMQ9NVW2 SNORA67.4-201ENST00000384688 142 ntBASIC2.05□□□□□ -2.08
RLIMQ9NVW2 SNRPGP8-201ENST00000454064 226 ntBASIC2.05□□□□□ -2.08
RLIMQ9NVW2 snoU13.27-201ENST00000459278 104 ntBASIC2.05□□□□□ -2.08
RLIMQ9NVW2 RNU6-1299P-201ENST00000516316 100 ntBASIC2.05□□□□□ -2.08
RLIMQ9NVW2 RNU7-28P-201ENST00000516759 62 ntBASIC2.05□□□□□ -2.08
RLIMQ9NVW2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.05□□□□□ -2.08
RLIMQ9NVW2 MIR5694-201ENST00000581190 76 ntBASIC2.05□□□□□ -2.08
RLIMQ9NVW2 MIR4672-201ENST00000583126 81 ntBASIC2.05□□□□□ -2.08
RLIMQ9NVW2 MIR6895-201ENST00000613497 78 ntBASIC2.05□□□□□ -2.08
RLIMQ9NVW2 AP000553.5-201ENST00000641933 54 ntBASIC2.05□□□□□ -2.08
RLIMQ9NVW2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
RLIMQ9NVW2 RNU6-1062P-201ENST00000383908 107 ntBASIC2.04□□□□□ -2.08
RLIMQ9NVW2 RNU6-163P-201ENST00000384396 106 ntBASIC2.04□□□□□ -2.08
RLIMQ9NVW2 MIR221-201ENST00000385135 110 ntBASIC2.04□□□□□ -2.08
RLIMQ9NVW2 SNORD72-201ENST00000390994 80 ntBASIC2.04□□□□□ -2.08
RLIMQ9NVW2 RNU2-70P-201ENST00000410718 179 ntBASIC2.04□□□□□ -2.08
RLIMQ9NVW2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.04□□□□□ -2.08
RLIMQ9NVW2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.04□□□□□ -2.08
RLIMQ9NVW2 MRPS17P9-201ENST00000511924 393 ntBASIC2.04□□□□□ -2.08
RLIMQ9NVW2 SNORD77.4-201ENST00000516158 81 ntBASIC2.04□□□□□ -2.08
RLIMQ9NVW2 RNA5SP481-201ENST00000516814 122 ntBASIC2.04□□□□□ -2.08
RLIMQ9NVW2 RNU6-1116P-201ENST00000517269 99 ntBASIC2.04□□□□□ -2.08
RLIMQ9NVW2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.04□□□□□ -2.08
RLIMQ9NVW2 MIR4431-201ENST00000579990 94 ntBASIC2.04□□□□□ -2.08
RLIMQ9NVW2 MIR5002-201ENST00000584713 97 ntBASIC2.04□□□□□ -2.08
RLIMQ9NVW2 AC021753.1-201ENST00000635724 168 ntBASIC2.04□□□□□ -2.08
RLIMQ9NVW2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RLIMQ9NVW2 MIR449A-201ENST00000362113 91 ntBASIC2.03□□□□□ -2.08
RLIMQ9NVW2 Y_RNA.272-201ENST00000364696 102 ntBASIC2.03□□□□□ -2.08
RLIMQ9NVW2 SNORD116-18-201ENST00000383961 92 ntBASIC2.03□□□□□ -2.08
RLIMQ9NVW2 RNU6-643P-201ENST00000384018 107 ntBASIC2.03□□□□□ -2.08
RLIMQ9NVW2 RNA5SP338-201ENST00000410495 85 ntBASIC2.03□□□□□ -2.08
RLIMQ9NVW2 CALM2P4-201ENST00000430810 426 ntBASIC2.03□□□□□ -2.08
RLIMQ9NVW2 RN7SL429P-201ENST00000479090 223 ntBASIC2.03□□□□□ -2.08
RLIMQ9NVW2 RN7SL489P-201ENST00000486185 223 ntBASIC2.03□□□□□ -2.08
RLIMQ9NVW2 RN7SL327P-201ENST00000488659 223 ntBASIC2.03□□□□□ -2.08
RLIMQ9NVW2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.03□□□□□ -2.08
RLIMQ9NVW2 AC107027.2-201ENST00000512197 115 ntBASIC2.03□□□□□ -2.08
RLIMQ9NVW2 RN7SL853P-201ENST00000617250 223 ntBASIC2.03□□□□□ -2.08
RLIMQ9NVW2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.03□□□□□ -2.08
RLIMQ9NVW2 AC009831.4-201ENST00000620744 325 ntBASIC2.03□□□□□ -2.08
RLIMQ9NVW2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.03□□□□□ -2.08
RLIMQ9NVW2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
RLIMQ9NVW2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RLIMQ9NVW2 SNORD14E-201ENST00000364009 85 ntBASIC2.02□□□□□ -2.09
RLIMQ9NVW2 SNORD50B-201ENST00000364995 70 ntBASIC2.02□□□□□ -2.09
RLIMQ9NVW2 snoU2-30.1-201ENST00000365012 70 ntBASIC2.02□□□□□ -2.09
RLIMQ9NVW2 RNU6-1031P-201ENST00000384773 107 ntBASIC2.02□□□□□ -2.09
RLIMQ9NVW2 MIR144-201ENST00000384886 86 ntBASIC2.02□□□□□ -2.09
RLIMQ9NVW2 RNU6-1135P-201ENST00000411083 103 ntBASIC2.02□□□□□ -2.09
RLIMQ9NVW2 FTH1P12-201ENST00000432137 551 ntBASIC2.02□□□□□ -2.09
RLIMQ9NVW2 AC008507.4-201ENST00000585464 127 ntBASIC2.02□□□□□ -2.09
RLIMQ9NVW2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
RLIMQ9NVW2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RLIMQ9NVW2 Y_RNA.91-201ENST00000363042 107 ntBASIC2.01□□□□□ -2.09
RLIMQ9NVW2 RNU4-84P-201ENST00000364200 139 ntBASIC2.01□□□□□ -2.09
RLIMQ9NVW2 Y_RNA.398-201ENST00000383952 99 ntBASIC2.01□□□□□ -2.09
RLIMQ9NVW2 RNU6-484P-201ENST00000384016 107 ntBASIC2.01□□□□□ -2.09
RLIMQ9NVW2 RNU6-301P-201ENST00000384277 107 ntBASIC2.01□□□□□ -2.09
RLIMQ9NVW2 Y_RNA.464-201ENST00000384282 110 ntBASIC2.01□□□□□ -2.09
RLIMQ9NVW2 Y_RNA.521-201ENST00000384560 114 ntBASIC2.01□□□□□ -2.09
RLIMQ9NVW2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.01□□□□□ -2.09
RLIMQ9NVW2 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
RLIMQ9NVW2 AC114811.1-201ENST00000507207 168 ntBASIC2.01□□□□□ -2.09
RLIMQ9NVW2 SNORD45.4-201ENST00000516629 73 ntBASIC2.01□□□□□ -2.09
RLIMQ9NVW2 RNU6-255P-201ENST00000516957 105 ntBASIC2.01□□□□□ -2.09
RLIMQ9NVW2 MIR3144-201ENST00000579460 79 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms