Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 AP006437.1-201ENST00000641440 3685 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 RNU6-32P-201ENST00000383948 107 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 RNU6-442P-201ENST00000383968 104 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 RNU6-13P-201ENST00000384248 107 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 RNU6-12P-201ENST00000384604 107 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 RNU6-41P-201ENST00000384741 107 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 RNA5SP89-201ENST00000410300 108 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 COTL1P1-201ENST00000422309 375 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 IGKV1-22-201ENST00000524313 326 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 MIR3169-201ENST00000578032 83 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 MIR5197-201ENST00000583721 112 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 AC005786.1-201ENST00000588553 154 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 MIR622-201ENST00000638396 96 ntBASIC2.98□□□□□ -1.93
TRIM56Q9BRZ2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 MIR422A-201ENST00000362286 90 ntBASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 RNU6-23P-201ENST00000363283 107 ntBASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 SNORD14E-201ENST00000364009 85 ntBASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 Y_RNA.410-201ENST00000383992 113 ntBASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 MIR570-201ENST00000384917 97 ntBASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 MIR518F-201ENST00000384973 87 ntBASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 UBBP3-201ENST00000445497 241 ntBASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 RNA5SP137-201ENST00000516833 135 ntBASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 SCARNA15-202ENST00000516881 127 ntBASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 AL137067.1-201ENST00000615933 120 ntBASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TRIM56Q9BRZ2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
TRIM56Q9BRZ2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM56Q9BRZ2 Y_RNA.116-201ENST00000363292 103 ntBASIC2.96□□□□□ -1.94
TRIM56Q9BRZ2 MIR548O-201ENST00000408583 114 ntBASIC2.96□□□□□ -1.94
TRIM56Q9BRZ2 AL109933.2-201ENST00000452651 260 ntBASIC2.96□□□□□ -1.94
TRIM56Q9BRZ2 COX6CP6-201ENST00000490840 228 ntBASIC2.96□□□□□ -1.94
TRIM56Q9BRZ2 Y_RNA.694-201ENST00000516677 117 ntBASIC2.96□□□□□ -1.94
TRIM56Q9BRZ2 AC134878.1-201ENST00000619901 243 ntBASIC2.96□□□□□ -1.94
TRIM56Q9BRZ2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM56Q9BRZ2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 RNU1-58P-201ENST00000362413 163 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 SNORD68-201ENST00000363214 84 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 SNORA33-201ENST00000363664 130 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 SNORA38-201ENST00000363946 132 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 SNORD56.5-201ENST00000364281 72 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 U8.5-201ENST00000364528 136 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 Y_RNA.281-201ENST00000364774 94 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 snoU2-30.1-201ENST00000365012 70 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 SNORD88.1-201ENST00000408684 91 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 CALM2P4-201ENST00000430810 426 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 MIR3126-201ENST00000577443 74 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 MIR4762-201ENST00000585261 75 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 AL161431.1-201ENST00000618966 4205 ntBASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM56Q9BRZ2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
TRIM56Q9BRZ2 RNU6-1084P-201ENST00000362498 107 ntBASIC2.94□□□□□ -1.94
TRIM56Q9BRZ2 SNORA44-201ENST00000384584 132 ntBASIC2.94□□□□□ -1.94
TRIM56Q9BRZ2 AC107083.1-201ENST00000439643 279 ntBASIC2.94□□□□□ -1.94
TRIM56Q9BRZ2 RPS29P24-201ENST00000486345 171 ntBASIC2.94□□□□□ -1.94
TRIM56Q9BRZ2 AL163195.1-201ENST00000496941 348 ntBASIC2.94□□□□□ -1.94
TRIM56Q9BRZ2 uc_338.28-201ENST00000612082 187 ntBASIC2.94□□□□□ -1.94
TRIM56Q9BRZ2 AC006441.5-201ENST00000612680 209 ntBASIC2.94□□□□□ -1.94
TRIM56Q9BRZ2 CTSLP2-204ENST00000629029 392 ntBASIC2.94□□□□□ -1.94
TRIM56Q9BRZ2 MIR6733-201ENST00000635723 61 ntBASIC2.94□□□□□ -1.94
TRIM56Q9BRZ2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 RNU6-862P-201ENST00000362804 105 ntBASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 SNORA80A-201ENST00000363922 136 ntBASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 RNU6-1189P-201ENST00000383958 107 ntBASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 Y_RNA.495-201ENST00000384435 112 ntBASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 RNA5SP482-201ENST00000391269 118 ntBASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 RPS26P48-201ENST00000491713 339 ntBASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 RNU7-28P-201ENST00000516759 62 ntBASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 AC007012.1-201ENST00000567192 175 ntBASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 AC006254.2-201ENST00000603259 279 ntBASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TRIM56Q9BRZ2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 MIR450A1-201ENST00000362262 91 ntBASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 Y_RNA.366-201ENST00000365540 102 ntBASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 RNU1-148P-201ENST00000384472 162 ntBASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 AL590004.2-201ENST00000404787 371 ntBASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 AC069257.2-201ENST00000441819 155 ntBASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 RNU7-26P-201ENST00000458980 63 ntBASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 RNU7-70P-201ENST00000516941 66 ntBASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 RNU6-56P-201ENST00000516986 93 ntBASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 AC004486.1-201ENST00000546846 233 ntBASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
TRIM56Q9BRZ2 RNU6-1107P-201ENST00000364817 104 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms