Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 RNA5SP481-201ENST00000516814 122 ntBASIC3.15□□□□□ -1.91
CALR3Q96L12 SCARNA15-202ENST00000516881 127 ntBASIC3.15□□□□□ -1.91
CALR3Q96L12 AC133485.4-201ENST00000561835 220 ntBASIC3.15□□□□□ -1.91
CALR3Q96L12 AC138907.4-201ENST00000570107 226 ntBASIC3.15□□□□□ -1.91
CALR3Q96L12 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.15□□□□□ -1.91
CALR3Q96L12 AC015726.2-201ENST00000620112 122 ntBASIC3.15□□□□□ -1.91
CALR3Q96L12 AC096644.4-201ENST00000563417 2912 ntBASIC3.15□□□□□ -1.91
CALR3Q96L12 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CALR3Q96L12 RNU6-851P-201ENST00000384565 107 ntBASIC3.14□□□□□ -1.91
CALR3Q96L12 MIR449B-201ENST00000384995 97 ntBASIC3.14□□□□□ -1.91
CALR3Q96L12 SNORD67-201ENST00000390833 111 ntBASIC3.14□□□□□ -1.91
CALR3Q96L12 AL590004.2-201ENST00000404787 371 ntBASIC3.14□□□□□ -1.91
CALR3Q96L12 SUMO1P4-201ENST00000429430 302 ntBASIC3.14□□□□□ -1.91
CALR3Q96L12 Y_RNA.651-201ENST00000459380 103 ntBASIC3.14□□□□□ -1.91
CALR3Q96L12 AC091153.1-201ENST00000466297 402 ntBASIC3.14□□□□□ -1.91
CALR3Q96L12 SCARNA16.3-201ENST00000516595 184 ntBASIC3.14□□□□□ -1.91
CALR3Q96L12 SNORA31.15-201ENST00000516771 132 ntBASIC3.14□□□□□ -1.91
CALR3Q96L12 MIR5680-201ENST00000577577 84 ntBASIC3.14□□□□□ -1.91
CALR3Q96L12 UBL5P2-201ENST00000583788 219 ntBASIC3.14□□□□□ -1.91
CALR3Q96L12 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.14□□□□□ -1.91
CALR3Q96L12 AC007318.2-201ENST00000620999 243 ntBASIC3.14□□□□□ -1.91
CALR3Q96L12 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CALR3Q96L12 RNU6-833P-201ENST00000363486 107 ntBASIC3.13□□□□□ -1.91
CALR3Q96L12 SNORA9.2-201ENST00000365361 133 ntBASIC3.13□□□□□ -1.91
CALR3Q96L12 RNA5SP450-201ENST00000411206 102 ntBASIC3.13□□□□□ -1.91
CALR3Q96L12 AC007064.1-201ENST00000412238 351 ntBASIC3.13□□□□□ -1.91
CALR3Q96L12 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.13□□□□□ -1.91
CALR3Q96L12 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.13□□□□□ -1.91
CALR3Q96L12 AL021397.1-201ENST00000451806 248 ntBASIC3.13□□□□□ -1.91
CALR3Q96L12 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.13□□□□□ -1.91
CALR3Q96L12 RNU6-1061P-201ENST00000516530 99 ntBASIC3.13□□□□□ -1.91
CALR3Q96L12 RNU7-193P-201ENST00000516723 65 ntBASIC3.13□□□□□ -1.91
CALR3Q96L12 MIR376A2-201ENST00000636782 80 ntBASIC3.13□□□□□ -1.91
CALR3Q96L12 MIR3914-2-201ENST00000637339 95 ntBASIC3.13□□□□□ -1.91
CALR3Q96L12 ICE2P2-201ENST00000483823 2787 ntBASIC3.13□□□□□ -1.91
CALR3Q96L12 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.13□□□□□ -1.91
CALR3Q96L12 RNU6-1056P-201ENST00000383996 107 ntBASIC3.12□□□□□ -1.91
CALR3Q96L12 SNORD20-201ENST00000384550 80 ntBASIC3.12□□□□□ -1.91
CALR3Q96L12 Y_RNA.617-201ENST00000410920 90 ntBASIC3.12□□□□□ -1.91
CALR3Q96L12 AC087499.4-201ENST00000448505 178 ntBASIC3.12□□□□□ -1.91
CALR3Q96L12 RNU7-34P-201ENST00000459394 64 ntBASIC3.12□□□□□ -1.91
CALR3Q96L12 RNU7-12P-201ENST00000516030 62 ntBASIC3.12□□□□□ -1.91
CALR3Q96L12 RNU6-113P-201ENST00000516653 101 ntBASIC3.12□□□□□ -1.91
CALR3Q96L12 RNU6-826P-201ENST00000516827 104 ntBASIC3.12□□□□□ -1.91
CALR3Q96L12 AC023632.4-201ENST00000517783 191 ntBASIC3.12□□□□□ -1.91
CALR3Q96L12 MIR4709-201ENST00000577272 72 ntBASIC3.12□□□□□ -1.91
CALR3Q96L12 ZNF861P-201ENST00000588126 639 ntBASIC3.12□□□□□ -1.91
CALR3Q96L12 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CALR3Q96L12 SNORA2.2-201ENST00000365473 135 ntBASIC3.11□□□□□ -1.91
CALR3Q96L12 AC105272.1-201ENST00000438604 198 ntBASIC3.11□□□□□ -1.91
CALR3Q96L12 snoU13.27-201ENST00000459278 104 ntBASIC3.11□□□□□ -1.91
CALR3Q96L12 SNORA9.3-201ENST00000516383 129 ntBASIC3.11□□□□□ -1.91
CALR3Q96L12 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.11□□□□□ -1.91
CALR3Q96L12 MIR5004-201ENST00000579078 107 ntBASIC3.11□□□□□ -1.91
CALR3Q96L12 AC010297.1-201ENST00000623948 149 ntBASIC3.11□□□□□ -1.91
CALR3Q96L12 U6.95-201ENST00000636931 70 ntBASIC3.11□□□□□ -1.91
CALR3Q96L12 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CALR3Q96L12 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CALR3Q96L12 RNU6-215P-201ENST00000365169 102 ntBASIC3.1□□□□□ -1.91
CALR3Q96L12 MIR512-1-201ENST00000384913 84 ntBASIC3.1□□□□□ -1.91
CALR3Q96L12 MIR183-201ENST00000384958 110 ntBASIC3.1□□□□□ -1.91
CALR3Q96L12 AC005326.1-201ENST00000429197 123 ntBASIC3.1□□□□□ -1.91
CALR3Q96L12 AC015922.2-201ENST00000435593 184 ntBASIC3.1□□□□□ -1.91
CALR3Q96L12 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.1□□□□□ -1.91
CALR3Q96L12 RNU6-830P-201ENST00000516353 107 ntBASIC3.1□□□□□ -1.91
CALR3Q96L12 SNORD36C-201ENST00000516733 66 ntBASIC3.1□□□□□ -1.91
CALR3Q96L12 AP003484.1-201ENST00000530974 250 ntBASIC3.1□□□□□ -1.91
CALR3Q96L12 AL161756.2-201ENST00000604597 246 ntBASIC3.1□□□□□ -1.91
CALR3Q96L12 MIR7975-201ENST00000619350 68 ntBASIC3.1□□□□□ -1.91
CALR3Q96L12 AC091953.5-201ENST00000622919 233 ntBASIC3.1□□□□□ -1.91
CALR3Q96L12 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.1□□□□□ -1.91
CALR3Q96L12 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.09□□□□□ -1.91
CALR3Q96L12 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.09□□□□□ -1.91
CALR3Q96L12 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.09□□□□□ -1.91
CALR3Q96L12 SNORA62.3-201ENST00000365110 153 ntBASIC3.09□□□□□ -1.91
CALR3Q96L12 RNU1-138P-201ENST00000384093 164 ntBASIC3.09□□□□□ -1.91
CALR3Q96L12 AL049779.4-201ENST00000604500 156 ntBASIC3.09□□□□□ -1.91
CALR3Q96L12 U6.105-201ENST00000637379 88 ntBASIC3.09□□□□□ -1.91
CALR3Q96L12 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CALR3Q96L12 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.08□□□□□ -1.92
CALR3Q96L12 Y_RNA.81-201ENST00000362997 102 ntBASIC3.08□□□□□ -1.92
CALR3Q96L12 SNORA71.1-201ENST00000364523 117 ntBASIC3.08□□□□□ -1.92
CALR3Q96L12 SNORD58C-201ENST00000365223 64 ntBASIC3.08□□□□□ -1.92
CALR3Q96L12 RNU6-1064P-201ENST00000410626 104 ntBASIC3.08□□□□□ -1.92
CALR3Q96L12 RNA5SP100-201ENST00000410903 110 ntBASIC3.08□□□□□ -1.92
CALR3Q96L12 RNA5SP59-201ENST00000410922 110 ntBASIC3.08□□□□□ -1.92
CALR3Q96L12 RNU6-938P-201ENST00000411285 103 ntBASIC3.08□□□□□ -1.92
CALR3Q96L12 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.08□□□□□ -1.92
CALR3Q96L12 MIR3605-201ENST00000583214 100 ntBASIC3.08□□□□□ -1.92
CALR3Q96L12 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.08□□□□□ -1.92
CALR3Q96L12 AC021506.2-201ENST00000612354 169 ntBASIC3.08□□□□□ -1.92
CALR3Q96L12 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.08□□□□□ -1.92
CALR3Q96L12 AL442644.1-201ENST00000454390 3105 ntBASIC3.08□□□□□ -1.92
CALR3Q96L12 MIR26A1-201ENST00000362205 77 ntBASIC3.07□□□□□ -1.92
CALR3Q96L12 RNU6-1325P-201ENST00000364905 105 ntBASIC3.07□□□□□ -1.92
CALR3Q96L12 RN7SKP19-201ENST00000516016 252 ntBASIC3.07□□□□□ -1.92
CALR3Q96L12 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.07□□□□□ -1.92
CALR3Q96L12 AC245884.12-201ENST00000615364 59 ntBASIC3.07□□□□□ -1.92
CALR3Q96L12 AL513423.1-201ENST00000621695 132 ntBASIC3.07□□□□□ -1.92
CALR3Q96L12 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms