Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC099677.2-201ENST00000436385 175 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 AL445687.1-201ENST00000439946 251 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 TRBV12-1-201ENST00000479785 344 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 RNA5SP281-201ENST00000516504 135 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
IFT43Q96FT9 AL449363.1-201ENST00000617815 186 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
IFT43Q96FT9 CTSLP2-204ENST00000629029 392 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 MIR376A2-201ENST00000636782 80 ntBASIC3.18□□□□□ -1.9
IFT43Q96FT9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.18□□□□□ -1.9
IFT43Q96FT9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
IFT43Q96FT9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
IFT43Q96FT9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
IFT43Q96FT9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
IFT43Q96FT9 SNORA63.5-201ENST00000363548 123 ntBASIC3.17□□□□□ -1.9
IFT43Q96FT9 U8.5-201ENST00000364528 136 ntBASIC3.17□□□□□ -1.9
IFT43Q96FT9 SNORD15B-201ENST00000384714 146 ntBASIC3.17□□□□□ -1.9
IFT43Q96FT9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
IFT43Q96FT9 MIR887-201ENST00000401258 79 ntBASIC3.17□□□□□ -1.9
IFT43Q96FT9 HMGN2P32-201ENST00000444648 269 ntBASIC3.17□□□□□ -1.9
IFT43Q96FT9 RPL39P34-201ENST00000477141 156 ntBASIC3.17□□□□□ -1.9
IFT43Q96FT9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.17□□□□□ -1.9
IFT43Q96FT9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
IFT43Q96FT9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
IFT43Q96FT9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
IFT43Q96FT9 RNU6-640P-201ENST00000363693 105 ntBASIC3.16□□□□□ -1.9
IFT43Q96FT9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.16□□□□□ -1.9
IFT43Q96FT9 AL049873.1-201ENST00000480540 376 ntBASIC3.16□□□□□ -1.9
IFT43Q96FT9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.16□□□□□ -1.9
IFT43Q96FT9 RNU7-70P-201ENST00000516941 66 ntBASIC3.16□□□□□ -1.9
IFT43Q96FT9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.16□□□□□ -1.9
IFT43Q96FT9 AL035470.1-201ENST00000622571 220 ntBASIC3.16□□□□□ -1.9
IFT43Q96FT9 ZNF720P1-201ENST00000562403 1939 ntBASIC3.16□□□□□ -1.9
IFT43Q96FT9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
IFT43Q96FT9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
IFT43Q96FT9 SNORD115-28-201ENST00000363931 81 ntBASIC3.15□□□□□ -1.91
IFT43Q96FT9 snoU2-30.1-201ENST00000365012 70 ntBASIC3.15□□□□□ -1.91
IFT43Q96FT9 RNU6-690P-201ENST00000365242 106 ntBASIC3.15□□□□□ -1.91
IFT43Q96FT9 RNA5SP482-201ENST00000391269 118 ntBASIC3.15□□□□□ -1.91
IFT43Q96FT9 SNORA59A-201ENST00000459326 152 ntBASIC3.15□□□□□ -1.91
IFT43Q96FT9 RN7SL297P-201ENST00000483161 293 ntBASIC3.15□□□□□ -1.91
IFT43Q96FT9 MIR3169-201ENST00000578032 83 ntBASIC3.15□□□□□ -1.91
IFT43Q96FT9 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.15□□□□□ -1.91
IFT43Q96FT9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
IFT43Q96FT9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.14□□□□□ -1.91
IFT43Q96FT9 RNU6-268P-201ENST00000364174 107 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 U8.6-201ENST00000364939 135 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 Y_RNA.544-201ENST00000384650 113 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 SNRPGP14-201ENST00000435400 219 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.14□□□□□ -1.91
IFT43Q96FT9 SNORA40.13-201ENST00000516379 120 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 RNU7-25P-201ENST00000516544 62 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 SNORD45.4-201ENST00000516629 73 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 RNY4P20-201ENST00000516678 93 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 RNU7-28P-201ENST00000516759 62 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 RNU6-844P-201ENST00000517175 102 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.14□□□□□ -1.91
IFT43Q96FT9 IGKV3-31-201ENST00000523109 329 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 EIF4BP1-201ENST00000554881 351 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 UBL5P2-201ENST00000583788 219 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.14□□□□□ -1.91
IFT43Q96FT9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
IFT43Q96FT9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
IFT43Q96FT9 RNU6-349P-201ENST00000362402 107 ntBASIC3.13□□□□□ -1.91
IFT43Q96FT9 Y_RNA.37-201ENST00000362606 108 ntBASIC3.13□□□□□ -1.91
IFT43Q96FT9 RNU6-23P-201ENST00000363283 107 ntBASIC3.13□□□□□ -1.91
IFT43Q96FT9 Y_RNA.362-201ENST00000365518 110 ntBASIC3.13□□□□□ -1.91
IFT43Q96FT9 Y_RNA.547-201ENST00000384654 119 ntBASIC3.13□□□□□ -1.91
IFT43Q96FT9 MIR627-201ENST00000384979 97 ntBASIC3.13□□□□□ -1.91
IFT43Q96FT9 AL109933.2-201ENST00000452651 260 ntBASIC3.13□□□□□ -1.91
IFT43Q96FT9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.13□□□□□ -1.91
IFT43Q96FT9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.13□□□□□ -1.91
IFT43Q96FT9 SNORA31.26-201ENST00000517250 137 ntBASIC3.13□□□□□ -1.91
IFT43Q96FT9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.13□□□□□ -1.91
IFT43Q96FT9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
IFT43Q96FT9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
IFT43Q96FT9 AC092435.3-201ENST00000565538 3654 ntBASIC3.12□□□□□ -1.91
IFT43Q96FT9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.12□□□□□ -1.91
IFT43Q96FT9 RNU6-414P-201ENST00000363705 104 ntBASIC3.12□□□□□ -1.91
IFT43Q96FT9 SNORD73B-201ENST00000364394 72 ntBASIC3.12□□□□□ -1.91
IFT43Q96FT9 Y_RNA.265-201ENST00000364677 108 ntBASIC3.12□□□□□ -1.91
IFT43Q96FT9 RNU6-294P-201ENST00000364999 102 ntBASIC3.12□□□□□ -1.91
IFT43Q96FT9 Y_RNA.336-201ENST00000365307 109 ntBASIC3.12□□□□□ -1.91
IFT43Q96FT9 SNORD67-201ENST00000390833 111 ntBASIC3.12□□□□□ -1.91
IFT43Q96FT9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.12□□□□□ -1.91
IFT43Q96FT9 COTL1P1-201ENST00000422309 375 ntBASIC3.12□□□□□ -1.91
IFT43Q96FT9 AC245047.3-201ENST00000429428 127 ntBASIC3.12□□□□□ -1.91
IFT43Q96FT9 AC107083.1-201ENST00000439643 279 ntBASIC3.12□□□□□ -1.91
IFT43Q96FT9 AC026271.5-201ENST00000577873 130 ntBASIC3.12□□□□□ -1.91
IFT43Q96FT9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.12□□□□□ -1.91
IFT43Q96FT9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.12□□□□□ -1.91
IFT43Q96FT9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
IFT43Q96FT9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
IFT43Q96FT9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
IFT43Q96FT9 RNY1P6-201ENST00000384193 109 ntBASIC3.11□□□□□ -1.91
IFT43Q96FT9 SNORA11.4-201ENST00000408823 129 ntBASIC3.11□□□□□ -1.91
IFT43Q96FT9 RNA5SP274-201ENST00000410484 108 ntBASIC3.11□□□□□ -1.91
IFT43Q96FT9 RN7SKP220-201ENST00000410611 288 ntBASIC3.11□□□□□ -1.91
IFT43Q96FT9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms