Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RNU6-269P-201ENST00000391077 97 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 SNORA3B-201ENST00000391305 131 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 MIR892B-201ENST00000401279 77 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.22□□□□□ -2.44
TTC28Q96AY4 EPS15P1-201ENST00000448836 336 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 AC112204.1-201ENST00000502591 103 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RPL39P5-202ENST00000512505 151 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RNU6-848P-201ENST00000515948 107 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RNU6-617P-201ENST00000516147 107 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RNU6-473P-201ENST00000516164 107 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.22□□□□□ -2.44
TTC28Q96AY4 HIF1AP1-201ENST00000553642 175 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.22□□□□□ -2.44
TTC28Q96AY4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.22□□□□□ -2.44
TTC28Q96AY4 AC087683.1-201ENST00000591187 441 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 AL359999.1-201ENST00000604513 294 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 RNU6-85P-201ENST00000605989 107 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 uc_338.19-201ENST00000616808 99 ntBASIC-0.22□□□□□ -2.44
TTC28Q96AY4 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.22□□□□□ -2.44
TTC28Q96AY4 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 RNY1P12-201ENST00000364251 105 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 MIR363-201ENST00000384840 75 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 MIR106A-201ENST00000384870 81 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 MIR454-201ENST00000390180 115 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 SCARNA18B-201ENST00000458806 135 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 RNU6-479P-201ENST00000516348 105 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 RNU6-341P-201ENST00000516973 96 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 AC018448.1-201ENST00000552843 316 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 MIR548AD-201ENST00000584780 82 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 Y_RNA.830-201ENST00000628531 96 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 SNORA27.1-201ENST00000362604 124 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 RNU6-413P-201ENST00000384115 107 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 MT-TY-201ENST00000387409 66 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.23□□□□□ -2.45
TTC28Q96AY4 GPR143P-201ENST00000434155 205 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 AL031667.1-201ENST00000440222 725 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 SNORA27.4-201ENST00000516650 95 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 AP003733.2-201ENST00000529409 171 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 AL355375.2-201ENST00000574825 175 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 AC006386.1-201ENST00000619436 415 ntBASIC-0.23□□□□□ -2.45
TTC28Q96AY4 RNU6-694P-201ENST00000364071 147 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MIR570-201ENST00000384917 97 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 RNU6-903P-201ENST00000391270 109 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MRPS10P2-201ENST00000431226 381 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MTCO1P5-201ENST00000433573 344 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MIR2115-201ENST00000516657 100 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 RNU6-612P-201ENST00000516909 102 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MTND2P32-201ENST00000521584 1038 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 AC068587.5-201ENST00000528506 175 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MIR466-201ENST00000580653 84 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 AL049777.1-201ENST00000622740 518 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MIR499B-201ENST00000636498 73 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
TTC28Q96AY4 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 RNU6-934P-201ENST00000365154 107 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 SNORD14.1-201ENST00000365609 90 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 SNORA8.2-201ENST00000384372 139 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MIR516B2-201ENST00000385190 85 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MTCO2P33-201ENST00000402100 465 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MTCO3P19-201ENST00000415864 321 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 AC018865.2-201ENST00000423631 129 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MTCO2P29-201ENST00000465212 189 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.24□□□□□ -2.45
TTC28Q96AY4 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 RNU7-43P-201ENST00000516554 64 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MTND1P5-201ENST00000517906 940 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MTND2P38-201ENST00000522536 667 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 AC104576.1-201ENST00000524225 88 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MTATP6P15-201ENST00000527233 835 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 MIR6740-201ENST00000618268 113 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 AL078596.1-201ENST00000624856 447 ntBASIC-0.24□□□□□ -2.45
TTC28Q96AY4 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.25□□□□□ -2.45
TTC28Q96AY4 U8.6-201ENST00000364939 135 ntBASIC-0.25□□□□□ -2.45
TTC28Q96AY4 RNU6-541P-201ENST00000384709 110 ntBASIC-0.25□□□□□ -2.45
TTC28Q96AY4 RNU6-535P-201ENST00000384722 107 ntBASIC-0.25□□□□□ -2.45
TTC28Q96AY4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
TTC28Q96AY4 MTCYBP36-201ENST00000404146 440 ntBASIC-0.25□□□□□ -2.45
TTC28Q96AY4 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.25□□□□□ -2.45
TTC28Q96AY4 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.25□□□□□ -2.45
TTC28Q96AY4 snoU13.6-201ENST00000458785 104 ntBASIC-0.25□□□□□ -2.45
TTC28Q96AY4 SNORA18.7-201ENST00000516910 131 ntBASIC-0.25□□□□□ -2.45
TTC28Q96AY4 RNU7-156P-201ENST00000517214 74 ntBASIC-0.25□□□□□ -2.45
TTC28Q96AY4 AC060788.1-201ENST00000521318 469 ntBASIC-0.25□□□□□ -2.45
TTC28Q96AY4 RBM11P1-201ENST00000604951 799 ntBASIC-0.25□□□□□ -2.45
TTC28Q96AY4 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 211.7 ms