Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC020891.4-201ENST00000605745 93 ntBASIC0.04□□□□□ -2.4
LRRC28Q86X40 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.04□□□□□ -2.4
LRRC28Q86X40 SNORA42.1-201ENST00000363515 137 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 SNORD118-201ENST00000363593 134 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 RNU6-716P-201ENST00000365621 103 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
LRRC28Q86X40 RNU6-1042P-201ENST00000384204 107 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 Y_RNA.537-201ENST00000384626 109 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 RNU2-54P-201ENST00000410299 190 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 SNORD12B-201ENST00000410433 91 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 SNORA40.8-201ENST00000411034 126 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 MLLT10P1-201ENST00000418346 262 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.03□□□□□ -2.4
LRRC28Q86X40 AC015818.7-201ENST00000428754 109 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 MTND3P21-201ENST00000433774 331 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 AC087499.7-201ENST00000441958 109 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 MTND5P5-201ENST00000503764 376 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.03□□□□□ -2.4
LRRC28Q86X40 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.03□□□□□ -2.4
LRRC28Q86X40 RNA5SP94-201ENST00000516917 108 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 RNU1-54P-201ENST00000517181 120 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 MTND3P12-201ENST00000559068 328 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 AC005972.2-201ENST00000604690 348 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 RAC1P9-201ENST00000604990 392 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 MIR6128-201ENST00000615528 109 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 AC078883.4-201ENST00000623218 367 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 MTND1P7-201ENST00000632801 297 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 MIR3662-201ENST00000637030 95 ntBASIC0.03□□□□□ -2.4
LRRC28Q86X40 Y_RNA.115-201ENST00000363272 98 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 RNA5SP62-201ENST00000363457 110 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 RNU6-1090P-201ENST00000364065 94 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 RNU6-934P-201ENST00000365154 107 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 Y_RNA.473-201ENST00000384333 102 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 RNU6-700P-201ENST00000391043 107 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 U8.19-201ENST00000459095 133 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 RNU7-87P-201ENST00000459343 62 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 HMGN1P10-201ENST00000474557 553 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 RPS29P25-201ENST00000481709 171 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 AC091959.1-201ENST00000495857 238 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 AC093534.1-201ENST00000504977 132 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 RNU6-977P-201ENST00000516411 103 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 AC069113.3-201ENST00000521019 150 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 EIF1P4-201ENST00000572664 335 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 MIR4676-201ENST00000583078 72 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 uc_338.6-201ENST00000613544 171 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 MIR4315-1-201ENST00000636800 73 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 MIR4315-2-201ENST00000640925 73 ntBASIC0.02□□□□□ -2.41
LRRC28Q86X40 SNORD116-9-201ENST00000384000 95 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 RNU6-815P-201ENST00000384080 113 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 SNORD116-3-201ENST00000384287 95 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 SNORD116-7-201ENST00000384404 95 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 SNORD116-5-201ENST00000384462 95 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 U8.17-201ENST00000391292 132 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
LRRC28Q86X40 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
LRRC28Q86X40 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 RNU2-16P-201ENST00000410712 136 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 AC090844.1-201ENST00000422019 156 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.01□□□□□ -2.41
LRRC28Q86X40 RNU6-408P-201ENST00000515910 100 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 RNU6-436P-201ENST00000516171 114 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 RNU6-273P-201ENST00000516937 96 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.01□□□□□ -2.41
LRRC28Q86X40 MIR4771-2-201ENST00000577758 74 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 MIR4771-1-201ENST00000582617 74 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 MIR4264-201ENST00000583520 66 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 AC063944.3-201ENST00000609969 533 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 Pinc.1-201ENST00000616452 154 ntBASIC0.01□□□□□ -2.41
LRRC28Q86X40 RNU6-268P-201ENST00000364174 107 ntBASIC0□□□□□ -2.41
LRRC28Q86X40 RNU6-205P-201ENST00000390858 107 ntBASIC0□□□□□ -2.41
LRRC28Q86X40 Y_RNA.594-201ENST00000410373 140 ntBASIC0□□□□□ -2.41
LRRC28Q86X40 RNU6-373P-201ENST00000411247 98 ntBASIC0□□□□□ -2.41
LRRC28Q86X40 MTND2P22-201ENST00000444325 1033 ntBASIC0□□□□□ -2.41
LRRC28Q86X40 MTND1P1-201ENST00000445453 368 ntBASIC0□□□□□ -2.41
LRRC28Q86X40 CHEK2P4-201ENST00000450340 246 ntBASIC0□□□□□ -2.41
LRRC28Q86X40 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0□□□□□ -2.41
LRRC28Q86X40 AC090897.1-201ENST00000580909 226 ntBASIC0□□□□□ -2.41
LRRC28Q86X40 SNORA25.18-201ENST00000607153 114 ntBASIC0□□□□□ -2.41
LRRC28Q86X40 MIR4791-201ENST00000607666 84 ntBASIC0□□□□□ -2.41
LRRC28Q86X40 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0□□□□□ -2.41
LRRC28Q86X40 AL109933.3-201ENST00000619095 188 ntBASIC0□□□□□ -2.41
LRRC28Q86X40 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.01□□□□□ -2.41
LRRC28Q86X40 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.01□□□□□ -2.41
LRRC28Q86X40 SNORA24-201ENST00000384096 131 ntBASIC-0.01□□□□□ -2.41
LRRC28Q86X40 SNORA8.2-201ENST00000384372 139 ntBASIC-0.01□□□□□ -2.41
LRRC28Q86X40 SNORD38C-201ENST00000384381 69 ntBASIC-0.01□□□□□ -2.41
LRRC28Q86X40 SNORA51.10-201ENST00000384418 136 ntBASIC-0.01□□□□□ -2.41
LRRC28Q86X40 RNU6-601P-201ENST00000384540 107 ntBASIC-0.01□□□□□ -2.41
LRRC28Q86X40 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.01□□□□□ -2.41
LRRC28Q86X40 RNA5SP127-201ENST00000411051 133 ntBASIC-0.01□□□□□ -2.41
LRRC28Q86X40 AC074085.1-201ENST00000413598 418 ntBASIC-0.01□□□□□ -2.41
LRRC28Q86X40 AL353997.1-201ENST00000432936 108 ntBASIC-0.01□□□□□ -2.41
LRRC28Q86X40 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.01□□□□□ -2.41
LRRC28Q86X40 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.01□□□□□ -2.41
LRRC28Q86X40 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.01□□□□□ -2.41
LRRC28Q86X40 SNORA25.12-201ENST00000516202 82 ntBASIC-0.01□□□□□ -2.41
LRRC28Q86X40 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.01□□□□□ -2.41
LRRC28Q86X40 MIR2355-201ENST00000517199 87 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms