Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AL356280.1-201ENST00000603614 379 ntBASIC2.69□□□□□ -1.98
YBX1P67809 AL359075.3-201ENST00000613288 217 ntBASIC2.69□□□□□ -1.98
YBX1P67809 AL137067.1-201ENST00000615933 120 ntBASIC2.69□□□□□ -1.98
YBX1P67809 MIR6079-201ENST00000635807 62 ntBASIC2.69□□□□□ -1.98
YBX1P67809 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
YBX1P67809 AC018630.2-201ENST00000534866 2403 ntBASIC2.69□□□□□ -1.98
YBX1P67809 AC096644.4-201ENST00000563417 2912 ntBASIC2.69□□□□□ -1.98
YBX1P67809 Y_RNA.281-201ENST00000364774 94 ntBASIC2.68□□□□□ -1.98
YBX1P67809 Y_RNA.366-201ENST00000365540 102 ntBASIC2.68□□□□□ -1.98
YBX1P67809 MIR95-201ENST00000385072 81 ntBASIC2.68□□□□□ -1.98
YBX1P67809 SNORD12C-201ENST00000386307 89 ntBASIC2.68□□□□□ -1.98
YBX1P67809 MIR802-201ENST00000390235 94 ntBASIC2.68□□□□□ -1.98
YBX1P67809 SNORD77.3-201ENST00000391113 65 ntBASIC2.68□□□□□ -1.98
YBX1P67809 RNU6-554P-201ENST00000410466 106 ntBASIC2.68□□□□□ -1.98
YBX1P67809 RNU2-63P-201ENST00000410792 194 ntBASIC2.68□□□□□ -1.98
YBX1P67809 RNA5SP508-201ENST00000411327 119 ntBASIC2.68□□□□□ -1.98
YBX1P67809 EDDM3CP-201ENST00000415977 425 ntBASIC2.68□□□□□ -1.98
YBX1P67809 AC092427.1-202ENST00000430569 476 ntBASIC2.68□□□□□ -1.98
YBX1P67809 RN7SL499P-201ENST00000481141 276 ntBASIC2.68□□□□□ -1.98
YBX1P67809 RNA5SP367-201ENST00000516557 118 ntBASIC2.68□□□□□ -1.98
YBX1P67809 RNU6-113P-201ENST00000516653 101 ntBASIC2.68□□□□□ -1.98
YBX1P67809 Y_RNA.714-201ENST00000517065 90 ntBASIC2.68□□□□□ -1.98
YBX1P67809 AL355297.2-201ENST00000604792 129 ntBASIC2.68□□□□□ -1.98
YBX1P67809 AC245060.5-201ENST00000610778 3293 ntBASIC2.67□□□□□ -1.98
YBX1P67809 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.67□□□□□ -1.98
YBX1P67809 RNU6-461P-201ENST00000364195 107 ntBASIC2.67□□□□□ -1.98
YBX1P67809 SNORD56.5-201ENST00000364281 72 ntBASIC2.67□□□□□ -1.98
YBX1P67809 Y_RNA.242-201ENST00000364473 110 ntBASIC2.67□□□□□ -1.98
YBX1P67809 MIR570-201ENST00000384917 97 ntBASIC2.67□□□□□ -1.98
YBX1P67809 RNA5SP184-201ENST00000411071 108 ntBASIC2.67□□□□□ -1.98
YBX1P67809 AC087499.2-201ENST00000432861 149 ntBASIC2.67□□□□□ -1.98
YBX1P67809 AL445687.1-201ENST00000439946 251 ntBASIC2.67□□□□□ -1.98
YBX1P67809 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.67□□□□□ -1.98
YBX1P67809 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.67□□□□□ -1.98
YBX1P67809 RNU1-142P-201ENST00000516682 145 ntBASIC2.67□□□□□ -1.98
YBX1P67809 RNU6-341P-201ENST00000516973 96 ntBASIC2.67□□□□□ -1.98
YBX1P67809 SNORA48.11-201ENST00000517015 89 ntBASIC2.67□□□□□ -1.98
YBX1P67809 RNU7-128P-201ENST00000517247 62 ntBASIC2.67□□□□□ -1.98
YBX1P67809 SNORA31.26-201ENST00000517250 137 ntBASIC2.67□□□□□ -1.98
YBX1P67809 MIR7843-201ENST00000622274 79 ntBASIC2.67□□□□□ -1.98
YBX1P67809 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.67□□□□□ -1.98
YBX1P67809 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
YBX1P67809 Y_RNA.369-201ENST00000365568 117 ntBASIC2.66□□□□□ -1.98
YBX1P67809 RNU2-48P-201ENST00000410694 191 ntBASIC2.66□□□□□ -1.98
YBX1P67809 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.66□□□□□ -1.98
YBX1P67809 TRBV12-1-201ENST00000479785 344 ntBASIC2.66□□□□□ -1.98
YBX1P67809 AC107016.2-201ENST00000547968 190 ntBASIC2.66□□□□□ -1.98
YBX1P67809 AC087685.1-201ENST00000587507 141 ntBASIC2.66□□□□□ -1.98
YBX1P67809 ZNF861P-201ENST00000588126 639 ntBASIC2.66□□□□□ -1.98
YBX1P67809 AL591926.4-201ENST00000616895 298 ntBASIC2.66□□□□□ -1.98
YBX1P67809 ZNF271P-202ENST00000465539 1970 ntBASIC2.66□□□□□ -1.98
YBX1P67809 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
YBX1P67809 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
YBX1P67809 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
YBX1P67809 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
YBX1P67809 Y_RNA.85-201ENST00000363014 111 ntBASIC2.65□□□□□ -1.99
YBX1P67809 Y_RNA.549-201ENST00000384657 102 ntBASIC2.65□□□□□ -1.99
YBX1P67809 MIR548A2-201ENST00000384956 97 ntBASIC2.65□□□□□ -1.99
YBX1P67809 MIR504-201ENST00000385065 83 ntBASIC2.65□□□□□ -1.99
YBX1P67809 RNA5SP323-201ENST00000391094 133 ntBASIC2.65□□□□□ -1.99
YBX1P67809 AL138827.1-201ENST00000402666 306 ntBASIC2.65□□□□□ -1.99
YBX1P67809 AC105272.1-201ENST00000438604 198 ntBASIC2.65□□□□□ -1.99
YBX1P67809 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.65□□□□□ -1.99
YBX1P67809 AC108938.1-201ENST00000451204 136 ntBASIC2.65□□□□□ -1.99
YBX1P67809 AL049830.1-201ENST00000468034 425 ntBASIC2.65□□□□□ -1.99
YBX1P67809 SCARNA15-202ENST00000516881 127 ntBASIC2.65□□□□□ -1.99
YBX1P67809 RNU6-667P-201ENST00000517186 102 ntBASIC2.65□□□□□ -1.99
YBX1P67809 AC091544.4-201ENST00000555268 342 ntBASIC2.65□□□□□ -1.99
YBX1P67809 MIR4524B-201ENST00000581569 115 ntBASIC2.65□□□□□ -1.99
YBX1P67809 MIR4769-201ENST00000584126 77 ntBASIC2.65□□□□□ -1.99
YBX1P67809 MIR338-201ENST00000636369 67 ntBASIC2.65□□□□□ -1.99
YBX1P67809 ICE2P2-201ENST00000483823 2787 ntBASIC2.65□□□□□ -1.99
YBX1P67809 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
YBX1P67809 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
YBX1P67809 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.64□□□□□ -1.99
YBX1P67809 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
YBX1P67809 MIR518F-201ENST00000384973 87 ntBASIC2.64□□□□□ -1.99
YBX1P67809 MIR561-201ENST00000385216 97 ntBASIC2.64□□□□□ -1.99
YBX1P67809 UBBP3-201ENST00000445497 241 ntBASIC2.64□□□□□ -1.99
YBX1P67809 COX6CP6-201ENST00000490840 228 ntBASIC2.64□□□□□ -1.99
YBX1P67809 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.64□□□□□ -1.99
YBX1P67809 RNU6-56P-201ENST00000516986 93 ntBASIC2.64□□□□□ -1.99
YBX1P67809 AL358944.1-201ENST00000528537 144 ntBASIC2.64□□□□□ -1.99
YBX1P67809 AC009831.4-201ENST00000620744 325 ntBASIC2.64□□□□□ -1.99
YBX1P67809 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
YBX1P67809 AP006437.1-201ENST00000641440 3685 ntBASIC2.63□□□□□ -1.99
YBX1P67809 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
YBX1P67809 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
YBX1P67809 SNORA1B-201ENST00000362535 133 ntBASIC2.63□□□□□ -1.99
YBX1P67809 Y_RNA.163-201ENST00000363702 113 ntBASIC2.63□□□□□ -1.99
YBX1P67809 RNU6-756P-201ENST00000383997 107 ntBASIC2.63□□□□□ -1.99
YBX1P67809 SNORA8-201ENST00000384574 139 ntBASIC2.63□□□□□ -1.99
YBX1P67809 MIR522-201ENST00000385071 87 ntBASIC2.63□□□□□ -1.99
YBX1P67809 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
YBX1P67809 MIR1302-5-201ENST00000408164 150 ntBASIC2.63□□□□□ -1.99
YBX1P67809 FTH1P12-201ENST00000432137 551 ntBASIC2.63□□□□□ -1.99
YBX1P67809 HMGN2P32-201ENST00000444648 269 ntBASIC2.63□□□□□ -1.99
YBX1P67809 RNU6-240P-201ENST00000516098 97 ntBASIC2.63□□□□□ -1.99
YBX1P67809 AC024614.2-201ENST00000577584 372 ntBASIC2.63□□□□□ -1.99
YBX1P67809 MIR5197-201ENST00000583721 112 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms