Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL929325.1-201ENST00000603096 117 ntBASIC1.85□□□□□ -2.11
MMP3P08254 AL512598.1-201ENST00000610158 273 ntBASIC1.85□□□□□ -2.11
MMP3P08254 AC013791.1-201ENST00000616619 62 ntBASIC1.85□□□□□ -2.11
MMP3P08254 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
MMP3P08254 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.85□□□□□ -2.11
MMP3P08254 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
MMP3P08254 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MMP3P08254 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MMP3P08254 RNU6-112P-201ENST00000363599 104 ntBASIC1.84□□□□□ -2.11
MMP3P08254 Y_RNA.293-201ENST00000364908 93 ntBASIC1.84□□□□□ -2.11
MMP3P08254 AL512604.1-201ENST00000404812 257 ntBASIC1.84□□□□□ -2.11
MMP3P08254 MIR1278-201ENST00000408753 81 ntBASIC1.84□□□□□ -2.11
MMP3P08254 RNA5SP489-201ENST00000410986 109 ntBASIC1.84□□□□□ -2.11
MMP3P08254 AC010154.1-201ENST00000425857 269 ntBASIC1.84□□□□□ -2.11
MMP3P08254 AC245047.3-201ENST00000429428 127 ntBASIC1.84□□□□□ -2.11
MMP3P08254 SNORD2.1-201ENST00000458762 69 ntBASIC1.84□□□□□ -2.11
MMP3P08254 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.84□□□□□ -2.11
MMP3P08254 RNY3P16-201ENST00000516338 101 ntBASIC1.84□□□□□ -2.11
MMP3P08254 AC011604.1-201ENST00000545978 196 ntBASIC1.84□□□□□ -2.11
MMP3P08254 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.84□□□□□ -2.11
MMP3P08254 MIR3935-201ENST00000583472 104 ntBASIC1.84□□□□□ -2.11
MMP3P08254 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.84□□□□□ -2.11
MMP3P08254 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.84□□□□□ -2.11
MMP3P08254 SNORA1B-201ENST00000362535 133 ntBASIC1.83□□□□□ -2.12
MMP3P08254 Y_RNA.82-201ENST00000363000 102 ntBASIC1.83□□□□□ -2.12
MMP3P08254 Y_RNA.92-201ENST00000363043 102 ntBASIC1.83□□□□□ -2.12
MMP3P08254 Y_RNA.235-201ENST00000364412 102 ntBASIC1.83□□□□□ -2.12
MMP3P08254 Y_RNA.292-201ENST00000364904 97 ntBASIC1.83□□□□□ -2.12
MMP3P08254 Y_RNA.306-201ENST00000365015 102 ntBASIC1.83□□□□□ -2.12
MMP3P08254 Y_RNA.312-201ENST00000365089 102 ntBASIC1.83□□□□□ -2.12
MMP3P08254 Y_RNA.322-201ENST00000365151 102 ntBASIC1.83□□□□□ -2.12
MMP3P08254 RNU6-296P-201ENST00000384608 107 ntBASIC1.83□□□□□ -2.12
MMP3P08254 Y_RNA.572-201ENST00000384757 98 ntBASIC1.83□□□□□ -2.12
MMP3P08254 SUMO2P12-201ENST00000405924 140 ntBASIC1.83□□□□□ -2.12
MMP3P08254 SNORA36B-201ENST00000410438 131 ntBASIC1.83□□□□□ -2.12
MMP3P08254 RNU2-7P-201ENST00000410794 178 ntBASIC1.83□□□□□ -2.12
MMP3P08254 RNU6-383P-201ENST00000410864 94 ntBASIC1.83□□□□□ -2.12
MMP3P08254 RNA5SP100-201ENST00000410903 110 ntBASIC1.83□□□□□ -2.12
MMP3P08254 RNA5SP59-201ENST00000410922 110 ntBASIC1.83□□□□□ -2.12
MMP3P08254 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.83□□□□□ -2.12
MMP3P08254 Y_RNA.650-201ENST00000459002 102 ntBASIC1.83□□□□□ -2.12
MMP3P08254 RNU7-95P-201ENST00000459222 64 ntBASIC1.83□□□□□ -2.12
MMP3P08254 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.83□□□□□ -2.12
MMP3P08254 SNORA31.17-201ENST00000516953 127 ntBASIC1.83□□□□□ -2.12
MMP3P08254 Y_RNA.777-201ENST00000516982 102 ntBASIC1.83□□□□□ -2.12
MMP3P08254 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.83□□□□□ -2.12
MMP3P08254 AC127455.1-201ENST00000565496 145 ntBASIC1.83□□□□□ -2.12
MMP3P08254 MIR5692C2-201ENST00000577959 77 ntBASIC1.83□□□□□ -2.12
MMP3P08254 MIR3671-201ENST00000580455 88 ntBASIC1.83□□□□□ -2.12
MMP3P08254 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.83□□□□□ -2.12
MMP3P08254 MIR4282-201ENST00000583613 67 ntBASIC1.83□□□□□ -2.12
MMP3P08254 Y_RNA.771-201ENST00000598668 102 ntBASIC1.83□□□□□ -2.12
MMP3P08254 AL645939.4-201ENST00000604495 135 ntBASIC1.83□□□□□ -2.12
MMP3P08254 AP003357.1-201ENST00000604497 148 ntBASIC1.83□□□□□ -2.12
MMP3P08254 AC011921.3-201ENST00000605540 361 ntBASIC1.83□□□□□ -2.12
MMP3P08254 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.83□□□□□ -2.12
MMP3P08254 AL442067.1-201ENST00000613261 223 ntBASIC1.83□□□□□ -2.12
MMP3P08254 AL078604.3-201ENST00000615580 211 ntBASIC1.83□□□□□ -2.12
MMP3P08254 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.83□□□□□ -2.12
MMP3P08254 Y_RNA.789-201ENST00000622480 102 ntBASIC1.83□□□□□ -2.12
MMP3P08254 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
MMP3P08254 RNU6-1205P-201ENST00000363625 106 ntBASIC1.82□□□□□ -2.12
MMP3P08254 RNU6-899P-201ENST00000363947 107 ntBASIC1.82□□□□□ -2.12
MMP3P08254 RNU6-1323P-201ENST00000384025 107 ntBASIC1.82□□□□□ -2.12
MMP3P08254 RPL36AP21-201ENST00000490372 323 ntBASIC1.82□□□□□ -2.12
MMP3P08254 BX248123.2-201ENST00000606318 124 ntBASIC1.82□□□□□ -2.12
MMP3P08254 U1.36-201ENST00000620684 176 ntBASIC1.82□□□□□ -2.12
MMP3P08254 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.82□□□□□ -2.12
MMP3P08254 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.82□□□□□ -2.12
MMP3P08254 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
MMP3P08254 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MMP3P08254 SNORA63D-201ENST00000364359 132 ntBASIC1.81□□□□□ -2.12
MMP3P08254 RNU6-1318P-201ENST00000365389 103 ntBASIC1.81□□□□□ -2.12
MMP3P08254 SNORA72-201ENST00000384339 132 ntBASIC1.81□□□□□ -2.12
MMP3P08254 MIR520A-201ENST00000384862 85 ntBASIC1.81□□□□□ -2.12
MMP3P08254 SNORA31.10-201ENST00000516482 106 ntBASIC1.81□□□□□ -2.12
MMP3P08254 AC130289.1-201ENST00000577321 73 ntBASIC1.81□□□□□ -2.12
MMP3P08254 AC073349.3-201ENST00000617616 186 ntBASIC1.81□□□□□ -2.12
MMP3P08254 AL365265.1-201ENST00000621045 234 ntBASIC1.81□□□□□ -2.12
MMP3P08254 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
MMP3P08254 AC100821.1-201ENST00000523153 2479 ntBASIC1.8□□□□□ -2.12
MMP3P08254 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.8□□□□□ -2.12
MMP3P08254 RNU6-923P-201ENST00000364753 107 ntBASIC1.8□□□□□ -2.12
MMP3P08254 SNORD48-201ENST00000364953 64 ntBASIC1.8□□□□□ -2.12
MMP3P08254 Y_RNA.355-201ENST00000365462 98 ntBASIC1.8□□□□□ -2.12
MMP3P08254 MIR520G-201ENST00000385064 90 ntBASIC1.8□□□□□ -2.12
MMP3P08254 Y_RNA.626-201ENST00000411288 95 ntBASIC1.8□□□□□ -2.12
MMP3P08254 AL158823.1-201ENST00000418441 478 ntBASIC1.8□□□□□ -2.12
MMP3P08254 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
MMP3P08254 STAG3L5P-204ENST00000443759 179 ntBASIC1.8□□□□□ -2.12
MMP3P08254 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.8□□□□□ -2.12
MMP3P08254 RNU4-71P-201ENST00000516258 113 ntBASIC1.8□□□□□ -2.12
MMP3P08254 RNU2-56P-201ENST00000516826 190 ntBASIC1.8□□□□□ -2.12
MMP3P08254 RNA5SP364-201ENST00000516938 78 ntBASIC1.8□□□□□ -2.12
MMP3P08254 RNU6-341P-201ENST00000516973 96 ntBASIC1.8□□□□□ -2.12
MMP3P08254 SNORD53B-201ENST00000577887 78 ntBASIC1.8□□□□□ -2.12
MMP3P08254 MIR8054-201ENST00000620877 86 ntBASIC1.8□□□□□ -2.12
MMP3P08254 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
MMP3P08254 RNU1-42P-201ENST00000364033 160 ntBASIC1.79□□□□□ -2.12
MMP3P08254 Y_RNA.274-201ENST00000364714 101 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms