Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.63□□□□□ -2.15
CSPG5O95196 RNU6-1278P-201ENST00000516130 107 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 RNU6-191P-201ENST00000516295 94 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 RNU2-31P-201ENST00000516954 155 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.63□□□□□ -2.15
CSPG5O95196 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 MIR4452-201ENST00000583004 71 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 AC022217.4-201ENST00000604389 163 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 AC004832.4-201ENST00000608952 331 ntBASIC1.63□□□□□ -2.15
CSPG5O95196 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
CSPG5O95196 Y_RNA.136-201ENST00000363444 102 ntBASIC1.62□□□□□ -2.15
CSPG5O95196 Y_RNA.341-201ENST00000365341 102 ntBASIC1.62□□□□□ -2.15
CSPG5O95196 RNU6-53P-201ENST00000365367 106 ntBASIC1.62□□□□□ -2.15
CSPG5O95196 RNU6-203P-201ENST00000384038 104 ntBASIC1.62□□□□□ -2.15
CSPG5O95196 SNORA53-201ENST00000391141 249 ntBASIC1.62□□□□□ -2.15
CSPG5O95196 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.62□□□□□ -2.15
CSPG5O95196 AL161935.2-201ENST00000414627 60 ntBASIC1.62□□□□□ -2.15
CSPG5O95196 AC024067.1-201ENST00000426199 223 ntBASIC1.62□□□□□ -2.15
CSPG5O95196 RPS27P1-201ENST00000450552 247 ntBASIC1.62□□□□□ -2.15
CSPG5O95196 RNU1-98P-201ENST00000458992 160 ntBASIC1.62□□□□□ -2.15
CSPG5O95196 RNU7-94P-201ENST00000459576 63 ntBASIC1.62□□□□□ -2.15
CSPG5O95196 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.62□□□□□ -2.15
CSPG5O95196 SNORA31.24-201ENST00000517232 57 ntBASIC1.62□□□□□ -2.15
CSPG5O95196 SNORA77B-201ENST00000578179 125 ntBASIC1.62□□□□□ -2.15
CSPG5O95196 AC018630.2-201ENST00000534866 2403 ntBASIC1.61□□□□□ -2.15
CSPG5O95196 SNORA25.1-201ENST00000362326 128 ntBASIC1.61□□□□□ -2.15
CSPG5O95196 SNORD114-27-201ENST00000363766 70 ntBASIC1.61□□□□□ -2.15
CSPG5O95196 RNU6-326P-201ENST00000365480 107 ntBASIC1.61□□□□□ -2.15
CSPG5O95196 RNU6-710P-201ENST00000410424 105 ntBASIC1.61□□□□□ -2.15
CSPG5O95196 RN7SKP51-201ENST00000410781 304 ntBASIC1.61□□□□□ -2.15
CSPG5O95196 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.61□□□□□ -2.15
CSPG5O95196 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.61□□□□□ -2.15
CSPG5O95196 RPS20P10-201ENST00000451209 253 ntBASIC1.61□□□□□ -2.15
CSPG5O95196 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.61□□□□□ -2.15
CSPG5O95196 MIR6079-201ENST00000635807 62 ntBASIC1.61□□□□□ -2.15
CSPG5O95196 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CSPG5O95196 SNORD33-201ENST00000362761 85 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 RNU6-1048P-201ENST00000364054 107 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 Y_RNA.267-201ENST00000364679 109 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 Y_RNA.310-201ENST00000365063 113 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 SNORD114-22-201ENST00000365423 72 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 Y_RNA.368-201ENST00000365547 113 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 RNU6-514P-201ENST00000384208 107 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 RNU6-196P-201ENST00000384315 107 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 RNU6-1065P-201ENST00000384513 106 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 MIR7-2-201ENST00000384970 110 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 MIR513A1-201ENST00000385138 129 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 MIR1302-3-201ENST00000408128 138 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 MIR1304-201ENST00000408243 91 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 AL162725.1-201ENST00000435405 301 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 AC091959.1-201ENST00000495857 238 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 SERF1AP1-201ENST00000514575 187 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 RNU6-1291P-201ENST00000516591 104 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.6□□□□□ -2.15
CSPG5O95196 MIR4503-201ENST00000582187 83 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 AC037487.3-201ENST00000606668 112 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 AL353770.2-201ENST00000620024 78 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 AC068647.2-201ENST00000637380 353 ntBASIC1.6□□□□□ -2.15
CSPG5O95196 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CSPG5O95196 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
CSPG5O95196 Y_RNA.144-201ENST00000363521 113 ntBASIC1.59□□□□□ -2.15
CSPG5O95196 RNU6-662P-201ENST00000384253 104 ntBASIC1.59□□□□□ -2.15
CSPG5O95196 RNU1-78P-201ENST00000391248 165 ntBASIC1.59□□□□□ -2.15
CSPG5O95196 RNU2-38P-201ENST00000410856 79 ntBASIC1.59□□□□□ -2.15
CSPG5O95196 RNU2-14P-201ENST00000411053 191 ntBASIC1.59□□□□□ -2.15
CSPG5O95196 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.59□□□□□ -2.15
CSPG5O95196 RPS4XP11-201ENST00000446897 772 ntBASIC1.59□□□□□ -2.15
CSPG5O95196 RNU1-123P-201ENST00000458950 160 ntBASIC1.59□□□□□ -2.15
CSPG5O95196 RNU6-1096P-201ENST00000517089 102 ntBASIC1.59□□□□□ -2.15
CSPG5O95196 AC091178.2-201ENST00000584401 117 ntBASIC1.59□□□□□ -2.15
CSPG5O95196 AL512605.2-201ENST00000592972 256 ntBASIC1.59□□□□□ -2.15
CSPG5O95196 AL121890.5-201ENST00000620848 304 ntBASIC1.59□□□□□ -2.15
CSPG5O95196 MIR8054-201ENST00000620877 86 ntBASIC1.59□□□□□ -2.15
CSPG5O95196 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.59□□□□□ -2.15
CSPG5O95196 U6.104-201ENST00000637979 90 ntBASIC1.59□□□□□ -2.15
CSPG5O95196 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.58□□□□□ -2.16
CSPG5O95196 RNU6-801P-201ENST00000364087 105 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 SNORD1A-201ENST00000364968 72 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 Y_RNA.456-201ENST00000384232 111 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 RNU6-440P-201ENST00000390882 105 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 AL034345.1-201ENST00000407768 123 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 AC233266.1-201ENST00000454518 96 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 RPS29P23-201ENST00000458635 123 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 SNORA31.10-201ENST00000516482 106 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 MIR6078-201ENST00000611069 100 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 AC242852.1-201ENST00000612151 96 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 RMST_2.1-201ENST00000617263 136 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 AC244015.1-201ENST00000622301 99 ntBASIC1.58□□□□□ -2.16
CSPG5O95196 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CSPG5O95196 AC134026.1-201ENST00000623249 2239 ntBASIC1.57□□□□□ -2.16
CSPG5O95196 Y_RNA.288-201ENST00000364854 92 ntBASIC1.57□□□□□ -2.16
CSPG5O95196 RNU6-42P-201ENST00000384165 107 ntBASIC1.57□□□□□ -2.16
CSPG5O95196 RNU6-463P-201ENST00000384340 107 ntBASIC1.57□□□□□ -2.16
CSPG5O95196 RNU6-1031P-201ENST00000384773 107 ntBASIC1.57□□□□□ -2.16
CSPG5O95196 RNU6-1248P-201ENST00000391096 64 ntBASIC1.57□□□□□ -2.16
CSPG5O95196 SNORA26.5-201ENST00000391215 123 ntBASIC1.57□□□□□ -2.16
CSPG5O95196 STAG3L5P-204ENST00000443759 179 ntBASIC1.57□□□□□ -2.16
CSPG5O95196 AC023790.1-201ENST00000482174 347 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 225.7 ms