Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 MIR4790-201ENST00000577799 79 ntBASIC0.25□□□□□ -2.37
CCNB1IP1Q9NPC3 AC004467.1-201ENST00000615678 330 ntBASIC0.25□□□□□ -2.37
CCNB1IP1Q9NPC3 Y_RNA.269-201ENST00000364685 89 ntBASIC0.24□□□□□ -2.37
CCNB1IP1Q9NPC3 SNORD28B-201ENST00000390993 75 ntBASIC0.24□□□□□ -2.37
CCNB1IP1Q9NPC3 RNU6-131P-201ENST00000391144 107 ntBASIC0.24□□□□□ -2.37
CCNB1IP1Q9NPC3 RNU2-61P-201ENST00000411069 191 ntBASIC0.24□□□□□ -2.37
CCNB1IP1Q9NPC3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.24□□□□□ -2.37
CCNB1IP1Q9NPC3 MTND2P22-201ENST00000444325 1033 ntBASIC0.24□□□□□ -2.37
CCNB1IP1Q9NPC3 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
CCNB1IP1Q9NPC3 RNA5SP436-201ENST00000516020 115 ntBASIC0.24□□□□□ -2.37
CCNB1IP1Q9NPC3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.24□□□□□ -2.37
CCNB1IP1Q9NPC3 MIR548AR-201ENST00000582191 57 ntBASIC0.24□□□□□ -2.37
CCNB1IP1Q9NPC3 AC018638.8-201ENST00000588755 281 ntBASIC0.24□□□□□ -2.37
CCNB1IP1Q9NPC3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.24□□□□□ -2.37
CCNB1IP1Q9NPC3 Y_RNA.157-201ENST00000363638 102 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 RNU4-45P-201ENST00000365469 141 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 Y_RNA.368-201ENST00000365547 113 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 Y_RNA.402-201ENST00000383972 102 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 RNA5SP193-201ENST00000410353 107 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 RNA5SP118-201ENST00000410385 109 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 snoU13.18-201ENST00000459483 104 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 RNU6-314P-201ENST00000516574 104 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 RNU6-1016P-201ENST00000516689 94 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 AC055872.1-201ENST00000570978 278 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 AC015726.2-201ENST00000620112 122 ntBASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.23□□□□□ -2.37
CCNB1IP1Q9NPC3 RNU6-593P-201ENST00000364716 112 ntBASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 RNU6-580P-201ENST00000365159 107 ntBASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 Y_RNA.473-201ENST00000384333 102 ntBASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 Y_RNA.594-201ENST00000410373 140 ntBASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 SNRPGP10-201ENST00000432323 225 ntBASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 AL353997.1-201ENST00000432936 108 ntBASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 MTCO3P10-201ENST00000455912 772 ntBASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 AC011352.1-201ENST00000512300 793 ntBASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 RNU6-408P-201ENST00000515910 100 ntBASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 MIR2355-201ENST00000517199 87 ntBASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 AC006380.1-201ENST00000603598 186 ntBASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.22□□□□□ -2.37
CCNB1IP1Q9NPC3 MIR377-201ENST00000362145 69 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 MIR18A-201ENST00000362310 71 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.2-201ENST00000362330 96 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 RNY4P14-201ENST00000363656 96 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 RNU6-961P-201ENST00000363893 105 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 RNU6-396P-201ENST00000365369 105 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 SNORA72-201ENST00000384339 132 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 MIR598-201ENST00000384868 97 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 MIR181A1-201ENST00000385026 110 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.670-201ENST00000516255 105 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 AC005972.2-201ENST00000604690 348 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 AC240442.1-201ENST00000616055 283 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 AC022079.1-201ENST00000621546 602 ntBASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.41-201ENST00000362646 102 ntBASIC0.2□□□□□ -2.38
CCNB1IP1Q9NPC3 SNORD114-23-201ENST00000363536 72 ntBASIC0.2□□□□□ -2.38
CCNB1IP1Q9NPC3 MT-TN-201ENST00000387400 73 ntBASIC0.2□□□□□ -2.38
CCNB1IP1Q9NPC3 RNU2-54P-201ENST00000410299 190 ntBASIC0.2□□□□□ -2.38
CCNB1IP1Q9NPC3 RNU6-1050P-201ENST00000410388 107 ntBASIC0.2□□□□□ -2.38
CCNB1IP1Q9NPC3 MTATP6P17-201ENST00000431030 672 ntBASIC0.2□□□□□ -2.38
CCNB1IP1Q9NPC3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.2□□□□□ -2.38
CCNB1IP1Q9NPC3 AC098826.2-201ENST00000452011 651 ntBASIC0.2□□□□□ -2.38
CCNB1IP1Q9NPC3 RNU6-1012P-201ENST00000516606 109 ntBASIC0.2□□□□□ -2.38
CCNB1IP1Q9NPC3 AC012433.1-201ENST00000588916 398 ntBASIC0.2□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.101-201ENST00000363154 102 ntBASIC0.19□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.376-201ENST00000365638 108 ntBASIC0.19□□□□□ -2.38
CCNB1IP1Q9NPC3 MIR520H-201ENST00000385126 88 ntBASIC0.19□□□□□ -2.38
CCNB1IP1Q9NPC3 CHEK2P4-201ENST00000450340 246 ntBASIC0.19□□□□□ -2.38
CCNB1IP1Q9NPC3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.19□□□□□ -2.38
CCNB1IP1Q9NPC3 RNU6-830P-201ENST00000516353 107 ntBASIC0.19□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.682-201ENST00000516457 100 ntBASIC0.19□□□□□ -2.38
CCNB1IP1Q9NPC3 AC060780.3-201ENST00000589464 80 ntBASIC0.19□□□□□ -2.38
CCNB1IP1Q9NPC3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.19□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.89-201ENST00000363031 102 ntBASIC0.18□□□□□ -2.38
CCNB1IP1Q9NPC3 RNY1-201ENST00000364228 113 ntBASIC0.18□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.559-201ENST00000384686 107 ntBASIC0.18□□□□□ -2.38
CCNB1IP1Q9NPC3 MTCO2P27-201ENST00000420740 428 ntBASIC0.18□□□□□ -2.38
CCNB1IP1Q9NPC3 RPS29P25-201ENST00000481709 171 ntBASIC0.18□□□□□ -2.38
CCNB1IP1Q9NPC3 RNU4-49P-201ENST00000516080 140 ntBASIC0.18□□□□□ -2.38
CCNB1IP1Q9NPC3 MIR3612-201ENST00000579753 87 ntBASIC0.18□□□□□ -2.38
CCNB1IP1Q9NPC3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.18□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.9-201ENST00000362354 101 ntBASIC0.17□□□□□ -2.38
CCNB1IP1Q9NPC3 RNU6-349P-201ENST00000362402 107 ntBASIC0.17□□□□□ -2.38
CCNB1IP1Q9NPC3 SNORD45.3-201ENST00000363836 72 ntBASIC0.17□□□□□ -2.38
CCNB1IP1Q9NPC3 SNORD14E-201ENST00000364009 85 ntBASIC0.17□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.355-201ENST00000365462 98 ntBASIC0.17□□□□□ -2.38
CCNB1IP1Q9NPC3 SNORD38C-201ENST00000384381 69 ntBASIC0.17□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.508-201ENST00000384502 114 ntBASIC0.17□□□□□ -2.38
CCNB1IP1Q9NPC3 MIR520F-201ENST00000384824 87 ntBASIC0.17□□□□□ -2.38
CCNB1IP1Q9NPC3 RNU6-1199P-201ENST00000411249 104 ntBASIC0.17□□□□□ -2.38
CCNB1IP1Q9NPC3 Y_RNA.708-201ENST00000516950 96 ntBASIC0.17□□□□□ -2.38
CCNB1IP1Q9NPC3 RBM11P1-201ENST00000604951 799 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms