Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 USP9YP30-201ENST00000430729 455 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 MTND1P26-201ENST00000440488 538 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 SNORA40.9-201ENST00000515895 93 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 RNU6-864P-201ENST00000516256 108 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 AP003327.1-201ENST00000529684 127 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 AC245008.1-201ENST00000608123 476 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 AL109933.3-201ENST00000619095 188 ntBASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.14□□□□□ -2.39
CLHC1Q8NHS4 RNU6-318P-201ENST00000384283 103 ntBASIC0.13□□□□□ -2.39
CLHC1Q8NHS4 MT-TN-201ENST00000387400 73 ntBASIC0.13□□□□□ -2.39
CLHC1Q8NHS4 RNA5SP63-201ENST00000391225 112 ntBASIC0.13□□□□□ -2.39
CLHC1Q8NHS4 AL390729.2-201ENST00000416137 156 ntBASIC0.13□□□□□ -2.39
CLHC1Q8NHS4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.13□□□□□ -2.39
CLHC1Q8NHS4 MTND1P17-201ENST00000448961 204 ntBASIC0.13□□□□□ -2.39
CLHC1Q8NHS4 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
CLHC1Q8NHS4 RN7SKP299-201ENST00000606679 301 ntBASIC0.13□□□□□ -2.39
CLHC1Q8NHS4 Z99129.1-201ENST00000612510 255 ntBASIC0.13□□□□□ -2.39
CLHC1Q8NHS4 MIR3974-201ENST00000637126 96 ntBASIC0.13□□□□□ -2.39
CLHC1Q8NHS4 MIR1321-201ENST00000637766 79 ntBASIC0.13□□□□□ -2.39
CLHC1Q8NHS4 RNU6-874P-201ENST00000362390 105 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 RNU6-1084P-201ENST00000362498 107 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 SNORD44.1-201ENST00000363202 61 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 SNORD50B-201ENST00000364995 70 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 RNU6-396P-201ENST00000365369 105 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 Y_RNA.358-201ENST00000365491 99 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 Y_RNA.376-201ENST00000365638 108 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 Y_RNA.476-201ENST00000384347 108 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 RNU6-329P-201ENST00000459618 107 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 Y_RNA.704-201ENST00000516851 102 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 MIR548AR-201ENST00000582191 57 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 MIR3611-201ENST00000584484 83 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 RBM11P1-201ENST00000604951 799 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 AL162730.1-201ENST00000605734 292 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 AC005014.2-201ENST00000607795 599 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 AC078883.4-201ENST00000623218 367 ntBASIC0.12□□□□□ -2.39
CLHC1Q8NHS4 Y_RNA.38-201ENST00000362617 102 ntBASIC0.11□□□□□ -2.39
CLHC1Q8NHS4 RNU6-879P-201ENST00000364328 108 ntBASIC0.11□□□□□ -2.39
CLHC1Q8NHS4 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
CLHC1Q8NHS4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.11□□□□□ -2.39
CLHC1Q8NHS4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.11□□□□□ -2.39
CLHC1Q8NHS4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.11□□□□□ -2.39
CLHC1Q8NHS4 RNU1-54P-201ENST00000517181 120 ntBASIC0.11□□□□□ -2.39
CLHC1Q8NHS4 Y_RNA.48-201ENST00000362710 103 ntBASIC0.1□□□□□ -2.39
CLHC1Q8NHS4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
CLHC1Q8NHS4 MIR520H-201ENST00000385126 88 ntBASIC0.1□□□□□ -2.39
CLHC1Q8NHS4 SNORD28B-201ENST00000390993 75 ntBASIC0.1□□□□□ -2.39
CLHC1Q8NHS4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.1□□□□□ -2.39
CLHC1Q8NHS4 NDUFA4P2-201ENST00000489989 244 ntBASIC0.1□□□□□ -2.39
CLHC1Q8NHS4 RNU6-830P-201ENST00000516353 107 ntBASIC0.1□□□□□ -2.39
CLHC1Q8NHS4 MIR3612-201ENST00000579753 87 ntBASIC0.1□□□□□ -2.39
CLHC1Q8NHS4 AC092634.7-201ENST00000621022 103 ntBASIC0.1□□□□□ -2.39
CLHC1Q8NHS4 Y_RNA.368-201ENST00000365547 113 ntBASIC0.09□□□□□ -2.4
CLHC1Q8NHS4 RNU6-700P-201ENST00000391043 107 ntBASIC0.09□□□□□ -2.4
CLHC1Q8NHS4 RNU6-131P-201ENST00000391144 107 ntBASIC0.09□□□□□ -2.4
CLHC1Q8NHS4 RNU6-1088P-201ENST00000516850 104 ntBASIC0.09□□□□□ -2.4
CLHC1Q8NHS4 AC012433.1-201ENST00000588916 398 ntBASIC0.09□□□□□ -2.4
CLHC1Q8NHS4 MIR518A1-201ENST00000385068 85 ntBASIC0.08□□□□□ -2.4
CLHC1Q8NHS4 RNU2-61P-201ENST00000411069 191 ntBASIC0.08□□□□□ -2.4
CLHC1Q8NHS4 MLLT10P1-201ENST00000418346 262 ntBASIC0.08□□□□□ -2.4
CLHC1Q8NHS4 SNRPGP12-201ENST00000449481 213 ntBASIC0.08□□□□□ -2.4
CLHC1Q8NHS4 RNU6-566P-201ENST00000516790 107 ntBASIC0.08□□□□□ -2.4
CLHC1Q8NHS4 Y_RNA.714-201ENST00000517065 90 ntBASIC0.08□□□□□ -2.4
CLHC1Q8NHS4 AC078938.1-201ENST00000620993 318 ntBASIC0.08□□□□□ -2.4
CLHC1Q8NHS4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.08□□□□□ -2.4
CLHC1Q8NHS4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.08□□□□□ -2.4
CLHC1Q8NHS4 Y_RNA.148-201ENST00000363557 117 ntBASIC0.07□□□□□ -2.4
CLHC1Q8NHS4 SNORD45.3-201ENST00000363836 72 ntBASIC0.07□□□□□ -2.4
CLHC1Q8NHS4 SNORA72-201ENST00000384339 132 ntBASIC0.07□□□□□ -2.4
CLHC1Q8NHS4 MIR520F-201ENST00000384824 87 ntBASIC0.07□□□□□ -2.4
CLHC1Q8NHS4 AL031003.1-201ENST00000404229 172 ntBASIC0.07□□□□□ -2.4
CLHC1Q8NHS4 RNU6-373P-201ENST00000411247 98 ntBASIC0.07□□□□□ -2.4
CLHC1Q8NHS4 RNU7-87P-201ENST00000459343 62 ntBASIC0.07□□□□□ -2.4
CLHC1Q8NHS4 AC022523.2-201ENST00000561045 150 ntBASIC0.07□□□□□ -2.4
CLHC1Q8NHS4 AC004467.1-201ENST00000615678 330 ntBASIC0.07□□□□□ -2.4
CLHC1Q8NHS4 AC090617.10-201ENST00000624308 134 ntBASIC0.07□□□□□ -2.4
CLHC1Q8NHS4 AC024614.3-201ENST00000637860 256 ntBASIC0.07□□□□□ -2.4
CLHC1Q8NHS4 RNU6-1301P-201ENST00000362724 104 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 RNA5SP257-201ENST00000363023 116 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 RNA5SP62-201ENST00000363457 110 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 RNU6-1013P-201ENST00000384180 107 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 Y_RNA.537-201ENST00000384626 109 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 SNORA40.8-201ENST00000411034 126 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 SNORD83.1-201ENST00000411362 77 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 SNRPGP10-201ENST00000432323 225 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 AC011352.1-201ENST00000512300 793 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 RNU6-977P-201ENST00000516411 103 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 RNU6-1314P-201ENST00000517139 104 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 MIR4804-201ENST00000581683 73 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 AC087685.1-201ENST00000587507 141 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 AC005972.2-201ENST00000604690 348 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 AC018462.2-201ENST00000605375 395 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 MIR6128-201ENST00000615528 109 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 MIR3662-201ENST00000637030 95 ntBASIC0.06□□□□□ -2.4
CLHC1Q8NHS4 Y_RNA.172-201ENST00000363765 102 ntBASIC0.05□□□□□ -2.4
CLHC1Q8NHS4 RNU6-934P-201ENST00000365154 107 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 254.5 ms