Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
KRTCAP3Q53RY4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 SNORA25.1-201ENST00000362326 128 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 RNU4-13P-201ENST00000364019 141 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 RNA5SP160-201ENST00000364866 120 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.307-201ENST00000365022 117 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-514P-201ENST00000384208 107 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-950P-201ENST00000384651 107 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 HSPE1P24-201ENST00000450782 238 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 RPS20P10-201ENST00000451209 253 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 AC005908.1-201ENST00000468701 347 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 AC091959.1-201ENST00000495857 238 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-341P-201ENST00000516973 96 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 AC015720.1-201ENST00000565251 277 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 AC091178.2-201ENST00000584401 117 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 AC004832.4-201ENST00000608952 331 ntBASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTCAP3Q53RY4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-801P-201ENST00000364087 105 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.310-201ENST00000365063 113 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.447-201ENST00000384184 113 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-662P-201ENST00000384253 104 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.477-201ENST00000384352 108 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-360P-201ENST00000390944 104 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 AL603910.2-201ENST00000407268 136 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 COX6CP10-201ENST00000416832 224 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 snoU13.27-201ENST00000459278 104 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 RPL39P38-201ENST00000467018 153 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 SNORA27.4-201ENST00000516650 95 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 RNU6-1096P-201ENST00000517089 102 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 MIR4643-201ENST00000577473 78 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 MIR3128-201ENST00000581957 66 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 MIR3935-201ENST00000583472 104 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 AC005972.2-201ENST00000604690 348 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 AC084768.2-201ENST00000622736 221 ntBASIC1.66□□□□□ -2.14
KRTCAP3Q53RY4 WWP1P1-201ENST00000466609 2769 ntBASIC1.65□□□□□ -2.14
KRTCAP3Q53RY4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.65□□□□□ -2.14
KRTCAP3Q53RY4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 Y_RNA.267-201ENST00000364679 109 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 RNA5SP190-201ENST00000365222 118 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 SNORA4.2-201ENST00000365313 147 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 Y_RNA.350-201ENST00000365409 98 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 Y_RNA.401-201ENST00000383965 117 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 SNORA67.5-201ENST00000391036 107 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 RNU1-78P-201ENST00000391248 165 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 JTBP1-201ENST00000441314 247 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 Y_RNA.673-201ENST00000516306 88 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 RNU6-250P-201ENST00000516958 103 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 AL512605.2-201ENST00000592972 256 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 AP001485.1-201ENST00000604799 199 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 MIR8054-201ENST00000620877 86 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 AC068647.2-201ENST00000637380 353 ntBASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTCAP3Q53RY4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 UBE2WP1-201ENST00000362030 340 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 Y_RNA.44-201ENST00000362676 108 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 Y_RNA.117-201ENST00000363294 101 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 Y_RNA.217-201ENST00000364214 105 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 RNU6-740P-201ENST00000364734 105 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 RNU6-440P-201ENST00000390882 105 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 RN7SKP200-201ENST00000410564 320 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 RNU6-651P-201ENST00000411040 105 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 RNU2-14P-201ENST00000411053 191 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 RPS4XP11-201ENST00000446897 772 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 RNU1-98P-201ENST00000458992 160 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 Y_RNA.641-201ENST00000459414 105 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 AC108729.3-201ENST00000513484 108 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 RNU2-56P-201ENST00000516826 190 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 AC136628.3-201ENST00000521868 290 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 MIR4709-201ENST00000577272 72 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 MIR4498-201ENST00000577599 66 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 MIR4255-201ENST00000579351 72 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 AC006006.1-201ENST00000603082 144 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 SNRPGP19-201ENST00000603826 189 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 MIR502-201ENST00000606349 86 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 U2.14-201ENST00000615943 113 ntBASIC1.64□□□□□ -2.15
KRTCAP3Q53RY4 RNU6-1048P-201ENST00000364054 107 ntBASIC1.63□□□□□ -2.15
KRTCAP3Q53RY4 Y_RNA.277-201ENST00000364754 102 ntBASIC1.63□□□□□ -2.15
KRTCAP3Q53RY4 Y_RNA.352-201ENST00000365439 102 ntBASIC1.63□□□□□ -2.15
KRTCAP3Q53RY4 Y_RNA.539-201ENST00000384635 107 ntBASIC1.63□□□□□ -2.15
KRTCAP3Q53RY4 MIR9-3-201ENST00000385084 90 ntBASIC1.63□□□□□ -2.15
KRTCAP3Q53RY4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
KRTCAP3Q53RY4 SNORA26.5-201ENST00000391215 123 ntBASIC1.63□□□□□ -2.15
KRTCAP3Q53RY4 AC108667.1-201ENST00000428618 249 ntBASIC1.63□□□□□ -2.15
KRTCAP3Q53RY4 AC233266.1-201ENST00000454518 96 ntBASIC1.63□□□□□ -2.15
KRTCAP3Q53RY4 RNU7-34P-201ENST00000459394 64 ntBASIC1.63□□□□□ -2.15
KRTCAP3Q53RY4 Y_RNA.637-201ENST00000459424 114 ntBASIC1.63□□□□□ -2.15
KRTCAP3Q53RY4 SNORA31.10-201ENST00000516482 106 ntBASIC1.63□□□□□ -2.15
KRTCAP3Q53RY4 RNU6-1291P-201ENST00000516591 104 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms