Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPRAP18433 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PTPRAP18433 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPRAP18433 SNORD24-201ENST00000383884 75 ntBASIC3.19□□□□□ -1.9
PTPRAP18433 RNA5SP467-201ENST00000391274 118 ntBASIC3.19□□□□□ -1.9
PTPRAP18433 CALM2P4-201ENST00000430810 426 ntBASIC3.19□□□□□ -1.9
PTPRAP18433 RPS27P29-201ENST00000463110 252 ntBASIC3.19□□□□□ -1.9
PTPRAP18433 AC023141.11-201ENST00000508864 202 ntBASIC3.19□□□□□ -1.9
PTPRAP18433 RNU1-41P-201ENST00000516161 162 ntBASIC3.19□□□□□ -1.9
PTPRAP18433 RNU1-48P-201ENST00000516400 162 ntBASIC3.19□□□□□ -1.9
PTPRAP18433 SNORA48.11-201ENST00000517015 89 ntBASIC3.19□□□□□ -1.9
PTPRAP18433 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.19□□□□□ -1.9
PTPRAP18433 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PTPRAP18433 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.19□□□□□ -1.9
PTPRAP18433 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.19□□□□□ -1.9
PTPRAP18433 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPRAP18433 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTPRAP18433 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PTPRAP18433 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PTPRAP18433 SNORA68.1-201ENST00000364537 132 ntBASIC3.18□□□□□ -1.9
PTPRAP18433 Y_RNA.267-201ENST00000364679 109 ntBASIC3.18□□□□□ -1.9
PTPRAP18433 RNU6-106P-201ENST00000384405 107 ntBASIC3.18□□□□□ -1.9
PTPRAP18433 MIR548A2-201ENST00000384956 97 ntBASIC3.18□□□□□ -1.9
PTPRAP18433 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PTPRAP18433 UQCRHP3-201ENST00000451503 251 ntBASIC3.18□□□□□ -1.9
PTPRAP18433 RPS29P24-201ENST00000486345 171 ntBASIC3.18□□□□□ -1.9
PTPRAP18433 RNU6-693P-201ENST00000516134 107 ntBASIC3.18□□□□□ -1.9
PTPRAP18433 RN7SKP43-201ENST00000516173 320 ntBASIC3.18□□□□□ -1.9
PTPRAP18433 RNU6-1041P-201ENST00000516254 102 ntBASIC3.18□□□□□ -1.9
PTPRAP18433 ZNF861P-201ENST00000588126 639 ntBASIC3.18□□□□□ -1.9
PTPRAP18433 AL590808.1-201ENST00000618696 141 ntBASIC3.18□□□□□ -1.9
PTPRAP18433 MIR6079-201ENST00000635807 62 ntBASIC3.18□□□□□ -1.9
PTPRAP18433 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRAP18433 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRAP18433 MIR126-201ENST00000362291 85 ntBASIC3.17□□□□□ -1.9
PTPRAP18433 Y_RNA.281-201ENST00000364774 94 ntBASIC3.17□□□□□ -1.9
PTPRAP18433 RNA5SP125-201ENST00000364843 120 ntBASIC3.17□□□□□ -1.9
PTPRAP18433 SNORD77.3-201ENST00000391113 65 ntBASIC3.17□□□□□ -1.9
PTPRAP18433 RNU6-554P-201ENST00000410466 106 ntBASIC3.17□□□□□ -1.9
PTPRAP18433 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPRAP18433 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.17□□□□□ -1.9
PTPRAP18433 AC068657.1-201ENST00000520807 306 ntBASIC3.17□□□□□ -1.9
PTPRAP18433 AL356280.1-201ENST00000603614 379 ntBASIC3.17□□□□□ -1.9
PTPRAP18433 AC022217.4-201ENST00000604389 163 ntBASIC3.17□□□□□ -1.9
PTPRAP18433 AL359075.3-201ENST00000613288 217 ntBASIC3.17□□□□□ -1.9
PTPRAP18433 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTPRAP18433 Y_RNA.366-201ENST00000365540 102 ntBASIC3.16□□□□□ -1.9
PTPRAP18433 AC007064.1-201ENST00000412238 351 ntBASIC3.16□□□□□ -1.9
PTPRAP18433 SNRPGP13-201ENST00000442212 177 ntBASIC3.16□□□□□ -1.9
PTPRAP18433 AC008413.1-201ENST00000511864 177 ntBASIC3.16□□□□□ -1.9
PTPRAP18433 Y_RNA.677-201ENST00000516401 85 ntBASIC3.16□□□□□ -1.9
PTPRAP18433 RNU6-412P-201ENST00000516434 106 ntBASIC3.16□□□□□ -1.9
PTPRAP18433 SCARNA15-202ENST00000516881 127 ntBASIC3.16□□□□□ -1.9
PTPRAP18433 RNU6-537P-201ENST00000517277 103 ntBASIC3.16□□□□□ -1.9
PTPRAP18433 AC007012.1-201ENST00000567192 175 ntBASIC3.16□□□□□ -1.9
PTPRAP18433 AL591926.4-201ENST00000616895 298 ntBASIC3.16□□□□□ -1.9
PTPRAP18433 AC018630.2-201ENST00000534866 2403 ntBASIC3.16□□□□□ -1.9
PTPRAP18433 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.9
PTPRAP18433 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PTPRAP18433 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTPRAP18433 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
PTPRAP18433 RNU6-1107P-201ENST00000364817 104 ntBASIC3.15□□□□□ -1.91
PTPRAP18433 MIR592-201ENST00000384959 97 ntBASIC3.15□□□□□ -1.91
PTPRAP18433 MIR887-201ENST00000401258 79 ntBASIC3.15□□□□□ -1.91
PTPRAP18433 EDDM3CP-201ENST00000415977 425 ntBASIC3.15□□□□□ -1.91
PTPRAP18433 AC003982.1-202ENST00000469928 248 ntBASIC3.15□□□□□ -1.91
PTPRAP18433 RNU6-113P-201ENST00000516653 101 ntBASIC3.15□□□□□ -1.91
PTPRAP18433 RNU6-341P-201ENST00000516973 96 ntBASIC3.15□□□□□ -1.91
PTPRAP18433 RNU6-667P-201ENST00000517186 102 ntBASIC3.15□□□□□ -1.91
PTPRAP18433 AL355297.2-201ENST00000604792 129 ntBASIC3.15□□□□□ -1.91
PTPRAP18433 AL137067.1-201ENST00000615933 120 ntBASIC3.15□□□□□ -1.91
PTPRAP18433 MIR338-201ENST00000636369 67 ntBASIC3.15□□□□□ -1.91
PTPRAP18433 MIR376A2-201ENST00000636782 80 ntBASIC3.15□□□□□ -1.91
PTPRAP18433 U6.108-201ENST00000637764 58 ntBASIC3.15□□□□□ -1.91
PTPRAP18433 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.15□□□□□ -1.91
PTPRAP18433 MIR26A1-201ENST00000362205 77 ntBASIC3.14□□□□□ -1.91
PTPRAP18433 SNORA33-201ENST00000363664 130 ntBASIC3.14□□□□□ -1.91
PTPRAP18433 MIR570-201ENST00000384917 97 ntBASIC3.14□□□□□ -1.91
PTPRAP18433 MIR518F-201ENST00000384973 87 ntBASIC3.14□□□□□ -1.91
PTPRAP18433 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PTPRAP18433 RNU11-5P-201ENST00000391216 129 ntBASIC3.14□□□□□ -1.91
PTPRAP18433 RNU2-63P-201ENST00000410792 194 ntBASIC3.14□□□□□ -1.91
PTPRAP18433 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.14□□□□□ -1.91
PTPRAP18433 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.14□□□□□ -1.91
PTPRAP18433 SNORA50A-202ENST00000629536 136 ntBASIC3.14□□□□□ -1.91
PTPRAP18433 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PTPRAP18433 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTPRAP18433 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.13□□□□□ -1.91
PTPRAP18433 ZNF271P-202ENST00000465539 1970 ntBASIC3.13□□□□□ -1.91
PTPRAP18433 MIR148B-201ENST00000362252 99 ntBASIC3.13□□□□□ -1.91
PTPRAP18433 RNA5SP432-201ENST00000362480 116 ntBASIC3.13□□□□□ -1.91
PTPRAP18433 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTPRAP18433 SNORD21-201ENST00000383953 95 ntBASIC3.13□□□□□ -1.91
PTPRAP18433 SNORA70B-201ENST00000384210 135 ntBASIC3.13□□□□□ -1.91
PTPRAP18433 Y_RNA.549-201ENST00000384657 102 ntBASIC3.13□□□□□ -1.91
PTPRAP18433 SNORD12C-201ENST00000386307 89 ntBASIC3.13□□□□□ -1.91
PTPRAP18433 RNY4P30-201ENST00000410216 95 ntBASIC3.13□□□□□ -1.91
PTPRAP18433 RNA5SP136-201ENST00000410906 107 ntBASIC3.13□□□□□ -1.91
PTPRAP18433 AL353689.1-201ENST00000438895 199 ntBASIC3.13□□□□□ -1.91
PTPRAP18433 AC018868.1-201ENST00000491307 315 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 183.1 ms