Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.52□□□□□ -2.01
KLF4O43474 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
KLF4O43474 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
KLF4O43474 SNORD14E-201ENST00000364009 85 ntBASIC2.51□□□□□ -2.01
KLF4O43474 RNU6-360P-201ENST00000390944 104 ntBASIC2.51□□□□□ -2.01
KLF4O43474 PCNPP3-201ENST00000393579 471 ntBASIC2.51□□□□□ -2.01
KLF4O43474 RNU4-43P-201ENST00000410628 137 ntBASIC2.51□□□□□ -2.01
KLF4O43474 RNU6-1135P-201ENST00000411083 103 ntBASIC2.51□□□□□ -2.01
KLF4O43474 SEPT7P4-201ENST00000437076 306 ntBASIC2.51□□□□□ -2.01
KLF4O43474 RNA5SP153-201ENST00000516498 76 ntBASIC2.51□□□□□ -2.01
KLF4O43474 RNA5SP437-201ENST00000517249 129 ntBASIC2.51□□□□□ -2.01
KLF4O43474 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.51□□□□□ -2.01
KLF4O43474 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.51□□□□□ -2.01
KLF4O43474 MIR3162-201ENST00000581818 82 ntBASIC2.51□□□□□ -2.01
KLF4O43474 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.51□□□□□ -2.01
KLF4O43474 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.51□□□□□ -2.01
KLF4O43474 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
KLF4O43474 RNA5SP276-201ENST00000362580 94 ntBASIC2.5□□□□□ -2.01
KLF4O43474 SNORD45.3-201ENST00000363836 72 ntBASIC2.5□□□□□ -2.01
KLF4O43474 RNU6-643P-201ENST00000384018 107 ntBASIC2.5□□□□□ -2.01
KLF4O43474 SNORA6-201ENST00000384033 151 ntBASIC2.5□□□□□ -2.01
KLF4O43474 RNU6-1031P-201ENST00000384773 107 ntBASIC2.5□□□□□ -2.01
KLF4O43474 AC087499.2-201ENST00000432861 149 ntBASIC2.5□□□□□ -2.01
KLF4O43474 HMGN2P32-201ENST00000444648 269 ntBASIC2.5□□□□□ -2.01
KLF4O43474 RPL39P40-201ENST00000445481 146 ntBASIC2.5□□□□□ -2.01
KLF4O43474 SNRPGP8-201ENST00000454064 226 ntBASIC2.5□□□□□ -2.01
KLF4O43474 AC074198.2-201ENST00000508153 258 ntBASIC2.5□□□□□ -2.01
KLF4O43474 SNORA31.10-201ENST00000516482 106 ntBASIC2.5□□□□□ -2.01
KLF4O43474 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.5□□□□□ -2.01
KLF4O43474 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.5□□□□□ -2.01
KLF4O43474 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
KLF4O43474 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
KLF4O43474 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KLF4O43474 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KLF4O43474 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
KLF4O43474 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KLF4O43474 Y_RNA.337-201ENST00000365312 102 ntBASIC2.49□□□□□ -2.01
KLF4O43474 RNU6-163P-201ENST00000384396 106 ntBASIC2.49□□□□□ -2.01
KLF4O43474 RNU6-239P-201ENST00000390990 99 ntBASIC2.49□□□□□ -2.01
KLF4O43474 RNA5SP184-201ENST00000411071 108 ntBASIC2.49□□□□□ -2.01
KLF4O43474 RPL23AP6-201ENST00000446637 472 ntBASIC2.49□□□□□ -2.01
KLF4O43474 AC108938.1-201ENST00000451204 136 ntBASIC2.49□□□□□ -2.01
KLF4O43474 AL160236.1-201ENST00000556317 195 ntBASIC2.49□□□□□ -2.01
KLF4O43474 MIR4319-201ENST00000577285 85 ntBASIC2.49□□□□□ -2.01
KLF4O43474 Z82195.2-201ENST00000612348 18351 ntBASIC2.48□□□□□ -2.01
KLF4O43474 AC062016.1-201ENST00000355719 319 ntBASIC2.48□□□□□ -2.01
KLF4O43474 RNU4-84P-201ENST00000364200 139 ntBASIC2.48□□□□□ -2.01
KLF4O43474 Y_RNA.272-201ENST00000364696 102 ntBASIC2.48□□□□□ -2.01
KLF4O43474 SNORA4.2-201ENST00000365313 147 ntBASIC2.48□□□□□ -2.01
KLF4O43474 RNU6-442P-201ENST00000383968 104 ntBASIC2.48□□□□□ -2.01
KLF4O43474 AC006461.1-201ENST00000412637 326 ntBASIC2.48□□□□□ -2.01
KLF4O43474 NDUFA4P2-201ENST00000489989 244 ntBASIC2.48□□□□□ -2.01
KLF4O43474 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.48□□□□□ -2.01
KLF4O43474 CYCTP-201ENST00000504253 315 ntBASIC2.48□□□□□ -2.01
KLF4O43474 RNU6-197P-201ENST00000516680 100 ntBASIC2.48□□□□□ -2.01
KLF4O43474 SNORA31.17-201ENST00000516953 127 ntBASIC2.48□□□□□ -2.01
KLF4O43474 RNU6-365P-201ENST00000517113 106 ntBASIC2.48□□□□□ -2.01
KLF4O43474 AC079600.2-201ENST00000550076 130 ntBASIC2.48□□□□□ -2.01
KLF4O43474 AC008507.4-201ENST00000585464 127 ntBASIC2.48□□□□□ -2.01
KLF4O43474 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.48□□□□□ -2.01
KLF4O43474 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
KLF4O43474 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
KLF4O43474 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
KLF4O43474 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
KLF4O43474 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
KLF4O43474 MIR449A-201ENST00000362113 91 ntBASIC2.47□□□□□ -2.01
KLF4O43474 Y_RNA.336-201ENST00000365307 109 ntBASIC2.47□□□□□ -2.01
KLF4O43474 Y_RNA.521-201ENST00000384560 114 ntBASIC2.47□□□□□ -2.01
KLF4O43474 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.47□□□□□ -2.01
KLF4O43474 SNORD45.4-201ENST00000516629 73 ntBASIC2.47□□□□□ -2.01
KLF4O43474 AC120024.3-201ENST00000603167 156 ntBASIC2.47□□□□□ -2.01
KLF4O43474 AL773524.1-201ENST00000614065 229 ntBASIC2.47□□□□□ -2.01
KLF4O43474 AC027279.3-201ENST00000625055 122 ntBASIC2.47□□□□□ -2.01
KLF4O43474 MTND1P7-201ENST00000632801 297 ntBASIC2.47□□□□□ -2.01
KLF4O43474 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.47□□□□□ -2.01
KLF4O43474 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
KLF4O43474 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.46□□□□□ -2.02
KLF4O43474 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.46□□□□□ -2.02
KLF4O43474 MRPS17P9-201ENST00000511924 393 ntBASIC2.46□□□□□ -2.02
KLF4O43474 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.46□□□□□ -2.02
KLF4O43474 RNU6-561P-201ENST00000516222 102 ntBASIC2.46□□□□□ -2.02
KLF4O43474 RNU6-1212P-201ENST00000517023 104 ntBASIC2.46□□□□□ -2.02
KLF4O43474 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.46□□□□□ -2.02
KLF4O43474 AC104465.1-201ENST00000611365 139 ntBASIC2.46□□□□□ -2.02
KLF4O43474 AC009487.2-201ENST00000420969 6821 ntBASIC2.46□□□□□ -2.02
KLF4O43474 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
KLF4O43474 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
KLF4O43474 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
KLF4O43474 SNORA80E-201ENST00000384744 137 ntBASIC2.45□□□□□ -2.02
KLF4O43474 RNU6-394P-201ENST00000410735 107 ntBASIC2.45□□□□□ -2.02
KLF4O43474 AC244636.1-201ENST00000421152 228 ntBASIC2.45□□□□□ -2.02
KLF4O43474 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.45□□□□□ -2.02
KLF4O43474 RNU6-504P-201ENST00000516568 104 ntBASIC2.45□□□□□ -2.02
KLF4O43474 SCARNA16.3-201ENST00000516595 184 ntBASIC2.45□□□□□ -2.02
KLF4O43474 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.45□□□□□ -2.02
KLF4O43474 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.45□□□□□ -2.02
KLF4O43474 MIR378D2-201ENST00000580636 98 ntBASIC2.45□□□□□ -2.02
KLF4O43474 AL049779.4-201ENST00000604500 156 ntBASIC2.45□□□□□ -2.02
KLF4O43474 AL513423.1-201ENST00000621695 132 ntBASIC2.45□□□□□ -2.02
KLF4O43474 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms