Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 SNORA75.2-201ENST00000391138 150 ntBASIC0.96□□□□□ -2.26
VMP1Q96GC9 SNORA75.3-201ENST00000391231 150 ntBASIC0.96□□□□□ -2.26
VMP1Q96GC9 MIR1276-201ENST00000408707 83 ntBASIC0.96□□□□□ -2.26
VMP1Q96GC9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.96□□□□□ -2.26
VMP1Q96GC9 AL162725.1-201ENST00000435405 301 ntBASIC0.96□□□□□ -2.26
VMP1Q96GC9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.96□□□□□ -2.26
VMP1Q96GC9 AC114811.1-201ENST00000507207 168 ntBASIC0.96□□□□□ -2.26
VMP1Q96GC9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.96□□□□□ -2.26
VMP1Q96GC9 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
VMP1Q96GC9 Y_RNA.361-201ENST00000365515 120 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 MIR608-201ENST00000384820 100 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 RNU6-1304P-201ENST00000411374 106 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 RPS3AP1-201ENST00000413190 320 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 AC098614.3-201ENST00000438957 440 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.95□□□□□ -2.26
VMP1Q96GC9 RPEP5-201ENST00000441137 268 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.95□□□□□ -2.26
VMP1Q96GC9 RNU6-197P-201ENST00000516680 100 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 SNORA20.3-201ENST00000516880 132 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 RNU7-4P-201ENST00000516961 62 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 AC023442.1-201ENST00000531247 422 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 AC006380.1-201ENST00000603598 186 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 AC113139.1-201ENST00000605049 239 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 AC122108.2-201ENST00000611946 526 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 AL008636.1-201ENST00000625038 1018 ntBASIC0.95□□□□□ -2.26
VMP1Q96GC9 RNU6-961P-201ENST00000363893 105 ntBASIC0.94□□□□□ -2.26
VMP1Q96GC9 SNORD115-30-201ENST00000364117 82 ntBASIC0.94□□□□□ -2.26
VMP1Q96GC9 AC138393.2-201ENST00000414742 246 ntBASIC0.94□□□□□ -2.26
VMP1Q96GC9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.94□□□□□ -2.26
VMP1Q96GC9 RPS20P10-201ENST00000451209 253 ntBASIC0.94□□□□□ -2.26
VMP1Q96GC9 MTCO3P10-201ENST00000455912 772 ntBASIC0.94□□□□□ -2.26
VMP1Q96GC9 AC082651.2-201ENST00000496833 166 ntBASIC0.94□□□□□ -2.26
VMP1Q96GC9 PSMC1P5-201ENST00000512850 177 ntBASIC0.94□□□□□ -2.26
VMP1Q96GC9 RNU6-470P-201ENST00000515954 104 ntBASIC0.94□□□□□ -2.26
VMP1Q96GC9 RNU6-559P-201ENST00000516151 98 ntBASIC0.94□□□□□ -2.26
VMP1Q96GC9 RNU6-1337P-201ENST00000516525 95 ntBASIC0.94□□□□□ -2.26
VMP1Q96GC9 RNU2-12P-201ENST00000517216 168 ntBASIC0.94□□□□□ -2.26
VMP1Q96GC9 AC144568.1-201ENST00000520139 137 ntBASIC0.94□□□□□ -2.26
VMP1Q96GC9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.94□□□□□ -2.26
VMP1Q96GC9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.94□□□□□ -2.26
VMP1Q96GC9 AC099654.14-201ENST00000638599 341 ntBASIC0.94□□□□□ -2.26
VMP1Q96GC9 RNU4-38P-201ENST00000364472 129 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 RNU6-926P-201ENST00000384075 107 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 MIR1298-201ENST00000408783 112 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 RBMX2P4-201ENST00000441256 376 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 RPS4XP11-201ENST00000446897 772 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 FCF1P4-201ENST00000448326 183 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 RPL30P15-201ENST00000457129 321 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 Y_RNA.653-201ENST00000459091 95 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 PRDX4P1-201ENST00000507189 574 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 AC055872.1-201ENST00000570978 278 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 MIR3192-201ENST00000584920 77 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 AL355073.2-201ENST00000612106 557 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 MIR6504-201ENST00000613520 61 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 AC025253.1-201ENST00000613623 543 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 AL591926.4-201ENST00000616895 298 ntBASIC0.93□□□□□ -2.26
VMP1Q96GC9 SNORD114-27-201ENST00000363766 70 ntBASIC0.92□□□□□ -2.26
VMP1Q96GC9 Y_RNA.238-201ENST00000364441 102 ntBASIC0.92□□□□□ -2.26
VMP1Q96GC9 RNY3P4-201ENST00000384428 101 ntBASIC0.92□□□□□ -2.26
VMP1Q96GC9 MIR499A-201ENST00000384903 122 ntBASIC0.92□□□□□ -2.26
VMP1Q96GC9 MRPS18CP6-201ENST00000423587 223 ntBASIC0.92□□□□□ -2.26
VMP1Q96GC9 FABP5P4-201ENST00000437203 171 ntBASIC0.92□□□□□ -2.26
VMP1Q96GC9 AC093019.1-201ENST00000443135 252 ntBASIC0.92□□□□□ -2.26
VMP1Q96GC9 snoU13.25-201ENST00000458945 104 ntBASIC0.92□□□□□ -2.26
VMP1Q96GC9 RNU7-169P-201ENST00000459456 61 ntBASIC0.92□□□□□ -2.26
VMP1Q96GC9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.92□□□□□ -2.26
VMP1Q96GC9 AC136628.3-201ENST00000521868 290 ntBASIC0.92□□□□□ -2.26
VMP1Q96GC9 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.92□□□□□ -2.26
VMP1Q96GC9 AC133104.2-201ENST00000615272 193 ntBASIC0.92□□□□□ -2.26
VMP1Q96GC9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.92□□□□□ -2.26
VMP1Q96GC9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.91□□□□□ -2.26
VMP1Q96GC9 HSBP1P2-201ENST00000299671 229 ntBASIC0.91□□□□□ -2.26
VMP1Q96GC9 RNA5SP264-201ENST00000363115 107 ntBASIC0.91□□□□□ -2.26
VMP1Q96GC9 RNY3P11-201ENST00000364153 102 ntBASIC0.91□□□□□ -2.26
VMP1Q96GC9 U8.5-201ENST00000364528 136 ntBASIC0.91□□□□□ -2.26
VMP1Q96GC9 RNU6-1297P-201ENST00000384415 104 ntBASIC0.91□□□□□ -2.26
VMP1Q96GC9 Y_RNA.605-201ENST00000410577 105 ntBASIC0.91□□□□□ -2.26
VMP1Q96GC9 RNA5SP255-201ENST00000516370 107 ntBASIC0.91□□□□□ -2.26
VMP1Q96GC9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.91□□□□□ -2.26
VMP1Q96GC9 AC011604.1-201ENST00000545978 196 ntBASIC0.91□□□□□ -2.26
VMP1Q96GC9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
VMP1Q96GC9 MIR96-201ENST00000362288 78 ntBASIC0.9□□□□□ -2.27
VMP1Q96GC9 Y_RNA.101-201ENST00000363154 102 ntBASIC0.9□□□□□ -2.27
VMP1Q96GC9 Y_RNA.390-201ENST00000383932 102 ntBASIC0.9□□□□□ -2.27
VMP1Q96GC9 SNORD78.2-201ENST00000391076 69 ntBASIC0.9□□□□□ -2.27
VMP1Q96GC9 RNU6-113P-201ENST00000516653 101 ntBASIC0.9□□□□□ -2.27
VMP1Q96GC9 MIR4762-201ENST00000585261 75 ntBASIC0.9□□□□□ -2.27
VMP1Q96GC9 AC240442.1-201ENST00000616055 283 ntBASIC0.9□□□□□ -2.27
VMP1Q96GC9 U2.1-201ENST00000618978 145 ntBASIC0.9□□□□□ -2.27
VMP1Q96GC9 RNU6-490P-201ENST00000362985 107 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 Y_RNA.142-201ENST00000363491 102 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 Y_RNA.191-201ENST00000363972 113 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 Y_RNA.314-201ENST00000365114 102 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 Y_RNA.330-201ENST00000365230 109 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 Y_RNA.387-201ENST00000383918 102 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 MIR559-201ENST00000385188 96 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 MIR136-201ENST00000385207 82 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 AL031003.1-201ENST00000404229 172 ntBASIC0.89□□□□□ -2.27
VMP1Q96GC9 RNU2-54P-201ENST00000410299 190 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms