Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF20Q5VTR2 FAM35CP-201ENST00000554755 2470 ntBASIC3.61□□□□□ -1.83
RNF20Q5VTR2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RNF20Q5VTR2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF20Q5VTR2 ZNF271P-202ENST00000465539 1970 ntBASIC3.6□□□□□ -1.83
RNF20Q5VTR2 AC245060.5-201ENST00000610778 3293 ntBASIC3.6□□□□□ -1.83
RNF20Q5VTR2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RNF20Q5VTR2 MIR518F-201ENST00000384973 87 ntBASIC3.6□□□□□ -1.83
RNF20Q5VTR2 RNU11-5P-201ENST00000391216 129 ntBASIC3.6□□□□□ -1.83
RNF20Q5VTR2 RN7SL504P-201ENST00000494496 287 ntBASIC3.6□□□□□ -1.83
RNF20Q5VTR2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.6□□□□□ -1.83
RNF20Q5VTR2 RN7SKP282-201ENST00000516824 299 ntBASIC3.6□□□□□ -1.83
RNF20Q5VTR2 RNU6-341P-201ENST00000516973 96 ntBASIC3.6□□□□□ -1.83
RNF20Q5VTR2 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.6□□□□□ -1.83
RNF20Q5VTR2 MIR338-201ENST00000636369 67 ntBASIC3.6□□□□□ -1.83
RNF20Q5VTR2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF20Q5VTR2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF20Q5VTR2 SNORA63.5-201ENST00000363548 123 ntBASIC3.59□□□□□ -1.83
RNF20Q5VTR2 SNORA33-201ENST00000363664 130 ntBASIC3.59□□□□□ -1.83
RNF20Q5VTR2 Y_RNA.163-201ENST00000363702 113 ntBASIC3.59□□□□□ -1.83
RNF20Q5VTR2 SNORA51.5-201ENST00000384126 131 ntBASIC3.59□□□□□ -1.83
RNF20Q5VTR2 RNU6-905P-201ENST00000384434 107 ntBASIC3.59□□□□□ -1.83
RNF20Q5VTR2 MIR802-201ENST00000390235 94 ntBASIC3.59□□□□□ -1.83
RNF20Q5VTR2 AL117342.1-201ENST00000404861 406 ntBASIC3.59□□□□□ -1.83
RNF20Q5VTR2 COX6CP6-201ENST00000490840 228 ntBASIC3.59□□□□□ -1.83
RNF20Q5VTR2 SNORA48.11-201ENST00000517015 89 ntBASIC3.59□□□□□ -1.83
RNF20Q5VTR2 AC024614.2-201ENST00000577584 372 ntBASIC3.59□□□□□ -1.83
RNF20Q5VTR2 AL035470.1-201ENST00000622571 220 ntBASIC3.59□□□□□ -1.83
RNF20Q5VTR2 U6.108-201ENST00000637764 58 ntBASIC3.59□□□□□ -1.83
RNF20Q5VTR2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF20Q5VTR2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.59□□□□□ -1.83
RNF20Q5VTR2 AL035425.3-201ENST00000564206 4996 ntBASIC3.59□□□□□ -1.84
RNF20Q5VTR2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
RNF20Q5VTR2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.59□□□□□ -1.84
RNF20Q5VTR2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RNF20Q5VTR2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.58□□□□□ -1.84
RNF20Q5VTR2 RN7SKP220-201ENST00000410611 288 ntBASIC3.58□□□□□ -1.84
RNF20Q5VTR2 RNU2-63P-201ENST00000410792 194 ntBASIC3.58□□□□□ -1.84
RNF20Q5VTR2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.58□□□□□ -1.84
RNF20Q5VTR2 RNU1-142P-201ENST00000516682 145 ntBASIC3.58□□□□□ -1.84
RNF20Q5VTR2 Y_RNA.714-201ENST00000517065 90 ntBASIC3.58□□□□□ -1.84
RNF20Q5VTR2 RNU6-667P-201ENST00000517186 102 ntBASIC3.58□□□□□ -1.84
RNF20Q5VTR2 AL356280.1-201ENST00000603614 379 ntBASIC3.58□□□□□ -1.84
RNF20Q5VTR2 YPEL5P2-201ENST00000605553 359 ntBASIC3.58□□□□□ -1.84
RNF20Q5VTR2 AC007318.2-201ENST00000620999 243 ntBASIC3.58□□□□□ -1.84
RNF20Q5VTR2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF20Q5VTR2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF20Q5VTR2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RNF20Q5VTR2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF20Q5VTR2 RNU6-766P-201ENST00000362478 107 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 SNORA1B-201ENST00000362535 133 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 RNA5SP387-201ENST00000364226 106 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 Y_RNA.328-201ENST00000365208 113 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 Y_RNA.348-201ENST00000365403 103 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 SNORD21-201ENST00000383953 95 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 MIR592-201ENST00000384959 97 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 MIR522-201ENST00000385071 87 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RNF20Q5VTR2 RNA5SP323-201ENST00000391094 133 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 MIR1302-5-201ENST00000408164 150 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF20Q5VTR2 AL049830.1-201ENST00000468034 425 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 AC007536.1-201ENST00000533382 349 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 MIR3944-201ENST00000581277 108 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 MIR5197-201ENST00000583721 112 ntBASIC3.57□□□□□ -1.84
RNF20Q5VTR2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RNF20Q5VTR2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RNF20Q5VTR2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RNF20Q5VTR2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF20Q5VTR2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RNF20Q5VTR2 SNORA71.1-201ENST00000364523 117 ntBASIC3.56□□□□□ -1.84
RNF20Q5VTR2 SNORA54-201ENST00000384281 123 ntBASIC3.56□□□□□ -1.84
RNF20Q5VTR2 SNORA51.10-201ENST00000384418 136 ntBASIC3.56□□□□□ -1.84
RNF20Q5VTR2 MIR887-201ENST00000401258 79 ntBASIC3.56□□□□□ -1.84
RNF20Q5VTR2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF20Q5VTR2 SNORD68-201ENST00000363214 84 ntBASIC3.55□□□□□ -1.84
RNF20Q5VTR2 RNU6-640P-201ENST00000363693 105 ntBASIC3.55□□□□□ -1.84
RNF20Q5VTR2 RNU6-1014P-201ENST00000383940 103 ntBASIC3.55□□□□□ -1.84
RNF20Q5VTR2 SNORA8-201ENST00000384574 139 ntBASIC3.55□□□□□ -1.84
RNF20Q5VTR2 FTH1P12-201ENST00000432137 551 ntBASIC3.55□□□□□ -1.84
RNF20Q5VTR2 RPL39P34-201ENST00000477141 156 ntBASIC3.55□□□□□ -1.84
RNF20Q5VTR2 AC008885.1-201ENST00000514930 301 ntBASIC3.55□□□□□ -1.84
RNF20Q5VTR2 SNORA31.26-201ENST00000517250 137 ntBASIC3.55□□□□□ -1.84
RNF20Q5VTR2 AC107016.2-201ENST00000547968 190 ntBASIC3.55□□□□□ -1.84
RNF20Q5VTR2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF20Q5VTR2 AC087685.1-201ENST00000587507 141 ntBASIC3.55□□□□□ -1.84
RNF20Q5VTR2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RNF20Q5VTR2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.54□□□□□ -1.84
RNF20Q5VTR2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
RNF20Q5VTR2 SNORD114-6-201ENST00000364393 72 ntBASIC3.54□□□□□ -1.84
RNF20Q5VTR2 Y_RNA.242-201ENST00000364473 110 ntBASIC3.54□□□□□ -1.84
RNF20Q5VTR2 SNORA2.2-201ENST00000365473 135 ntBASIC3.54□□□□□ -1.84
RNF20Q5VTR2 MIR561-201ENST00000385216 97 ntBASIC3.54□□□□□ -1.84
RNF20Q5VTR2 MIR548O-201ENST00000408583 114 ntBASIC3.54□□□□□ -1.84
RNF20Q5VTR2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.54□□□□□ -1.84
RNF20Q5VTR2 AC091544.4-201ENST00000555268 342 ntBASIC3.54□□□□□ -1.84
RNF20Q5VTR2 AP001318.4-201ENST00000616637 121 ntBASIC3.54□□□□□ -1.84
RNF20Q5VTR2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RNF20Q5VTR2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
RNF20Q5VTR2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 212.9 ms