Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC046134.1-201ENST00000514454 666 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 RNA5SP461-201ENST00000516451 104 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 MIR2115-201ENST00000516657 100 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 MIR4300-201ENST00000581016 96 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 SNORD92-201ENST00000585078 85 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 AL096861.1-201ENST00000610899 123 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 AL596211.1-201ENST00000569873 2277 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 RNU6-447P-201ENST00000410293 104 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 RNU6-355P-201ENST00000410427 104 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 RNU6-791P-201ENST00000410467 104 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 RNU4-55P-201ENST00000410731 137 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 RNU6-860P-201ENST00000410860 104 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 RNU6-785P-201ENST00000411324 104 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 MLLT10P1-201ENST00000418346 262 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.3□□□□□ -2.46
ABCA4P78363 RNU7-25P-201ENST00000516544 62 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 AC069113.1-201ENST00000517763 267 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 AC090897.1-201ENST00000580909 226 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 POLR3GP1-201ENST00000594073 261 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 AP000753.3-201ENST00000604083 169 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 U6.90-201ENST00000614007 104 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 uc_338.4-201ENST00000616635 176 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 U6.70-201ENST00000620287 104 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 AL589826.1-201ENST00000340697 249 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 AC117470.1-201ENST00000381974 330 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 SNORD38C-201ENST00000384381 69 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.31□□□□□ -2.46
ABCA4P78363 ELOCP4-201ENST00000420090 333 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 AC006210.1-201ENST00000424882 111 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 RPL22P17-201ENST00000438729 315 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 AL031667.1-201ENST00000440222 725 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 Z98949.2-201ENST00000440996 144 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.31□□□□□ -2.46
ABCA4P78363 MTCO3P38-201ENST00000468910 766 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 AC091951.2-201ENST00000500762 203 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 SNORA25.17-201ENST00000517184 124 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 AC024405.2-202ENST00000532731 184 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 U8.6-201ENST00000364939 135 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 RNU6-580P-201ENST00000365159 107 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 RNU6-117P-201ENST00000365415 107 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 RNU6-827P-201ENST00000365553 106 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 SNORA36A-201ENST00000384221 132 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 RNU6-480P-201ENST00000384332 107 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 MIR548L-201ENST00000408303 86 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.31□□□□□ -2.46
ABCA4P78363 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.31□□□□□ -2.46
ABCA4P78363 GMFBP1-201ENST00000467831 427 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.31□□□□□ -2.46
ABCA4P78363 RNU6-559P-201ENST00000516151 98 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 SNORD27.1-201ENST00000516319 72 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 AC245505.1-201ENST00000556398 224 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.31□□□□□ -2.46
ABCA4P78363 AP000942.4-201ENST00000604811 241 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 AC091931.1-201ENST00000623488 728 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 AC027279.3-201ENST00000625055 122 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 MIR382-201ENST00000637119 76 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 AL445984.1-201ENST00000637834 659 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 AC073869.9-201ENST00000641610 120 ntBASIC-0.31□□□□□ -2.46
ABCA4P78363 MTND4P9-201ENST00000507819 1346 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.32□□□□□ -2.46
ABCA4P78363 RNU6-815P-201ENST00000384080 113 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 MIR136-201ENST00000385207 82 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 RNU2-54P-201ENST00000410299 190 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.32□□□□□ -2.46
ABCA4P78363 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.32□□□□□ -2.46
ABCA4P78363 RPL39P25-201ENST00000449384 154 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.32□□□□□ -2.46
ABCA4P78363 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.32□□□□□ -2.46
ABCA4P78363 RNU7-28P-201ENST00000516759 62 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 RNU6-135P-201ENST00000516769 101 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 RNU1-117P-201ENST00000517041 158 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 MTND5P40-201ENST00000559945 246 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 MIR3179-1-201ENST00000578940 84 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 MIR3179-2-201ENST00000579107 84 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 MIR3179-3-201ENST00000579566 84 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 MIR4441-201ENST00000582623 100 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 AC087683.1-201ENST00000591187 441 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 AC121247.2-201ENST00000604776 136 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 AC008536.2-201ENST00000607284 349 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 MIR3179-4-201ENST00000617599 84 ntBASIC-0.32□□□□□ -2.46
ABCA4P78363 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 RNU4-80P-201ENST00000363200 141 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 RNA5SP192-201ENST00000364404 120 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 SNORD24-201ENST00000383884 75 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 RNU6-571P-201ENST00000384128 107 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 RNU6-767P-201ENST00000384132 107 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 U8.17-201ENST00000391292 132 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.33□□□□□ -2.46
ABCA4P78363 RNU2-51P-201ENST00000410708 197 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 RNU6-938P-201ENST00000411285 103 ntBASIC-0.33□□□□□ -2.46
ABCA4P78363 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.33□□□□□ -2.46
ABCA4P78363 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms