Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC009237.7-201ENST00000447357 229 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.96□□□□□ -2.1
HOXC13P31276 snoU13.6-201ENST00000458785 104 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 RNU1-131P-201ENST00000458943 161 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 AC091959.1-201ENST00000495857 238 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.96□□□□□ -2.1
HOXC13P31276 ATP5EP1-201ENST00000510257 156 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.96□□□□□ -2.1
HOXC13P31276 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.96□□□□□ -2.1
HOXC13P31276 MIR4308-201ENST00000580634 81 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 AC005828.6-201ENST00000606610 232 ntBASIC1.96□□□□□ -2.1
HOXC13P31276 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
HOXC13P31276 Y_RNA.81-201ENST00000362997 102 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 RNU6-1130P-201ENST00000365434 107 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 SNORD50.2-201ENST00000365465 70 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 RNU6-20P-201ENST00000384106 107 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 RNU6-541P-201ENST00000384709 110 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 MIR487A-201ENST00000385009 80 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 AL627390.1-201ENST00000396055 340 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 RNU6-321P-201ENST00000410912 106 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 RNU5A-5P-201ENST00000411054 116 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 AC024067.1-201ENST00000426199 223 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 MRPS10P1-201ENST00000448483 130 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 AF186996.7-201ENST00000492781 209 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 AC074133.1-201ENST00000515696 183 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXC13P31276 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXC13P31276 UBL5P4-201ENST00000562584 236 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 MIR5695-201ENST00000579717 85 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 MIR4282-201ENST00000583613 67 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 AC005786.1-201ENST00000588553 154 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 snoU13.31-201ENST00000607291 104 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 AC103810.8-201ENST00000607347 118 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 SCARNA4-201ENST00000629045 128 ntBASIC1.95□□□□□ -2.1
HOXC13P31276 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.94□□□□□ -2.1
HOXC13P31276 MIR378A-201ENST00000362177 66 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 MIR410-201ENST00000362222 80 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 RNU5B-2P-201ENST00000363036 113 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 RNU6-961P-201ENST00000363893 105 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 SNORD116-18-201ENST00000383961 92 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 U8.10-201ENST00000384260 133 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 RNU6-22P-201ENST00000384355 107 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 RNU6-735P-201ENST00000410612 107 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 RNU2-51P-201ENST00000410708 197 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.94□□□□□ -2.1
HOXC13P31276 RPL26P26-201ENST00000480251 434 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 AC005840.1-201ENST00000498412 377 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 SNORA27.4-201ENST00000516650 95 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 MIR3169-201ENST00000578032 83 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 AC006001.4-201ENST00000622243 395 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 AC091895.1-201ENST00000624494 256 ntBASIC1.94□□□□□ -2.1
HOXC13P31276 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
HOXC13P31276 WWP1P1-201ENST00000466609 2769 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HOXC13P31276 RNU6-1175P-201ENST00000365200 107 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 SNORA18.2-201ENST00000383865 132 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 Y_RNA.497-201ENST00000384447 98 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 MIR153-2-201ENST00000385225 87 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 RNU6-1154P-201ENST00000391001 104 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 RNU6-1001P-201ENST00000411265 100 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXC13P31276 POLR2KP2-201ENST00000438155 177 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 UQCRBP2-201ENST00000447827 297 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXC13P31276 RNU6-1114P-201ENST00000516022 107 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 RNA5SP272-201ENST00000516095 111 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HOXC13P31276 AK6P2-201ENST00000549020 471 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 MIR4423-201ENST00000580922 80 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 MIR3935-201ENST00000583472 104 ntBASIC1.93□□□□□ -2.1
HOXC13P31276 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HOXC13P31276 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HOXC13P31276 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HOXC13P31276 UBE2WP1-201ENST00000362030 340 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 Y_RNA.331-201ENST00000365267 102 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 SNORA22C-201ENST00000384614 134 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 RNU6-959P-201ENST00000384671 107 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 RNU6-417P-201ENST00000384712 107 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 Y_RNA.570-201ENST00000384750 101 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 MIR10B-201ENST00000385011 110 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 RNU6-131P-201ENST00000391144 107 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 RNU1-139P-201ENST00000391307 165 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 RNU5E-9P-201ENST00000411164 104 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 AC007395.1-201ENST00000451333 677 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 RNU6-62P-201ENST00000516526 102 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 RN7SKP49-201ENST00000516675 260 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.92□□□□□ -2.1
HOXC13P31276 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.92□□□□□ -2.1
HOXC13P31276 MIR4285-201ENST00000581001 85 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 AL365222.1-201ENST00000614661 98 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 MIR8070-201ENST00000616510 88 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 AC073349.3-201ENST00000617616 186 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 AC084768.2-201ENST00000622736 221 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
HOXC13P31276 SNORD115-32-201ENST00000364079 82 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 Y_RNA.272-201ENST00000364696 102 ntBASIC1.91□□□□□ -2.1
HOXC13P31276 RNU6-818P-201ENST00000364837 108 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms