Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RNU6-643P-201ENST00000384018 107 ntBASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 SNORA19-201ENST00000384737 128 ntBASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 RNU2-55P-201ENST00000411146 174 ntBASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 RPS15AP28-201ENST00000435088 386 ntBASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 AC018634.1-201ENST00000437554 401 ntBASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 AL121914.1-201ENST00000450188 156 ntBASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 AL049873.1-201ENST00000480540 376 ntBASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 RNA5SP282-201ENST00000516355 108 ntBASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 MIR3670-2-201ENST00000582974 65 ntBASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 MIR3670-1-201ENST00000584160 65 ntBASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 MIR3670-3-201ENST00000584855 65 ntBASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 MIR3670-4-201ENST00000612260 65 ntBASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 AC012640.5-201ENST00000623897 319 ntBASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PPARGC1AQ9UBK2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 SNORA5B-201ENST00000363786 132 ntBASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 MIR562-201ENST00000384894 95 ntBASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 MIR15B-201ENST00000385045 98 ntBASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 RNA5SP184-201ENST00000411071 108 ntBASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 RPS4XP11-201ENST00000446897 772 ntBASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 AC096725.1-201ENST00000514266 313 ntBASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 RNU7-99P-201ENST00000516271 62 ntBASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 MIR4319-201ENST00000577285 85 ntBASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 DNAJC19P2-201ENST00000593340 302 ntBASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 SCARNA15.3-201ENST00000626315 122 ntBASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 SCARNA4.1-201ENST00000628597 123 ntBASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 MIR338-201ENST00000636369 67 ntBASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 AL365361.1-201ENST00000566942 3481 ntBASIC2.73□□□□□ -1.97
PPARGC1AQ9UBK2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 RNU4-41P-201ENST00000364426 143 ntBASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 RNU1-52P-201ENST00000384190 164 ntBASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 Y_RNA.488-201ENST00000384403 102 ntBASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 MT-TT-201ENST00000387460 66 ntBASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 AL160236.1-201ENST00000556317 195 ntBASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 AC026271.5-201ENST00000577873 130 ntBASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 MIR4635-201ENST00000583759 79 ntBASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 AL359075.3-201ENST00000613288 217 ntBASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
PPARGC1AQ9UBK2 Y_RNA.203-201ENST00000364106 102 ntBASIC2.71□□□□□ -1.98
PPARGC1AQ9UBK2 Y_RNA.215-201ENST00000364204 112 ntBASIC2.71□□□□□ -1.98
PPARGC1AQ9UBK2 RNU1-91P-201ENST00000364746 163 ntBASIC2.71□□□□□ -1.98
PPARGC1AQ9UBK2 RNU1-138P-201ENST00000384093 164 ntBASIC2.71□□□□□ -1.98
PPARGC1AQ9UBK2 RNU6-417P-201ENST00000384712 107 ntBASIC2.71□□□□□ -1.98
PPARGC1AQ9UBK2 RNU2-52P-201ENST00000410680 190 ntBASIC2.71□□□□□ -1.98
PPARGC1AQ9UBK2 ATP5J2P3-201ENST00000451550 258 ntBASIC2.71□□□□□ -1.98
PPARGC1AQ9UBK2 RNU6-126P-201ENST00000516685 103 ntBASIC2.71□□□□□ -1.98
PPARGC1AQ9UBK2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.71□□□□□ -1.98
PPARGC1AQ9UBK2 AC024995.1-201ENST00000523014 93 ntBASIC2.71□□□□□ -1.98
PPARGC1AQ9UBK2 AC011604.1-201ENST00000545978 196 ntBASIC2.71□□□□□ -1.98
PPARGC1AQ9UBK2 MIR3646-201ENST00000578301 84 ntBASIC2.71□□□□□ -1.98
PPARGC1AQ9UBK2 AC100821.1-201ENST00000523153 2479 ntBASIC2.71□□□□□ -1.98
PPARGC1AQ9UBK2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PPARGC1AQ9UBK2 RNU6-81P-201ENST00000365608 104 ntBASIC2.7□□□□□ -1.98
PPARGC1AQ9UBK2 AC108938.1-201ENST00000451204 136 ntBASIC2.7□□□□□ -1.98
PPARGC1AQ9UBK2 AL109933.2-201ENST00000452651 260 ntBASIC2.7□□□□□ -1.98
PPARGC1AQ9UBK2 AC023449.1-201ENST00000454464 154 ntBASIC2.7□□□□□ -1.98
PPARGC1AQ9UBK2 RNU7-128P-201ENST00000517247 62 ntBASIC2.7□□□□□ -1.98
PPARGC1AQ9UBK2 AL358944.1-201ENST00000528537 144 ntBASIC2.7□□□□□ -1.98
PPARGC1AQ9UBK2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.7□□□□□ -1.98
PPARGC1AQ9UBK2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.7□□□□□ -1.98
PPARGC1AQ9UBK2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PPARGC1AQ9UBK2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PPARGC1AQ9UBK2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
PPARGC1AQ9UBK2 Y_RNA.111-201ENST00000363248 100 ntBASIC2.69□□□□□ -1.98
PPARGC1AQ9UBK2 RNU6-151P-201ENST00000364158 107 ntBASIC2.69□□□□□ -1.98
PPARGC1AQ9UBK2 DEFA7P-201ENST00000382676 285 ntBASIC2.69□□□□□ -1.98
PPARGC1AQ9UBK2 Y_RNA.510-201ENST00000384511 114 ntBASIC2.69□□□□□ -1.98
PPARGC1AQ9UBK2 Y_RNA.568-201ENST00000384742 113 ntBASIC2.69□□□□□ -1.98
PPARGC1AQ9UBK2 SNORA79-201ENST00000408376 140 ntBASIC2.69□□□□□ -1.98
PPARGC1AQ9UBK2 SNORD116-25-201ENST00000516517 92 ntBASIC2.69□□□□□ -1.98
PPARGC1AQ9UBK2 MIR548X2-201ENST00000579776 100 ntBASIC2.69□□□□□ -1.98
PPARGC1AQ9UBK2 AC091178.2-201ENST00000584401 117 ntBASIC2.69□□□□□ -1.98
PPARGC1AQ9UBK2 AL929325.1-201ENST00000603096 117 ntBASIC2.69□□□□□ -1.98
PPARGC1AQ9UBK2 AC073413.2-201ENST00000604332 360 ntBASIC2.69□□□□□ -1.98
PPARGC1AQ9UBK2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.69□□□□□ -1.98
PPARGC1AQ9UBK2 SNORA25.6-201ENST00000364121 118 ntBASIC2.68□□□□□ -1.98
PPARGC1AQ9UBK2 MIR29C-201ENST00000385231 88 ntBASIC2.68□□□□□ -1.98
PPARGC1AQ9UBK2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PPARGC1AQ9UBK2 AL117342.1-201ENST00000404861 406 ntBASIC2.68□□□□□ -1.98
PPARGC1AQ9UBK2 MIR1262-201ENST00000408276 93 ntBASIC2.68□□□□□ -1.98
PPARGC1AQ9UBK2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.68□□□□□ -1.98
PPARGC1AQ9UBK2 CST2P1-201ENST00000425770 87 ntBASIC2.68□□□□□ -1.98
PPARGC1AQ9UBK2 RNU7-94P-201ENST00000459576 63 ntBASIC2.68□□□□□ -1.98
PPARGC1AQ9UBK2 RPS26P45-201ENST00000471748 340 ntBASIC2.68□□□□□ -1.98
PPARGC1AQ9UBK2 RNU6-1041P-201ENST00000516254 102 ntBASIC2.68□□□□□ -1.98
PPARGC1AQ9UBK2 RNU1-142P-201ENST00000516682 145 ntBASIC2.68□□□□□ -1.98
PPARGC1AQ9UBK2 RNU6-1096P-201ENST00000517089 102 ntBASIC2.68□□□□□ -1.98
PPARGC1AQ9UBK2 MIR3162-201ENST00000581818 82 ntBASIC2.68□□□□□ -1.98
PPARGC1AQ9UBK2 AL049779.4-201ENST00000604500 156 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 276 ms