Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 AC245047.8-201ENST00000456455 284 ntBASIC2.91□□□□□ -1.94
ZNF394Q53GI3 AL163195.1-201ENST00000496941 348 ntBASIC2.91□□□□□ -1.94
ZNF394Q53GI3 AC074198.2-201ENST00000508153 258 ntBASIC2.91□□□□□ -1.94
ZNF394Q53GI3 AP002004.2-201ENST00000531656 154 ntBASIC2.91□□□□□ -1.94
ZNF394Q53GI3 GTF3AP2-201ENST00000557014 266 ntBASIC2.91□□□□□ -1.94
ZNF394Q53GI3 AL929325.1-201ENST00000603096 117 ntBASIC2.91□□□□□ -1.94
ZNF394Q53GI3 AL021707.8-201ENST00000609428 183 ntBASIC2.91□□□□□ -1.94
ZNF394Q53GI3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.91□□□□□ -1.94
ZNF394Q53GI3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.91□□□□□ -1.94
ZNF394Q53GI3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
ZNF394Q53GI3 Y_RNA.111-201ENST00000363248 100 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 RNU6-728P-201ENST00000365375 104 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 Y_RNA.357-201ENST00000365487 109 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 RNU1-52P-201ENST00000384190 164 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 Y_RNA.572-201ENST00000384757 98 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 RNU11-3P-201ENST00000391111 133 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 MIR1283-2-201ENST00000408621 87 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 SNORA9.3-201ENST00000516383 129 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.9□□□□□ -1.95
ZNF394Q53GI3 AC109810.1-201ENST00000534066 224 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 MIR4431-201ENST00000579990 94 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 MIR3605-201ENST00000583214 100 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 JPX_2.1-201ENST00000614161 69 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 AC022513.1-201ENST00000624512 117 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
ZNF394Q53GI3 AC007336.1-201ENST00000576365 3828 ntBASIC2.9□□□□□ -1.95
ZNF394Q53GI3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.9□□□□□ -1.95
ZNF394Q53GI3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ZNF394Q53GI3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
ZNF394Q53GI3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
ZNF394Q53GI3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ZNF394Q53GI3 SNORA33-201ENST00000363664 130 ntBASIC2.89□□□□□ -1.95
ZNF394Q53GI3 AL606845.1-201ENST00000404881 255 ntBASIC2.89□□□□□ -1.95
ZNF394Q53GI3 MIR548M-201ENST00000408260 86 ntBASIC2.89□□□□□ -1.95
ZNF394Q53GI3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.89□□□□□ -1.95
ZNF394Q53GI3 SCARNA8-201ENST00000515924 131 ntBASIC2.89□□□□□ -1.95
ZNF394Q53GI3 RNU6-126P-201ENST00000516685 103 ntBASIC2.89□□□□□ -1.95
ZNF394Q53GI3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.89□□□□□ -1.95
ZNF394Q53GI3 ELOCP29-201ENST00000588193 334 ntBASIC2.89□□□□□ -1.95
ZNF394Q53GI3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
ZNF394Q53GI3 AL590004.2-201ENST00000404787 371 ntBASIC2.88□□□□□ -1.95
ZNF394Q53GI3 MIR1278-201ENST00000408753 81 ntBASIC2.88□□□□□ -1.95
ZNF394Q53GI3 RNU2-52P-201ENST00000410680 190 ntBASIC2.88□□□□□ -1.95
ZNF394Q53GI3 RNU6-394P-201ENST00000410735 107 ntBASIC2.88□□□□□ -1.95
ZNF394Q53GI3 RNA5SP21-201ENST00000410917 96 ntBASIC2.88□□□□□ -1.95
ZNF394Q53GI3 Y_RNA.621-201ENST00000411065 96 ntBASIC2.88□□□□□ -1.95
ZNF394Q53GI3 RNU2-55P-201ENST00000411146 174 ntBASIC2.88□□□□□ -1.95
ZNF394Q53GI3 SUMO1P3-201ENST00000439961 304 ntBASIC2.88□□□□□ -1.95
ZNF394Q53GI3 RNU6-453P-201ENST00000516819 85 ntBASIC2.88□□□□□ -1.95
ZNF394Q53GI3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.88□□□□□ -1.95
ZNF394Q53GI3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
ZNF394Q53GI3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.87□□□□□ -1.95
ZNF394Q53GI3 AC245060.5-201ENST00000610778 3293 ntBASIC2.87□□□□□ -1.95
ZNF394Q53GI3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ZNF394Q53GI3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.87□□□□□ -1.95
ZNF394Q53GI3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ZNF394Q53GI3 AC233266.1-201ENST00000454518 96 ntBASIC2.87□□□□□ -1.95
ZNF394Q53GI3 RN7SL297P-201ENST00000483161 293 ntBASIC2.87□□□□□ -1.95
ZNF394Q53GI3 Y_RNA.714-201ENST00000517065 90 ntBASIC2.87□□□□□ -1.95
ZNF394Q53GI3 SNORD14A-201ENST00000606526 91 ntBASIC2.87□□□□□ -1.95
ZNF394Q53GI3 AL365434.2-201ENST00000607979 234 ntBASIC2.87□□□□□ -1.95
ZNF394Q53GI3 AC242852.1-201ENST00000612151 96 ntBASIC2.87□□□□□ -1.95
ZNF394Q53GI3 AC244015.1-201ENST00000622301 99 ntBASIC2.87□□□□□ -1.95
ZNF394Q53GI3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF394Q53GI3 MIR203B-201ENST00000636080 86 ntBASIC2.87□□□□□ -1.95
ZNF394Q53GI3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ZNF394Q53GI3 SNORA5B-201ENST00000363786 132 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 RNU4-84P-201ENST00000364200 139 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 Y_RNA.796-201ENST00000364268 102 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 Y_RNA.242-201ENST00000364473 110 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 Y_RNA.267-201ENST00000364679 109 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 Y_RNA.272-201ENST00000364696 102 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 Y_RNA.799-201ENST00000364992 102 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 RNU6-746P-201ENST00000384112 109 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 MIR597-201ENST00000384968 97 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 RNU4-43P-201ENST00000410628 137 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 AC011753.1-201ENST00000451001 220 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 SNORD109B-201ENST00000458961 67 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 SNORD109A-201ENST00000459128 67 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 HMGN1P7-201ENST00000491722 313 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 AC107027.2-201ENST00000512197 115 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 RNU6-1291P-201ENST00000516591 104 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 RNA5SP82-201ENST00000516707 92 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 RNU2-56P-201ENST00000516826 190 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 RPL23AP91-201ENST00000569211 455 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 MIR4635-201ENST00000583759 79 ntBASIC2.86□□□□□ -1.95
ZNF394Q53GI3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF394Q53GI3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF394Q53GI3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.86□□□□□ -1.95
ZNF394Q53GI3 RNU6-1209P-201ENST00000363655 107 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 RNU1-51P-201ENST00000365345 176 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 MIR15B-201ENST00000385045 98 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
ZNF394Q53GI3 SNORA48.1-201ENST00000390879 135 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 Y_RNA.580-201ENST00000391004 95 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 SNORA79-201ENST00000408376 140 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 RNU5E-9P-201ENST00000411164 104 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.85□□□□□ -1.95
ZNF394Q53GI3 HMGN2P3-201ENST00000433603 273 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms