Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC087685.1-201ENST00000587507 141 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 AC245008.1-201ENST00000608123 476 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 MIR6851-201ENST00000617060 67 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 AL662814.1-201ENST00000617364 121 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 AC022418.1-201ENST00000624118 445 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 RNU6-428P-201ENST00000362942 107 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 RNU4-1-201ENST00000363925 141 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 SNORA22B-201ENST00000383876 138 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 RNU6-641P-201ENST00000384006 107 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 SNORA67.2-201ENST00000384300 149 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 MIR563-201ENST00000385080 79 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 SNORD83B-201ENST00000386745 93 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 AC243428.1-201ENST00000421099 264 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.27□□□□□ -2.45
ABCA4P78363 MTCO2P23-201ENST00000425216 680 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 BX276092.1-201ENST00000427368 251 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 SUMO1P3-201ENST00000439961 304 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 RNU6-180P-201ENST00000516697 61 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 AC010376.1-201ENST00000522101 334 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 HIF1AP1-201ENST00000553642 175 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 AL355375.2-201ENST00000574825 175 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 MIR3118-1-201ENST00000581787 76 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 MIR4499-201ENST00000584834 69 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 MIR4791-201ENST00000607666 84 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 AL162726.3-218ENST00000636401 95 ntBASIC-0.27□□□□□ -2.45
ABCA4P78363 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.27□□□□□ -2.45
ABCA4P78363 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 RNU6-224P-201ENST00000384055 107 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 MIR196A1-201ENST00000388006 70 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
ABCA4P78363 MIR892B-201ENST00000401279 77 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 AC008134.1-201ENST00000420943 193 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 MTND1P14-201ENST00000427400 950 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.28□□□□□ -2.45
ABCA4P78363 AC025647.1-201ENST00000517879 253 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 AC104383.1-201ENST00000530297 370 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 MIR4306-201ENST00000583390 91 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 AC234772.3-201ENST00000602277 528 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 AC006435.5-201ENST00000624486 112 ntBASIC-0.28□□□□□ -2.45
ABCA4P78363 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 SNORD45.3-201ENST00000363836 72 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 SNORD14.1-201ENST00000365609 90 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.29□□□□□ -2.46
ABCA4P78363 AL358934.1-201ENST00000432346 324 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA4P78363 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA4P78363 RNU7-134P-201ENST00000458997 64 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 RNU2-11P-201ENST00000459191 187 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 U8.21-201ENST00000459536 136 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA4P78363 RNU6-344P-201ENST00000516635 111 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.29□□□□□ -2.46
ABCA4P78363 MIR4771-2-201ENST00000577758 74 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 MIR3152-201ENST00000579801 74 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 MIR4771-1-201ENST00000582617 74 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 AC084368.1-201ENST00000620935 65 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 AC091948.2-201ENST00000636510 279 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 SNORA63.5-201ENST00000363548 123 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 RNU6-597P-201ENST00000365620 102 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 MIR582-201ENST00000365731 98 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 MIR487A-201ENST00000385009 80 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 AL049545.1-201ENST00000401856 572 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 MIR1185-2-201ENST00000408687 86 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 AL390729.2-201ENST00000416137 156 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
ABCA4P78363 HSFY5P-201ENST00000453726 309 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.29□□□□□ -2.46
ABCA4P78363 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 AF250324.2-201ENST00000608299 610 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 MIR7844-201ENST00000616161 122 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 uc_338.36-201ENST00000622331 158 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 AC005609.4-201ENST00000625071 447 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.29□□□□□ -2.46
ABCA4P78363 AC010332.2-201ENST00000613083 1904 ntBASIC-0.29□□□□□ -2.46
ABCA4P78363 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 MRPS10P2-201ENST00000431226 381 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 MTND1P17-201ENST00000448961 204 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 AL138752.1-201ENST00000452964 351 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 ZNF114P1-201ENST00000453500 292 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 AC023449.1-201ENST00000454464 154 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 RPS29P27-201ENST00000463711 170 ntBASIC-0.3□□□□□ -2.46
ABCA4P78363 AC010493.1-201ENST00000513479 292 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms