Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 MIR6079-201ENST00000635807 62 ntBASIC2.52□□□□□ -2.01
PTX3P26022 AC080100.1-201ENST00000624239 5356 ntBASIC2.51□□□□□ -2.01
PTX3P26022 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PTX3P26022 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PTX3P26022 RNU6-862P-201ENST00000362804 105 ntBASIC2.51□□□□□ -2.01
PTX3P26022 RNU4-41P-201ENST00000364426 143 ntBASIC2.51□□□□□ -2.01
PTX3P26022 RNU6-746P-201ENST00000384112 109 ntBASIC2.51□□□□□ -2.01
PTX3P26022 AC091021.1-201ENST00000468051 388 ntBASIC2.51□□□□□ -2.01
PTX3P26022 SNORA31.11-201ENST00000516528 139 ntBASIC2.51□□□□□ -2.01
PTX3P26022 RNU6-1007P-201ENST00000516586 107 ntBASIC2.51□□□□□ -2.01
PTX3P26022 RNU6-341P-201ENST00000516973 96 ntBASIC2.51□□□□□ -2.01
PTX3P26022 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.51□□□□□ -2.01
PTX3P26022 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.51□□□□□ -2.01
PTX3P26022 MIR5092-201ENST00000583139 88 ntBASIC2.51□□□□□ -2.01
PTX3P26022 AL929325.1-201ENST00000603096 117 ntBASIC2.51□□□□□ -2.01
PTX3P26022 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PTX3P26022 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PTX3P26022 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PTX3P26022 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PTX3P26022 Y_RNA.357-201ENST00000365487 109 ntBASIC2.5□□□□□ -2.01
PTX3P26022 SNORA8-201ENST00000384574 139 ntBASIC2.5□□□□□ -2.01
PTX3P26022 RNA5SP465-201ENST00000391195 109 ntBASIC2.5□□□□□ -2.01
PTX3P26022 MIR1278-201ENST00000408753 81 ntBASIC2.5□□□□□ -2.01
PTX3P26022 COTL1P1-201ENST00000422309 375 ntBASIC2.5□□□□□ -2.01
PTX3P26022 RPL23AP83-201ENST00000434984 473 ntBASIC2.5□□□□□ -2.01
PTX3P26022 RPS12P2-201ENST00000439728 269 ntBASIC2.5□□□□□ -2.01
PTX3P26022 AC245047.8-201ENST00000456455 284 ntBASIC2.5□□□□□ -2.01
PTX3P26022 RNA5SP82-201ENST00000516707 92 ntBASIC2.5□□□□□ -2.01
PTX3P26022 RNU6-453P-201ENST00000516819 85 ntBASIC2.5□□□□□ -2.01
PTX3P26022 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.5□□□□□ -2.01
PTX3P26022 AC109810.1-201ENST00000534066 224 ntBASIC2.5□□□□□ -2.01
PTX3P26022 AL021707.8-201ENST00000609428 183 ntBASIC2.5□□□□□ -2.01
PTX3P26022 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PTX3P26022 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
PTX3P26022 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
PTX3P26022 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PTX3P26022 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
PTX3P26022 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PTX3P26022 MIR483-201ENST00000385070 76 ntBASIC2.49□□□□□ -2.01
PTX3P26022 RNA5SP210-201ENST00000391034 120 ntBASIC2.49□□□□□ -2.01
PTX3P26022 AL606845.1-201ENST00000404881 255 ntBASIC2.49□□□□□ -2.01
PTX3P26022 AC099677.2-201ENST00000436385 175 ntBASIC2.49□□□□□ -2.01
PTX3P26022 AC023449.1-201ENST00000454464 154 ntBASIC2.49□□□□□ -2.01
PTX3P26022 RN7SKP132-201ENST00000516001 208 ntBASIC2.49□□□□□ -2.01
PTX3P26022 RNA5SP282-201ENST00000516355 108 ntBASIC2.49□□□□□ -2.01
PTX3P26022 RNU6-255P-201ENST00000516957 105 ntBASIC2.49□□□□□ -2.01
PTX3P26022 GTF3AP2-201ENST00000557014 266 ntBASIC2.49□□□□□ -2.01
PTX3P26022 AC074050.1-201ENST00000563247 211 ntBASIC2.49□□□□□ -2.01
PTX3P26022 MIR3144-201ENST00000579460 79 ntBASIC2.49□□□□□ -2.01
PTX3P26022 MIR4431-201ENST00000579990 94 ntBASIC2.49□□□□□ -2.01
PTX3P26022 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PTX3P26022 Y_RNA.272-201ENST00000364696 102 ntBASIC2.48□□□□□ -2.01
PTX3P26022 RNU6-728P-201ENST00000365375 104 ntBASIC2.48□□□□□ -2.01
PTX3P26022 Y_RNA.580-201ENST00000391004 95 ntBASIC2.48□□□□□ -2.01
PTX3P26022 RNU5E-9P-201ENST00000411164 104 ntBASIC2.48□□□□□ -2.01
PTX3P26022 BX510359.4-201ENST00000423750 193 ntBASIC2.48□□□□□ -2.01
PTX3P26022 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.48□□□□□ -2.01
PTX3P26022 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.48□□□□□ -2.01
PTX3P26022 AL163195.1-201ENST00000496941 348 ntBASIC2.48□□□□□ -2.01
PTX3P26022 RNA5SP402-201ENST00000517148 110 ntBASIC2.48□□□□□ -2.01
PTX3P26022 AC022513.1-201ENST00000624512 117 ntBASIC2.48□□□□□ -2.01
PTX3P26022 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.48□□□□□ -2.01
PTX3P26022 AC007336.1-201ENST00000576365 3828 ntBASIC2.47□□□□□ -2.01
PTX3P26022 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTX3P26022 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTX3P26022 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTX3P26022 RNU6-859P-201ENST00000362728 107 ntBASIC2.47□□□□□ -2.01
PTX3P26022 SNORA33-201ENST00000363664 130 ntBASIC2.47□□□□□ -2.01
PTX3P26022 RNU4-84P-201ENST00000364200 139 ntBASIC2.47□□□□□ -2.01
PTX3P26022 SNORA67.1-201ENST00000364749 141 ntBASIC2.47□□□□□ -2.01
PTX3P26022 MIR518A2-201ENST00000384966 87 ntBASIC2.47□□□□□ -2.01
PTX3P26022 MT-TT-201ENST00000387460 66 ntBASIC2.47□□□□□ -2.01
PTX3P26022 HMGN2P39-201ENST00000398005 273 ntBASIC2.47□□□□□ -2.01
PTX3P26022 RNU2-55P-201ENST00000411146 174 ntBASIC2.47□□□□□ -2.01
PTX3P26022 SEPT7P4-201ENST00000437076 306 ntBASIC2.47□□□□□ -2.01
PTX3P26022 SNORD109B-201ENST00000458961 67 ntBASIC2.47□□□□□ -2.01
PTX3P26022 SNORD109A-201ENST00000459128 67 ntBASIC2.47□□□□□ -2.01
PTX3P26022 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.47□□□□□ -2.01
PTX3P26022 RNU1-104P-201ENST00000517280 175 ntBASIC2.47□□□□□ -2.01
PTX3P26022 AP002004.2-201ENST00000531656 154 ntBASIC2.47□□□□□ -2.01
PTX3P26022 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.47□□□□□ -2.01
PTX3P26022 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.47□□□□□ -2.01
PTX3P26022 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.47□□□□□ -2.01
PTX3P26022 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.47□□□□□ -2.01
PTX3P26022 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTX3P26022 Y_RNA.796-201ENST00000364268 102 ntBASIC2.46□□□□□ -2.02
PTX3P26022 Y_RNA.799-201ENST00000364992 102 ntBASIC2.46□□□□□ -2.02
PTX3P26022 RNY1P5-201ENST00000383890 115 ntBASIC2.46□□□□□ -2.02
PTX3P26022 RNU6-239P-201ENST00000390990 99 ntBASIC2.46□□□□□ -2.02
PTX3P26022 MIR1283-2-201ENST00000408621 87 ntBASIC2.46□□□□□ -2.02
PTX3P26022 RNU4-43P-201ENST00000410628 137 ntBASIC2.46□□□□□ -2.02
PTX3P26022 AL121914.1-201ENST00000450188 156 ntBASIC2.46□□□□□ -2.02
PTX3P26022 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.46□□□□□ -2.02
PTX3P26022 AC069114.2-201ENST00000604699 304 ntBASIC2.46□□□□□ -2.02
PTX3P26022 MIR7106-201ENST00000612419 65 ntBASIC2.46□□□□□ -2.02
PTX3P26022 JPX_2.1-201ENST00000614161 69 ntBASIC2.46□□□□□ -2.02
PTX3P26022 AC006386.2-201ENST00000624491 75 ntBASIC2.46□□□□□ -2.02
PTX3P26022 AC012005.1-201ENST00000624575 75 ntBASIC2.46□□□□□ -2.02
PTX3P26022 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.46□□□□□ -2.02
PTX3P26022 MTND1P7-201ENST00000632801 297 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms