Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 MIR7153-201ENST00000637758 57 ntBASIC3.32□□□□□ -1.88
PTPRAP18433 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPRAP18433 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPRAP18433 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPRAP18433 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRAP18433 MAPK10-322ENST00000641485 4530 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 CD24P4-201ENST00000382840 243 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 MIR548A1-201ENST00000385041 97 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 MIR9-1-201ENST00000385198 89 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 MIRLET7F2-201ENST00000385277 83 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 Y_RNA.621-201ENST00000411065 96 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 Y_RNA.649-201ENST00000459077 103 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 RNU6-365P-201ENST00000517113 106 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 MIR3199-1-201ENST00000582434 88 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 AC025166.1-201ENST00000612411 163 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 U6.73-201ENST00000619194 103 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRAP18433 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PTPRAP18433 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRAP18433 AL355596.1-201ENST00000565399 3996 ntBASIC3.31□□□□□ -1.88
PTPRAP18433 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
PTPRAP18433 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTPRAP18433 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PTPRAP18433 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PTPRAP18433 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PTPRAP18433 SNORD56.3-201ENST00000363507 71 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 Y_RNA.309-201ENST00000365046 111 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 RNU6-880P-201ENST00000384526 107 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 AL138827.1-201ENST00000402666 306 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 MIR1253-201ENST00000408273 105 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPRAP18433 RN7SL633P-201ENST00000488974 297 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 NDUFA4P2-201ENST00000489989 244 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 SNORA64.4-201ENST00000516632 81 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 RNU6-126P-201ENST00000516685 103 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 MIR3129-201ENST00000581095 76 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 MIR4435-1-201ENST00000582552 80 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPRAP18433 AC073413.2-201ENST00000604332 360 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPRAP18433 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 MIR7515-201ENST00000637837 67 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 AC080128.1-201ENST00000474389 1917 ntBASIC3.3□□□□□ -1.88
PTPRAP18433 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PTPRAP18433 AC009487.2-201ENST00000420969 6821 ntBASIC3.29□□□□□ -1.88
PTPRAP18433 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
PTPRAP18433 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTPRAP18433 Y_RNA.346-201ENST00000365385 112 ntBASIC3.29□□□□□ -1.88
PTPRAP18433 U6atac.2-201ENST00000408644 118 ntBASIC3.29□□□□□ -1.88
PTPRAP18433 MICF-203ENST00000432679 129 ntBASIC3.29□□□□□ -1.88
PTPRAP18433 AC009969.1-201ENST00000438726 172 ntBASIC3.29□□□□□ -1.88
PTPRAP18433 SNORA4.4-201ENST00000515921 135 ntBASIC3.29□□□□□ -1.88
PTPRAP18433 RNU6-991P-201ENST00000516168 107 ntBASIC3.29□□□□□ -1.88
PTPRAP18433 RNU6-856P-201ENST00000516959 98 ntBASIC3.29□□□□□ -1.88
PTPRAP18433 SCARNA3-201ENST00000517097 143 ntBASIC3.29□□□□□ -1.88
PTPRAP18433 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
PTPRAP18433 U2.20-201ENST00000613956 192 ntBASIC3.29□□□□□ -1.88
PTPRAP18433 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PTPRAP18433 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTPRAP18433 MTND5P18-201ENST00000445624 1801 ntBASIC3.28□□□□□ -1.88
PTPRAP18433 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTPRAP18433 RNU6-859P-201ENST00000362728 107 ntBASIC3.28□□□□□ -1.88
PTPRAP18433 RNU1-23P-201ENST00000363361 144 ntBASIC3.28□□□□□ -1.88
PTPRAP18433 SNORA1-201ENST00000384107 130 ntBASIC3.28□□□□□ -1.88
PTPRAP18433 AF228730.3-201ENST00000436691 102 ntBASIC3.28□□□□□ -1.88
PTPRAP18433 HMGN2P34-201ENST00000437647 269 ntBASIC3.28□□□□□ -1.88
PTPRAP18433 MRPS17P9-201ENST00000511924 393 ntBASIC3.28□□□□□ -1.88
PTPRAP18433 IGKV1-22-201ENST00000524313 326 ntBASIC3.28□□□□□ -1.88
PTPRAP18433 AC091544.4-201ENST00000555268 342 ntBASIC3.28□□□□□ -1.88
PTPRAP18433 MIR3186-201ENST00000577404 85 ntBASIC3.28□□□□□ -1.88
PTPRAP18433 AC107294.3-201ENST00000609211 526 ntBASIC3.28□□□□□ -1.88
PTPRAP18433 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.28□□□□□ -1.88
PTPRAP18433 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PTPRAP18433 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
PTPRAP18433 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PTPRAP18433 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PTPRAP18433 MIR340-201ENST00000362125 95 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 MIR450A1-201ENST00000362262 91 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 MIR520G-201ENST00000385064 90 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 FO393413.1-201ENST00000402892 195 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 RNU6-1186P-201ENST00000410429 97 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 RNA5SP21-201ENST00000410917 96 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 AC123900.1-201ENST00000420390 96 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 AC060773.1-201ENST00000421698 310 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 MTATP6P21-201ENST00000440681 189 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 AL021397.1-201ENST00000451806 248 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 RN7SL442P-201ENST00000473804 320 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 AC093259.1-201ENST00000509755 300 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 AC096725.1-201ENST00000514266 313 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.27□□□□□ -1.89
PTPRAP18433 MIR7157-201ENST00000635801 60 ntBASIC3.27□□□□□ -1.89
PTPRAP18433 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.27□□□□□ -1.89
PTPRAP18433 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PTPRAP18433 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
PTPRAP18433 Y_RNA.332-201ENST00000365271 113 ntBASIC3.26□□□□□ -1.89
PTPRAP18433 SNORA12.1-201ENST00000390873 148 ntBASIC3.26□□□□□ -1.89
PTPRAP18433 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.26□□□□□ -1.89
PTPRAP18433 AC244505.4-201ENST00000434905 287 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms