Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.26□□□□□ -2.37
SOD1P00441 AL392103.1-201ENST00000447000 198 ntBASIC0.26□□□□□ -2.37
SOD1P00441 PCNPP5-201ENST00000452246 481 ntBASIC0.26□□□□□ -2.37
SOD1P00441 AC019235.1-201ENST00000503847 207 ntBASIC0.26□□□□□ -2.37
SOD1P00441 AF235103.2-201ENST00000525753 346 ntBASIC0.26□□□□□ -2.37
SOD1P00441 AL512360.1-201ENST00000555346 234 ntBASIC0.26□□□□□ -2.37
SOD1P00441 AC005730.3-201ENST00000583067 366 ntBASIC0.26□□□□□ -2.37
SOD1P00441 AL162413.1-201ENST00000603198 110 ntBASIC0.26□□□□□ -2.37
SOD1P00441 AC100812.1-201ENST00000607622 580 ntBASIC0.26□□□□□ -2.37
SOD1P00441 AL357075.2-201ENST00000614906 189 ntBASIC0.26□□□□□ -2.37
SOD1P00441 MIR6516-201ENST00000630554 81 ntBASIC0.26□□□□□ -2.37
SOD1P00441 AC090582.1-201ENST00000636321 199 ntBASIC0.26□□□□□ -2.37
SOD1P00441 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SOD1P00441 RNU6-1252P-201ENST00000363054 104 ntBASIC0.25□□□□□ -2.37
SOD1P00441 Y_RNA.106-201ENST00000363189 100 ntBASIC0.25□□□□□ -2.37
SOD1P00441 SNORA25.3-201ENST00000363205 127 ntBASIC0.25□□□□□ -2.37
SOD1P00441 RNU6-454P-201ENST00000364292 107 ntBASIC0.25□□□□□ -2.37
SOD1P00441 RNU6-259P-201ENST00000383999 107 ntBASIC0.25□□□□□ -2.37
SOD1P00441 MIR15B-201ENST00000385045 98 ntBASIC0.25□□□□□ -2.37
SOD1P00441 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.25□□□□□ -2.37
SOD1P00441 PIGPP3-201ENST00000425307 415 ntBASIC0.25□□□□□ -2.37
SOD1P00441 UQCRBP2-201ENST00000447827 297 ntBASIC0.25□□□□□ -2.37
SOD1P00441 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.25□□□□□ -2.37
SOD1P00441 RNU7-43P-201ENST00000516554 64 ntBASIC0.25□□□□□ -2.37
SOD1P00441 AC023442.1-201ENST00000531247 422 ntBASIC0.25□□□□□ -2.37
SOD1P00441 RNU6-222P-201ENST00000362438 107 ntBASIC0.24□□□□□ -2.37
SOD1P00441 Y_RNA.36-201ENST00000362602 112 ntBASIC0.24□□□□□ -2.37
SOD1P00441 SNORD113.3-201ENST00000364630 78 ntBASIC0.24□□□□□ -2.37
SOD1P00441 Y_RNA.414-201ENST00000384011 101 ntBASIC0.24□□□□□ -2.37
SOD1P00441 RNU6-1297P-201ENST00000384415 104 ntBASIC0.24□□□□□ -2.37
SOD1P00441 MIR136-201ENST00000385207 82 ntBASIC0.24□□□□□ -2.37
SOD1P00441 MIR1302-7-201ENST00000408841 72 ntBASIC0.24□□□□□ -2.37
SOD1P00441 RNU6-177P-201ENST00000411257 104 ntBASIC0.24□□□□□ -2.37
SOD1P00441 MTCO2P12-201ENST00000427426 682 ntBASIC0.24□□□□□ -2.37
SOD1P00441 MTND4LP16-201ENST00000440828 295 ntBASIC0.24□□□□□ -2.37
SOD1P00441 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.24□□□□□ -2.37
SOD1P00441 AC067940.1-201ENST00000458411 300 ntBASIC0.24□□□□□ -2.37
SOD1P00441 Y_RNA.706-201ENST00000516933 99 ntBASIC0.24□□□□□ -2.37
SOD1P00441 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
SOD1P00441 AC018448.1-201ENST00000552843 316 ntBASIC0.24□□□□□ -2.37
SOD1P00441 AC011195.1-201ENST00000578177 177 ntBASIC0.24□□□□□ -2.37
SOD1P00441 MIR5701-3-201ENST00000578890 82 ntBASIC0.24□□□□□ -2.37
SOD1P00441 MIR4764-201ENST00000580680 88 ntBASIC0.24□□□□□ -2.37
SOD1P00441 MIR4273-201ENST00000582824 84 ntBASIC0.24□□□□□ -2.37
SOD1P00441 MIR5701-1-201ENST00000585138 82 ntBASIC0.24□□□□□ -2.37
SOD1P00441 NBR2-204ENST00000587322 63 ntBASIC0.24□□□□□ -2.37
SOD1P00441 RNU6-94P-201ENST00000607728 107 ntBASIC0.24□□□□□ -2.37
SOD1P00441 MIR5701-2-201ENST00000615634 82 ntBASIC0.24□□□□□ -2.37
SOD1P00441 AC104260.1-201ENST00000616660 539 ntBASIC0.24□□□□□ -2.37
SOD1P00441 AL591926.4-201ENST00000616895 298 ntBASIC0.24□□□□□ -2.37
SOD1P00441 RNU6-451P-201ENST00000362921 107 ntBASIC0.23□□□□□ -2.37
SOD1P00441 RNY3P3-201ENST00000363816 102 ntBASIC0.23□□□□□ -2.37
SOD1P00441 SNORD14.1-201ENST00000365609 90 ntBASIC0.23□□□□□ -2.37
SOD1P00441 SNORD105-201ENST00000386910 85 ntBASIC0.23□□□□□ -2.37
SOD1P00441 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.23□□□□□ -2.37
SOD1P00441 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.23□□□□□ -2.37
SOD1P00441 AC002350.1-201ENST00000490759 375 ntBASIC0.23□□□□□ -2.37
SOD1P00441 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.23□□□□□ -2.37
SOD1P00441 RNU6-1281P-201ENST00000516223 105 ntBASIC0.23□□□□□ -2.37
SOD1P00441 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
SOD1P00441 OSBPL9P5-201ENST00000542581 171 ntBASIC0.23□□□□□ -2.37
SOD1P00441 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.23□□□□□ -2.37
SOD1P00441 AC245008.1-201ENST00000608123 476 ntBASIC0.23□□□□□ -2.37
SOD1P00441 AF250324.2-201ENST00000608299 610 ntBASIC0.23□□□□□ -2.37
SOD1P00441 AC090625.1-201ENST00000357130 210 ntBASIC0.22□□□□□ -2.37
SOD1P00441 SNORD68-201ENST00000363214 84 ntBASIC0.22□□□□□ -2.37
SOD1P00441 RNU6-483P-201ENST00000384088 108 ntBASIC0.22□□□□□ -2.37
SOD1P00441 RNU6-1042P-201ENST00000384204 107 ntBASIC0.22□□□□□ -2.37
SOD1P00441 MIR193B-201ENST00000384907 83 ntBASIC0.22□□□□□ -2.37
SOD1P00441 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
SOD1P00441 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.22□□□□□ -2.37
SOD1P00441 RNU2-66P-201ENST00000410650 161 ntBASIC0.22□□□□□ -2.37
SOD1P00441 AL354751.2-201ENST00000415471 210 ntBASIC0.22□□□□□ -2.37
SOD1P00441 MTND1P4-201ENST00000435196 415 ntBASIC0.22□□□□□ -2.37
SOD1P00441 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.22□□□□□ -2.37
SOD1P00441 ELOCP24-201ENST00000456370 334 ntBASIC0.22□□□□□ -2.37
SOD1P00441 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.22□□□□□ -2.37
SOD1P00441 AC104695.3-201ENST00000604052 296 ntBASIC0.22□□□□□ -2.37
SOD1P00441 MIR3674-201ENST00000636576 68 ntBASIC0.22□□□□□ -2.37
SOD1P00441 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
SOD1P00441 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
SOD1P00441 Y_RNA.364-201ENST00000365532 101 ntBASIC0.21□□□□□ -2.38
SOD1P00441 Y_RNA.498-201ENST00000384460 102 ntBASIC0.21□□□□□ -2.38
SOD1P00441 RNU6-306P-201ENST00000384617 107 ntBASIC0.21□□□□□ -2.38
SOD1P00441 MIR516B2-201ENST00000385190 85 ntBASIC0.21□□□□□ -2.38
SOD1P00441 MIR140-201ENST00000385282 100 ntBASIC0.21□□□□□ -2.38
SOD1P00441 MIR190B-201ENST00000401119 79 ntBASIC0.21□□□□□ -2.38
SOD1P00441 RNU6-1304P-201ENST00000411374 106 ntBASIC0.21□□□□□ -2.38
SOD1P00441 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.21□□□□□ -2.38
SOD1P00441 SNORA68.3-201ENST00000515906 83 ntBASIC0.21□□□□□ -2.38
SOD1P00441 RNU6-63P-201ENST00000516690 95 ntBASIC0.21□□□□□ -2.38
SOD1P00441 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.21□□□□□ -2.38
SOD1P00441 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
SOD1P00441 RN7SKP299-201ENST00000606679 301 ntBASIC0.21□□□□□ -2.38
SOD1P00441 Z99129.1-201ENST00000612510 255 ntBASIC0.21□□□□□ -2.38
SOD1P00441 AC078883.4-201ENST00000623218 367 ntBASIC0.21□□□□□ -2.38
SOD1P00441 MIR3974-201ENST00000637126 96 ntBASIC0.21□□□□□ -2.38
SOD1P00441 SNORA36.2-201ENST00000384004 127 ntBASIC0.2□□□□□ -2.38
SOD1P00441 RNU6-842P-201ENST00000384269 107 ntBASIC0.2□□□□□ -2.38
SOD1P00441 RNU6-136P-201ENST00000384663 107 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms