Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.5□□□□□ -2.17
PHF1O43189 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.5□□□□□ -2.17
PHF1O43189 AC099677.2-201ENST00000436385 175 ntBASIC1.5□□□□□ -2.17
PHF1O43189 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
PHF1O43189 RNU7-95P-201ENST00000459222 64 ntBASIC1.5□□□□□ -2.17
PHF1O43189 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.5□□□□□ -2.17
PHF1O43189 RNU6-436P-201ENST00000516171 114 ntBASIC1.5□□□□□ -2.17
PHF1O43189 RNU6-250P-201ENST00000516958 103 ntBASIC1.5□□□□□ -2.17
PHF1O43189 RNU7-128P-201ENST00000517247 62 ntBASIC1.5□□□□□ -2.17
PHF1O43189 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.5□□□□□ -2.17
PHF1O43189 AP003733.2-201ENST00000529409 171 ntBASIC1.5□□□□□ -2.17
PHF1O43189 CBX3P4-201ENST00000538909 354 ntBASIC1.5□□□□□ -2.17
PHF1O43189 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.5□□□□□ -2.17
PHF1O43189 AL161670.1-201ENST00000554348 137 ntBASIC1.5□□□□□ -2.17
PHF1O43189 AC022254.1-201ENST00000567857 235 ntBASIC1.5□□□□□ -2.17
PHF1O43189 AL162730.1-201ENST00000605734 292 ntBASIC1.5□□□□□ -2.17
PHF1O43189 SNORD113-5-201ENST00000607261 78 ntBASIC1.5□□□□□ -2.17
PHF1O43189 AC011373.1-201ENST00000607270 237 ntBASIC1.5□□□□□ -2.17
PHF1O43189 MIR6734-201ENST00000621166 68 ntBASIC1.5□□□□□ -2.17
PHF1O43189 U6.108-201ENST00000637764 58 ntBASIC1.5□□□□□ -2.17
PHF1O43189 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PHF1O43189 Y_RNA.64-201ENST00000362845 102 ntBASIC1.49□□□□□ -2.17
PHF1O43189 Y_RNA.136-201ENST00000363444 102 ntBASIC1.49□□□□□ -2.17
PHF1O43189 SNORD113-8-201ENST00000363497 74 ntBASIC1.49□□□□□ -2.17
PHF1O43189 Y_RNA.191-201ENST00000363972 113 ntBASIC1.49□□□□□ -2.17
PHF1O43189 SNORA72.2-201ENST00000365028 127 ntBASIC1.49□□□□□ -2.17
PHF1O43189 RNU6-472P-201ENST00000384299 107 ntBASIC1.49□□□□□ -2.17
PHF1O43189 MIR597-201ENST00000384968 97 ntBASIC1.49□□□□□ -2.17
PHF1O43189 SNORA48.1-201ENST00000390879 135 ntBASIC1.49□□□□□ -2.17
PHF1O43189 MIR873-201ENST00000401120 77 ntBASIC1.49□□□□□ -2.17
PHF1O43189 AL031003.1-201ENST00000404229 172 ntBASIC1.49□□□□□ -2.17
PHF1O43189 AC004965.1-201ENST00000413033 213 ntBASIC1.49□□□□□ -2.17
PHF1O43189 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.49□□□□□ -2.17
PHF1O43189 CST2P1-201ENST00000425770 87 ntBASIC1.49□□□□□ -2.17
PHF1O43189 DYNLT3P2-201ENST00000442517 295 ntBASIC1.49□□□□□ -2.17
PHF1O43189 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.49□□□□□ -2.17
PHF1O43189 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.49□□□□□ -2.17
PHF1O43189 SEPT14P8-201ENST00000508026 178 ntBASIC1.49□□□□□ -2.17
PHF1O43189 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.49□□□□□ -2.17
PHF1O43189 RNU6-1146P-201ENST00000516282 102 ntBASIC1.49□□□□□ -2.17
PHF1O43189 RNU6-635P-201ENST00000516651 102 ntBASIC1.49□□□□□ -2.17
PHF1O43189 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.49□□□□□ -2.17
PHF1O43189 MIR4713-201ENST00000582691 75 ntBASIC1.49□□□□□ -2.17
PHF1O43189 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.49□□□□□ -2.17
PHF1O43189 MIR8062-201ENST00000621515 85 ntBASIC1.49□□□□□ -2.17
PHF1O43189 AC006001.4-201ENST00000622243 395 ntBASIC1.49□□□□□ -2.17
PHF1O43189 Y_RNA.47-201ENST00000362697 108 ntBASIC1.48□□□□□ -2.17
PHF1O43189 RNU4-90P-201ENST00000362773 141 ntBASIC1.48□□□□□ -2.17
PHF1O43189 RNU6-1266P-201ENST00000362794 105 ntBASIC1.48□□□□□ -2.17
PHF1O43189 Y_RNA.84-201ENST00000363011 104 ntBASIC1.48□□□□□ -2.17
PHF1O43189 SNORD115-3-201ENST00000363100 82 ntBASIC1.48□□□□□ -2.17
PHF1O43189 Y_RNA.331-201ENST00000365267 102 ntBASIC1.48□□□□□ -2.17
PHF1O43189 RNU6-117P-201ENST00000365415 107 ntBASIC1.48□□□□□ -2.17
PHF1O43189 MIR215-201ENST00000384858 110 ntBASIC1.48□□□□□ -2.17
PHF1O43189 MIR515-2-201ENST00000384883 83 ntBASIC1.48□□□□□ -2.17
PHF1O43189 MIR515-1-201ENST00000384884 83 ntBASIC1.48□□□□□ -2.17
PHF1O43189 RNU4-30P-201ENST00000410245 143 ntBASIC1.48□□□□□ -2.17
PHF1O43189 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.48□□□□□ -2.17
PHF1O43189 MRPS10P1-201ENST00000448483 130 ntBASIC1.48□□□□□ -2.17
PHF1O43189 RPS26P45-201ENST00000471748 340 ntBASIC1.48□□□□□ -2.17
PHF1O43189 AC098869.1-201ENST00000481627 292 ntBASIC1.48□□□□□ -2.17
PHF1O43189 RNU6-1041P-201ENST00000516254 102 ntBASIC1.48□□□□□ -2.17
PHF1O43189 RNY3P15-201ENST00000516297 97 ntBASIC1.48□□□□□ -2.17
PHF1O43189 RNA5SP220-201ENST00000516298 104 ntBASIC1.48□□□□□ -2.17
PHF1O43189 RNU6-155P-201ENST00000516347 100 ntBASIC1.48□□□□□ -2.17
PHF1O43189 RNU7-110P-201ENST00000516891 62 ntBASIC1.48□□□□□ -2.17
PHF1O43189 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.48□□□□□ -2.17
PHF1O43189 AC006380.1-201ENST00000603598 186 ntBASIC1.48□□□□□ -2.17
PHF1O43189 MIR502-201ENST00000606349 86 ntBASIC1.48□□□□□ -2.17
PHF1O43189 U6.73-201ENST00000619194 103 ntBASIC1.48□□□□□ -2.17
PHF1O43189 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.48□□□□□ -2.17
PHF1O43189 Y_RNA.124-201ENST00000363339 93 ntBASIC1.47□□□□□ -2.17
PHF1O43189 Y_RNA.149-201ENST00000363558 117 ntBASIC1.47□□□□□ -2.17
PHF1O43189 Y_RNA.176-201ENST00000363815 109 ntBASIC1.47□□□□□ -2.17
PHF1O43189 RNU6-271P-201ENST00000363858 105 ntBASIC1.47□□□□□ -2.17
PHF1O43189 RNU6-392P-201ENST00000364926 101 ntBASIC1.47□□□□□ -2.17
PHF1O43189 RNU6-290P-201ENST00000365212 101 ntBASIC1.47□□□□□ -2.17
PHF1O43189 Y_RNA.418-201ENST00000384029 102 ntBASIC1.47□□□□□ -2.17
PHF1O43189 Y_RNA.512-201ENST00000384518 102 ntBASIC1.47□□□□□ -2.17
PHF1O43189 Y_RNA.541-201ENST00000384640 113 ntBASIC1.47□□□□□ -2.17
PHF1O43189 RNU11-3P-201ENST00000391111 133 ntBASIC1.47□□□□□ -2.17
PHF1O43189 RNU6-1203P-201ENST00000410703 110 ntBASIC1.47□□□□□ -2.17
PHF1O43189 HSPE1P13-201ENST00000451143 297 ntBASIC1.47□□□□□ -2.17
PHF1O43189 AC009474.2-201ENST00000451383 136 ntBASIC1.47□□□□□ -2.17
PHF1O43189 RPS26P55-201ENST00000471178 356 ntBASIC1.47□□□□□ -2.17
PHF1O43189 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.47□□□□□ -2.17
PHF1O43189 AC107393.1-201ENST00000512403 346 ntBASIC1.47□□□□□ -2.17
PHF1O43189 AC024995.1-201ENST00000523014 93 ntBASIC1.47□□□□□ -2.17
PHF1O43189 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.47□□□□□ -2.17
PHF1O43189 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.47□□□□□ -2.17
PHF1O43189 AC008269.2-201ENST00000561915 1105 ntBASIC1.47□□□□□ -2.17
PHF1O43189 SUB1P4-201ENST00000566062 339 ntBASIC1.47□□□□□ -2.17
PHF1O43189 MIR4452-201ENST00000583004 71 ntBASIC1.47□□□□□ -2.17
PHF1O43189 AC103810.8-201ENST00000607347 118 ntBASIC1.47□□□□□ -2.17
PHF1O43189 AP001282.2-201ENST00000616149 309 ntBASIC1.47□□□□□ -2.17
PHF1O43189 RNU6-862P-201ENST00000362804 105 ntBASIC1.46□□□□□ -2.18
PHF1O43189 RNU1-22P-201ENST00000363334 158 ntBASIC1.46□□□□□ -2.18
PHF1O43189 SNORA33-201ENST00000363664 130 ntBASIC1.46□□□□□ -2.18
PHF1O43189 SNORD48-201ENST00000364953 64 ntBASIC1.46□□□□□ -2.18
PHF1O43189 Y_RNA.376-201ENST00000365638 108 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms