Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC005828.6-201ENST00000606610 232 ntBASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 AL627230.6-201ENST00000611129 280 ntBASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 AL159152.1-201ENST00000635019 2587 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 SNORA25.1-201ENST00000362326 128 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-1266P-201ENST00000362794 105 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.136-201ENST00000363444 102 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-1164P-201ENST00000364428 107 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.277-201ENST00000364754 102 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 SNORD48-201ENST00000364953 64 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-1240P-201ENST00000365155 104 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 UBL5P3-201ENST00000475112 231 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 AC091959.1-201ENST00000495857 238 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 AC026271.5-201ENST00000577873 130 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 AL031274.2-201ENST00000599419 203 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 AL096840.1-201ENST00000603287 93 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 AC037487.3-201ENST00000606668 112 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 AC009487.4-201ENST00000624969 3585 ntBASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-407P-201ENST00000365280 104 ntBASIC1.94□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-662P-201ENST00000384253 104 ntBASIC1.94□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-160P-201ENST00000384591 107 ntBASIC1.94□□□□□ -2.1
SMARCAL1Q9NZC9 MT-TG-201ENST00000387429 68 ntBASIC1.94□□□□□ -2.1
SMARCAL1Q9NZC9 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-651P-201ENST00000411040 105 ntBASIC1.94□□□□□ -2.1
SMARCAL1Q9NZC9 AC008134.1-201ENST00000420943 193 ntBASIC1.94□□□□□ -2.1
SMARCAL1Q9NZC9 RPS29P11-201ENST00000496507 171 ntBASIC1.94□□□□□ -2.1
SMARCAL1Q9NZC9 AC010598.1-201ENST00000510378 103 ntBASIC1.94□□□□□ -2.1
SMARCAL1Q9NZC9 MRPS17P9-201ENST00000511924 393 ntBASIC1.94□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-1041P-201ENST00000516254 102 ntBASIC1.94□□□□□ -2.1
SMARCAL1Q9NZC9 MIR4419B-201ENST00000577260 68 ntBASIC1.94□□□□□ -2.1
SMARCAL1Q9NZC9 MIR4643-201ENST00000577473 78 ntBASIC1.94□□□□□ -2.1
SMARCAL1Q9NZC9 SNORA27.1-201ENST00000362604 124 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.44-201ENST00000362676 108 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.117-201ENST00000363294 101 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.172-201ENST00000363765 102 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 RNA5SP493-201ENST00000364115 91 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.352-201ENST00000365439 102 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.361-201ENST00000365515 120 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.416-201ENST00000384014 113 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-514P-201ENST00000384208 107 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.476-201ENST00000384347 108 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 AL512604.1-201ENST00000404812 257 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 RNU2-61P-201ENST00000411069 191 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 AL135790.2-201ENST00000437701 267 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 AC011406.1-201ENST00000512440 370 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-1023P-201ENST00000516137 106 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 RNU1-41P-201ENST00000516161 162 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-191P-201ENST00000516295 94 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 RNU1-48P-201ENST00000516400 162 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-388P-201ENST00000517012 105 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-389P-201ENST00000517048 105 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 AL512605.2-201ENST00000592972 256 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 AC090425.1-201ENST00000610007 140 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 U2.14-201ENST00000615943 113 ntBASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-740P-201ENST00000364734 105 ntBASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 SNORA20.1-201ENST00000364790 130 ntBASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.287-201ENST00000364853 94 ntBASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.489-201ENST00000384410 101 ntBASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.539-201ENST00000384635 107 ntBASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-417P-201ENST00000384712 107 ntBASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 MIR1253-201ENST00000408273 105 ntBASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 MIR548H3-201ENST00000408771 118 ntBASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 BX510359.4-201ENST00000423750 193 ntBASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 HMGN2P34-201ENST00000437647 269 ntBASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 SNORA27.4-201ENST00000516650 95 ntBASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 AC005357.1-201ENST00000588399 301 ntBASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 AC078938.1-201ENST00000620993 318 ntBASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
SMARCAL1Q9NZC9 AC092881.1-201ENST00000638218 2733 ntBASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.65-201ENST00000362846 100 ntBASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 RNA5SP363-201ENST00000365072 115 ntBASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 MIR873-201ENST00000401120 77 ntBASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 RPS27P22-201ENST00000478056 241 ntBASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 RNA5SP20-201ENST00000515976 84 ntBASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-111P-201ENST00000517179 105 ntBASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 MIR3169-201ENST00000578032 83 ntBASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 MIR3684-201ENST00000579779 74 ntBASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 AP006437.1-201ENST00000641440 3685 ntBASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 AC008555.8-201ENST00000623602 2168 ntBASIC1.91□□□□□ -2.1
SMARCAL1Q9NZC9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.20-201ENST00000362479 113 ntBASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-23P-201ENST00000363283 107 ntBASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.275-201ENST00000364726 110 ntBASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-338P-201ENST00000383888 105 ntBASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-855P-201ENST00000410395 104 ntBASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 AC245102.2-201ENST00000448956 180 ntBASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 RNU1-131P-201ENST00000458943 161 ntBASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 AC010409.1-201ENST00000487382 476 ntBASIC1.9□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-1337P-201ENST00000516525 95 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 210.5 ms