Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SNORD99-201ENST00000408612 74 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 RNA5SP475-201ENST00000410568 110 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 MTATP6P17-201ENST00000431030 672 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 AC114811.1-201ENST00000507207 168 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 RNU6-63P-201ENST00000516690 95 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 AC109810.1-201ENST00000534066 224 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 AC018448.1-201ENST00000552843 316 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 MIR6504-201ENST00000613520 61 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 MIR8070-201ENST00000616510 88 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 SEPT14P17-201ENST00000617978 177 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 AC024614.3-201ENST00000637860 256 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 Y_RNA.51-201ENST00000362725 102 ntBASIC0.59□□□□□ -2.31
LRRC40Q9H9A6 SNORA25.3-201ENST00000363205 127 ntBASIC0.59□□□□□ -2.31
LRRC40Q9H9A6 RNU6-879P-201ENST00000364328 108 ntBASIC0.59□□□□□ -2.31
LRRC40Q9H9A6 MIR190B-201ENST00000401119 79 ntBASIC0.59□□□□□ -2.31
LRRC40Q9H9A6 Y_RNA.621-201ENST00000411065 96 ntBASIC0.59□□□□□ -2.31
LRRC40Q9H9A6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.59□□□□□ -2.31
LRRC40Q9H9A6 RPL23AP50-201ENST00000434149 455 ntBASIC0.59□□□□□ -2.31
LRRC40Q9H9A6 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.59□□□□□ -2.31
LRRC40Q9H9A6 RNU7-87P-201ENST00000459343 62 ntBASIC0.59□□□□□ -2.31
LRRC40Q9H9A6 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
LRRC40Q9H9A6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.59□□□□□ -2.31
LRRC40Q9H9A6 MIR6128-201ENST00000615528 109 ntBASIC0.59□□□□□ -2.31
LRRC40Q9H9A6 7SK.10-201ENST00000621414 298 ntBASIC0.59□□□□□ -2.31
LRRC40Q9H9A6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
LRRC40Q9H9A6 RNU6-842P-201ENST00000384269 107 ntBASIC0.58□□□□□ -2.32
LRRC40Q9H9A6 RNU6-1105P-201ENST00000384774 107 ntBASIC0.58□□□□□ -2.32
LRRC40Q9H9A6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
LRRC40Q9H9A6 MIR1298-201ENST00000408783 112 ntBASIC0.58□□□□□ -2.32
LRRC40Q9H9A6 RNU2-16P-201ENST00000410712 136 ntBASIC0.58□□□□□ -2.32
LRRC40Q9H9A6 RNU6-373P-201ENST00000411247 98 ntBASIC0.58□□□□□ -2.32
LRRC40Q9H9A6 SUMO1P2-201ENST00000452524 304 ntBASIC0.58□□□□□ -2.32
LRRC40Q9H9A6 AC098869.1-201ENST00000481627 292 ntBASIC0.58□□□□□ -2.32
LRRC40Q9H9A6 RNU6-864P-201ENST00000516256 108 ntBASIC0.58□□□□□ -2.32
LRRC40Q9H9A6 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
LRRC40Q9H9A6 AC023442.1-201ENST00000531247 422 ntBASIC0.58□□□□□ -2.32
LRRC40Q9H9A6 AC090617.10-201ENST00000624308 134 ntBASIC0.58□□□□□ -2.32
LRRC40Q9H9A6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
LRRC40Q9H9A6 MIR410-201ENST00000362222 80 ntBASIC0.57□□□□□ -2.32
LRRC40Q9H9A6 Y_RNA.4-201ENST00000362333 112 ntBASIC0.57□□□□□ -2.32
LRRC40Q9H9A6 Y_RNA.364-201ENST00000365532 101 ntBASIC0.57□□□□□ -2.32
LRRC40Q9H9A6 MIR520C-201ENST00000385005 87 ntBASIC0.57□□□□□ -2.32
LRRC40Q9H9A6 RPS29P1-201ENST00000465274 159 ntBASIC0.57□□□□□ -2.32
LRRC40Q9H9A6 RNU6-314P-201ENST00000516574 104 ntBASIC0.57□□□□□ -2.32
LRRC40Q9H9A6 RNU6-1088P-201ENST00000516850 104 ntBASIC0.57□□□□□ -2.32
LRRC40Q9H9A6 AC026407.1-201ENST00000518369 204 ntBASIC0.57□□□□□ -2.32
LRRC40Q9H9A6 AP003716.2-201ENST00000528260 108 ntBASIC0.57□□□□□ -2.32
LRRC40Q9H9A6 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.57□□□□□ -2.32
LRRC40Q9H9A6 AC005828.6-201ENST00000606610 232 ntBASIC0.57□□□□□ -2.32
LRRC40Q9H9A6 MIR3674-201ENST00000636576 68 ntBASIC0.57□□□□□ -2.32
LRRC40Q9H9A6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
LRRC40Q9H9A6 Y_RNA.191-201ENST00000363972 113 ntBASIC0.56□□□□□ -2.32
LRRC40Q9H9A6 RNU6-1090P-201ENST00000364065 94 ntBASIC0.56□□□□□ -2.32
LRRC40Q9H9A6 RNU6-454P-201ENST00000364292 107 ntBASIC0.56□□□□□ -2.32
LRRC40Q9H9A6 RNU6-1013P-201ENST00000384180 107 ntBASIC0.56□□□□□ -2.32
LRRC40Q9H9A6 SNORD116-1-201ENST00000384335 95 ntBASIC0.56□□□□□ -2.32
LRRC40Q9H9A6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.56□□□□□ -2.32
LRRC40Q9H9A6 DLGAP5P1-201ENST00000430307 464 ntBASIC0.56□□□□□ -2.32
LRRC40Q9H9A6 MTND4LP16-201ENST00000440828 295 ntBASIC0.56□□□□□ -2.32
LRRC40Q9H9A6 UBE2V1P7-201ENST00000446395 340 ntBASIC0.56□□□□□ -2.32
LRRC40Q9H9A6 RNU6-625P-201ENST00000459412 107 ntBASIC0.56□□□□□ -2.32
LRRC40Q9H9A6 AP003484.1-201ENST00000530974 250 ntBASIC0.56□□□□□ -2.32
LRRC40Q9H9A6 AC022079.1-201ENST00000621546 602 ntBASIC0.56□□□□□ -2.32
LRRC40Q9H9A6 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 RNU6-1297P-201ENST00000384415 104 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 Y_RNA.557-201ENST00000384680 107 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 MIR516B2-201ENST00000385190 85 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 RNU6-700P-201ENST00000391043 107 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 MIR1185-1-201ENST00000408598 86 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 RNA5SP511-201ENST00000410487 115 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 AL354751.2-201ENST00000415471 210 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 ELOCP24-201ENST00000456370 334 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 AC067940.1-201ENST00000458411 300 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 SNORD5.1-201ENST00000458800 75 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 RNU7-41P-201ENST00000515917 61 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 RNU6-1110P-201ENST00000516462 101 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 SNORA74.3-201ENST00000517108 154 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 RNU6-1314P-201ENST00000517139 104 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 MIR5701-3-201ENST00000578890 82 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 MIR4714-201ENST00000580728 77 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 MIR5701-1-201ENST00000585138 82 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 MIR5701-2-201ENST00000615634 82 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 MIR3662-201ENST00000637030 95 ntBASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.55□□□□□ -2.32
LRRC40Q9H9A6 AC068700.1-201ENST00000565862 3754 ntBASIC0.54□□□□□ -2.32
LRRC40Q9H9A6 SNORA25.9-201ENST00000365087 128 ntBASIC0.54□□□□□ -2.32
LRRC40Q9H9A6 MIR136-201ENST00000385207 82 ntBASIC0.54□□□□□ -2.32
LRRC40Q9H9A6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.54□□□□□ -2.32
LRRC40Q9H9A6 AC009161.1-201ENST00000417306 376 ntBASIC0.54□□□□□ -2.32
LRRC40Q9H9A6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.54□□□□□ -2.32
LRRC40Q9H9A6 RNU6-566P-201ENST00000516790 107 ntBASIC0.54□□□□□ -2.32
LRRC40Q9H9A6 MTND4LP26-201ENST00000518144 282 ntBASIC0.54□□□□□ -2.32
LRRC40Q9H9A6 AC109635.3-201ENST00000529536 185 ntBASIC0.54□□□□□ -2.32
LRRC40Q9H9A6 MIR4452-201ENST00000583004 71 ntBASIC0.54□□□□□ -2.32
LRRC40Q9H9A6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.54□□□□□ -2.32
LRRC40Q9H9A6 AL591926.4-201ENST00000616895 298 ntBASIC0.54□□□□□ -2.32
LRRC40Q9H9A6 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms