Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC022217.4-201ENST00000604389 163 ntBASIC1.77□□□□□ -2.13
PCGF1Q9BSM1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.77□□□□□ -2.13
PCGF1Q9BSM1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PCGF1Q9BSM1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
PCGF1Q9BSM1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
PCGF1Q9BSM1 Y_RNA.64-201ENST00000362845 102 ntBASIC1.76□□□□□ -2.13
PCGF1Q9BSM1 SNORA67.3-201ENST00000384366 140 ntBASIC1.76□□□□□ -2.13
PCGF1Q9BSM1 Y_RNA.581-201ENST00000391017 97 ntBASIC1.76□□□□□ -2.13
PCGF1Q9BSM1 HSPE1P13-201ENST00000451143 297 ntBASIC1.76□□□□□ -2.13
PCGF1Q9BSM1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.76□□□□□ -2.13
PCGF1Q9BSM1 RNU6-63P-201ENST00000516690 95 ntBASIC1.76□□□□□ -2.13
PCGF1Q9BSM1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.76□□□□□ -2.13
PCGF1Q9BSM1 AC008737.2-201ENST00000599446 118 ntBASIC1.76□□□□□ -2.13
PCGF1Q9BSM1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.76□□□□□ -2.13
PCGF1Q9BSM1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.76□□□□□ -2.13
PCGF1Q9BSM1 AC018630.2-201ENST00000534866 2403 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 snoU2_19.2-201ENST00000363024 80 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 Y_RNA.222-201ENST00000364264 102 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 SNORA4.2-201ENST00000365313 147 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 Y_RNA.383-201ENST00000383855 97 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 RNU6-1109P-201ENST00000391187 107 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 MIR548F4-201ENST00000408515 105 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 RNU2-7P-201ENST00000410794 178 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 HSPE1P9-201ENST00000440046 311 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 AL731563.1-201ENST00000442202 214 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 RNU6-1143P-201ENST00000516125 104 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 RNU6-1278P-201ENST00000516130 107 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 RNU1-40P-201ENST00000516816 164 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 RNU1-97P-201ENST00000516872 164 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 MIR3145-201ENST00000580727 82 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 MIR6079-201ENST00000635807 62 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 MIR219B-201ENST00000637023 88 ntBASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
PCGF1Q9BSM1 SNORD116-13-201ENST00000384408 92 ntBASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 RNU6-376P-201ENST00000384731 106 ntBASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 MIR215-201ENST00000384858 110 ntBASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 AL023284.1-201ENST00000403956 276 ntBASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 RPL31P63-201ENST00000422565 375 ntBASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 AC010154.1-201ENST00000425857 269 ntBASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 POLR2KP2-201ENST00000438155 177 ntBASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 MTND5P22-201ENST00000458380 195 ntBASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 RPL23AP42-201ENST00000471152 471 ntBASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 AP003733.2-201ENST00000529409 171 ntBASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 AC091178.2-201ENST00000584401 117 ntBASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 AC103810.8-201ENST00000607347 118 ntBASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
PCGF1Q9BSM1 RNU4-90P-201ENST00000362773 141 ntBASIC1.73□□□□□ -2.13
PCGF1Q9BSM1 RNU6-439P-201ENST00000384188 106 ntBASIC1.73□□□□□ -2.13
PCGF1Q9BSM1 MTND2P23-201ENST00000422990 651 ntBASIC1.73□□□□□ -2.13
PCGF1Q9BSM1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.73□□□□□ -2.13
PCGF1Q9BSM1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.73□□□□□ -2.13
PCGF1Q9BSM1 AL021397.1-201ENST00000451806 248 ntBASIC1.73□□□□□ -2.13
PCGF1Q9BSM1 snoU13.15-201ENST00000459407 104 ntBASIC1.73□□□□□ -2.13
PCGF1Q9BSM1 AC091021.1-201ENST00000468051 388 ntBASIC1.73□□□□□ -2.13
PCGF1Q9BSM1 RNU6-327P-201ENST00000516270 127 ntBASIC1.73□□□□□ -2.13
PCGF1Q9BSM1 RNA5SP481-201ENST00000516814 122 ntBASIC1.73□□□□□ -2.13
PCGF1Q9BSM1 RPL21P9-201ENST00000556149 474 ntBASIC1.73□□□□□ -2.13
PCGF1Q9BSM1 MIR3935-201ENST00000583472 104 ntBASIC1.73□□□□□ -2.13
PCGF1Q9BSM1 AC136443.5-201ENST00000603741 370 ntBASIC1.73□□□□□ -2.13
PCGF1Q9BSM1 Y_RNA.162-201ENST00000363683 102 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 Y_RNA.418-201ENST00000384029 102 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 Y_RNA.512-201ENST00000384518 102 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 Y_RNA.541-201ENST00000384640 113 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 RNU6-136P-201ENST00000384663 107 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 RNU6-710P-201ENST00000410424 105 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 RNA5SP511-201ENST00000410487 115 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 AC245047.3-201ENST00000429428 127 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 RNU7-94P-201ENST00000459576 63 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 AC025033.1-201ENST00000463883 194 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 HMGN1P10-201ENST00000474557 553 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 SNORA31.10-201ENST00000516482 106 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 RNU6-635P-201ENST00000516651 102 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 AL117187.1-201ENST00000555482 181 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 AC015720.1-201ENST00000565251 277 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 AC004832.4-201ENST00000608952 331 ntBASIC1.72□□□□□ -2.13
PCGF1Q9BSM1 SNORD114-1-201ENST00000362705 72 ntBASIC1.71□□□□□ -2.14
PCGF1Q9BSM1 RNU4-80P-201ENST00000363200 141 ntBASIC1.71□□□□□ -2.14
PCGF1Q9BSM1 RNA5SP160-201ENST00000364866 120 ntBASIC1.71□□□□□ -2.14
PCGF1Q9BSM1 RNU6-290P-201ENST00000365212 101 ntBASIC1.71□□□□□ -2.14
PCGF1Q9BSM1 Y_RNA.459-201ENST00000384251 102 ntBASIC1.71□□□□□ -2.14
PCGF1Q9BSM1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PCGF1Q9BSM1 RNU11-5P-201ENST00000391216 129 ntBASIC1.71□□□□□ -2.14
PCGF1Q9BSM1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.71□□□□□ -2.14
PCGF1Q9BSM1 RNU6-855P-201ENST00000410395 104 ntBASIC1.71□□□□□ -2.14
PCGF1Q9BSM1 AL162725.1-201ENST00000435405 301 ntBASIC1.71□□□□□ -2.14
PCGF1Q9BSM1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PCGF1Q9BSM1 AL135790.2-201ENST00000437701 267 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 158.5 ms