Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RN7SL20P-201ENST00000488827 297 ntBASIC2.84□□□□□ -1.95
PTCHD1Q96NR3 AC018868.1-201ENST00000491307 315 ntBASIC2.84□□□□□ -1.95
PTCHD1Q96NR3 RNU6-1333P-201ENST00000516162 93 ntBASIC2.84□□□□□ -1.95
PTCHD1Q96NR3 RNU6-1234P-201ENST00000516877 103 ntBASIC2.84□□□□□ -1.95
PTCHD1Q96NR3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.84□□□□□ -1.95
PTCHD1Q96NR3 AP001328.1-201ENST00000528550 176 ntBASIC2.84□□□□□ -1.95
PTCHD1Q96NR3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.84□□□□□ -1.95
PTCHD1Q96NR3 AL160236.1-201ENST00000556317 195 ntBASIC2.84□□□□□ -1.95
PTCHD1Q96NR3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.84□□□□□ -1.95
PTCHD1Q96NR3 AC011603.4-201ENST00000611325 277 ntBASIC2.84□□□□□ -1.95
PTCHD1Q96NR3 uc_338.4-201ENST00000616635 176 ntBASIC2.84□□□□□ -1.95
PTCHD1Q96NR3 AP001340.1-201ENST00000624405 217 ntBASIC2.84□□□□□ -1.95
PTCHD1Q96NR3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PTCHD1Q96NR3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.84□□□□□ -1.96
PTCHD1Q96NR3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
PTCHD1Q96NR3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
PTCHD1Q96NR3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 RNU6-1209P-201ENST00000363655 107 ntBASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 RNY1P11-201ENST00000363759 113 ntBASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 Y_RNA.796-201ENST00000364268 102 ntBASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 Y_RNA.251-201ENST00000364551 99 ntBASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 Y_RNA.799-201ENST00000364992 102 ntBASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 SNORA46-201ENST00000384762 135 ntBASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 NDUFB4P4-201ENST00000404822 243 ntBASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 RNA5SP274-201ENST00000410484 108 ntBASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 Y_RNA.629-201ENST00000411368 105 ntBASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 AC011406.1-201ENST00000512440 370 ntBASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 RNU2-56P-201ENST00000516826 190 ntBASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 RNU6-56P-201ENST00000516986 93 ntBASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 AC090142.3-201ENST00000519012 385 ntBASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PTCHD1Q96NR3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 snoU2-30.2-201ENST00000362805 70 ntBASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 RNU1-96P-201ENST00000364163 162 ntBASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 RNA5SP125-201ENST00000364843 120 ntBASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 MIR520G-201ENST00000385064 90 ntBASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 RNU6-1186P-201ENST00000410429 97 ntBASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 AC245047.4-201ENST00000433189 144 ntBASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 SNORD11-201ENST00000459124 84 ntBASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 AC091826.1-201ENST00000514065 313 ntBASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 SNORD77.4-201ENST00000516158 81 ntBASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 AC073413.2-201ENST00000604332 360 ntBASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 AC007318.2-201ENST00000620999 243 ntBASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PTCHD1Q96NR3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 Y_RNA.111-201ENST00000363248 100 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 SNORD56.5-201ENST00000364281 72 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 RNU6-978P-201ENST00000364371 103 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 SNORA25.7-201ENST00000364375 127 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 SNORA25B-201ENST00000365507 128 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 RNU6-80P-201ENST00000384195 107 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 RPL21P3-201ENST00000395517 478 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 RNU2-70P-201ENST00000410718 179 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 UBBP3-201ENST00000445497 241 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 UQCRHP3-201ENST00000451503 251 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 RN7SL75P-201ENST00000461926 281 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 RNA5SP153-201ENST00000516498 76 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 AC007229.1-201ENST00000590455 412 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 AL359881.1-201ENST00000602916 267 ntBASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.81□□□□□ -1.96
PTCHD1Q96NR3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 AC073325.2-201ENST00000339545 159 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 RNU6-1336P-201ENST00000383886 109 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 Y_RNA.621-201ENST00000411065 96 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 SRIP3-201ENST00000413200 219 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 RPS15AP28-201ENST00000435088 386 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 SCGB1D5P-201ENST00000515134 247 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 RNU4-57P-201ENST00000515980 135 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 RNU7-99P-201ENST00000516271 62 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 U7.2-201ENST00000607576 63 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 JPX_2.1-201ENST00000614161 69 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 AL449363.1-201ENST00000617815 186 ntBASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
PTCHD1Q96NR3 AL365361.1-201ENST00000566942 3481 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms