Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 AL137100.2-201ENST00000555786 315 ntBASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTCAP3Q53RY4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRTCAP3Q53RY4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
KRTCAP3Q53RY4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.149-201ENST00000363558 117 ntBASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-21P-201ENST00000384710 107 ntBASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 MIR515-2-201ENST00000384883 83 ntBASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 MIR515-1-201ENST00000384884 83 ntBASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 AL355796.1-201ENST00000406706 323 ntBASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 RNU4-30P-201ENST00000410245 143 ntBASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-1199P-201ENST00000411249 104 ntBASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 RPL23AP36-201ENST00000413895 458 ntBASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 AC104435.1-201ENST00000483483 166 ntBASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-1143P-201ENST00000516125 104 ntBASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 MIR5094-201ENST00000578766 85 ntBASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 AC069114.2-201ENST00000604699 304 ntBASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 AC005828.6-201ENST00000606610 232 ntBASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTCAP3Q53RY4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 SNORD81.1-201ENST00000363064 77 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 SNORD113-8-201ENST00000363497 74 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-271P-201ENST00000363858 105 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-324P-201ENST00000363957 106 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 RNA5SP99-201ENST00000364020 114 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 SNORD115-30-201ENST00000364117 82 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.286-201ENST00000364813 102 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.331-201ENST00000365267 102 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.376-201ENST00000365638 108 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-102P-201ENST00000384485 104 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 RNU2-2P-201ENST00000410396 191 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.602-201ENST00000410535 92 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 RNA5SP100-201ENST00000410903 110 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 RNA5SP59-201ENST00000410922 110 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 RPS27P22-201ENST00000478056 241 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-496P-201ENST00000516145 99 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 MIR4503-201ENST00000582187 83 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 MIR8062-201ENST00000621515 85 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.82□□□□□ -2.12
KRTCAP3Q53RY4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 SNORA27.1-201ENST00000362604 124 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.84-201ENST00000363011 104 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.144-201ENST00000363521 113 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-407P-201ENST00000365280 104 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-463P-201ENST00000384340 107 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 MT-TW-201ENST00000387382 68 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 RNA5SP323-201ENST00000391094 133 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 MIR873-201ENST00000401120 77 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 MRPS10P1-201ENST00000448483 130 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 SEPT14P8-201ENST00000508026 178 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 RNA5SP458-201ENST00000516188 119 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-570P-201ENST00000517051 105 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 CBX3P4-201ENST00000538909 354 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 AC023157.2-201ENST00000540596 141 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 AL161670.1-201ENST00000554348 137 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 MIR4285-201ENST00000581001 85 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 MIR4438-201ENST00000585271 93 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 SNORD113-5-201ENST00000607261 78 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.783-201ENST00000613546 102 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 U6.73-201ENST00000619194 103 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 AP000553.5-201ENST00000641933 54 ntBASIC1.81□□□□□ -2.12
KRTCAP3Q53RY4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 SNORD114-7-201ENST00000362520 77 ntBASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.396-201ENST00000383949 103 ntBASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-472P-201ENST00000384299 107 ntBASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.541-201ENST00000384640 113 ntBASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 RNA5SP467-201ENST00000391274 118 ntBASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 AL031003.1-201ENST00000404229 172 ntBASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 AL603825.1-201ENST00000438481 80 ntBASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 HSPE1P25-201ENST00000455484 251 ntBASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 RNA5SP20-201ENST00000515976 84 ntBASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 SNORA70.12-201ENST00000516084 153 ntBASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 AC024995.1-201ENST00000523014 93 ntBASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 AL359075.3-201ENST00000613288 217 ntBASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 MIR8074-201ENST00000615081 81 ntBASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.8□□□□□ -2.12
KRTCAP3Q53RY4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
KRTCAP3Q53RY4 SNORA33-201ENST00000363664 130 ntBASIC1.79□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-1019P-201ENST00000364424 107 ntBASIC1.79□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.361-201ENST00000365515 120 ntBASIC1.79□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-196P-201ENST00000384315 107 ntBASIC1.79□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.483-201ENST00000384380 101 ntBASIC1.79□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.581-201ENST00000391017 97 ntBASIC1.79□□□□□ -2.12
KRTCAP3Q53RY4 RNU6-1186P-201ENST00000410429 97 ntBASIC1.79□□□□□ -2.12
KRTCAP3Q53RY4 RNU1-142P-201ENST00000516682 145 ntBASIC1.79□□□□□ -2.12
KRTCAP3Q53RY4 7SK.10-201ENST00000621414 298 ntBASIC1.79□□□□□ -2.12
KRTCAP3Q53RY4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 MIR424-201ENST00000362227 98 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 MIR126-201ENST00000362291 85 ntBASIC1.78□□□□□ -2.12
KRTCAP3Q53RY4 Y_RNA.16-201ENST00000362421 102 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms