Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 MIR3684-201ENST00000579779 74 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 MIR4645-201ENST00000583158 77 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 AC092447.9-201ENST00000603395 144 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 AC069431.2-201ENST00000604149 1099 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 AC006566.1-201ENST00000608943 513 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 uc_338.6-201ENST00000613544 171 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 U6.90-201ENST00000614007 104 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 U6.70-201ENST00000620287 104 ntBASIC-0.62□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-364P-201ENST00000384387 107 ntBASIC-0.63□□□□□ -2.51
TRAV13-1A0A0B4J241 MTCO2P33-201ENST00000402100 465 ntBASIC-0.63□□□□□ -2.51
TRAV13-1A0A0B4J241 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.63□□□□□ -2.51
TRAV13-1A0A0B4J241 IGLVI-20-201ENST00000519296 130 ntBASIC-0.63□□□□□ -2.51
TRAV13-1A0A0B4J241 AL137161.1-201ENST00000532231 390 ntBASIC-0.63□□□□□ -2.51
TRAV13-1A0A0B4J241 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.63□□□□□ -2.51
TRAV13-1A0A0B4J241 AC100830.2-201ENST00000581636 240 ntBASIC-0.63□□□□□ -2.51
TRAV13-1A0A0B4J241 MIR4999-201ENST00000585029 91 ntBASIC-0.63□□□□□ -2.51
TRAV13-1A0A0B4J241 AL138960.2-201ENST00000625145 535 ntBASIC-0.63□□□□□ -2.51
TRAV13-1A0A0B4J241 MIR499B-201ENST00000636498 73 ntBASIC-0.63□□□□□ -2.51
TRAV13-1A0A0B4J241 SNORD115-32-201ENST00000364079 82 ntBASIC-0.64□□□□□ -2.51
TRAV13-1A0A0B4J241 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.64□□□□□ -2.51
TRAV13-1A0A0B4J241 MTCYBP4-201ENST00000401524 249 ntBASIC-0.64□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU2-29P-201ENST00000410423 189 ntBASIC-0.64□□□□□ -2.51
TRAV13-1A0A0B4J241 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.64□□□□□ -2.51
TRAV13-1A0A0B4J241 MTND4P32-201ENST00000437189 1237 ntBASIC-0.64□□□□□ -2.51
TRAV13-1A0A0B4J241 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.64□□□□□ -2.51
TRAV13-1A0A0B4J241 AC093303.1-201ENST00000514549 295 ntBASIC-0.64□□□□□ -2.51
TRAV13-1A0A0B4J241 SNORA14.1-201ENST00000516113 141 ntBASIC-0.64□□□□□ -2.51
TRAV13-1A0A0B4J241 SNORD45.4-201ENST00000516629 73 ntBASIC-0.64□□□□□ -2.51
TRAV13-1A0A0B4J241 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.64□□□□□ -2.51
TRAV13-1A0A0B4J241 AL158209.2-201ENST00000619266 216 ntBASIC-0.64□□□□□ -2.51
TRAV13-1A0A0B4J241 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU4-9P-201ENST00000364951 139 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-136P-201ENST00000384663 107 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 AC084290.1-201ENST00000434995 374 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 AC116353.2-201ENST00000505332 712 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-107P-201ENST00000516643 102 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU6-448P-201ENST00000517052 107 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 AC104576.1-201ENST00000524225 88 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 MIR5583-1-201ENST00000580941 59 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 SNORD92-201ENST00000585078 85 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 Z84480.1-201ENST00000605131 311 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 AC121333.1-201ENST00000567488 2709 ntBASIC-0.65□□□□□ -2.51
TRAV13-1A0A0B4J241 RNU4-21P-201ENST00000362802 126 ntBASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 RNU6-280P-201ENST00000364145 104 ntBASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 RNU6-125P-201ENST00000384505 107 ntBASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 MIR521-1-201ENST00000384902 87 ntBASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 MIR570-201ENST00000384917 97 ntBASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 MIR125B2-201ENST00000385128 89 ntBASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 MIR802-201ENST00000390235 94 ntBASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 HMGN2P32-201ENST00000444648 269 ntBASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 MTND1P17-201ENST00000448961 204 ntBASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 SNORA18.4-201ENST00000516440 124 ntBASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 SNORD38B-202ENST00000625943 69 ntBASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.66□□□□□ -2.52
TRAV13-1A0A0B4J241 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 SNORA51.10-201ENST00000384418 136 ntBASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 MIR522-201ENST00000385071 87 ntBASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 SNORA26-201ENST00000391286 122 ntBASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 AC092447.3-201ENST00000426027 686 ntBASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 AL512326.2-201ENST00000426359 151 ntBASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 AC026371.1-201ENST00000551867 419 ntBASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 CPDP1-201ENST00000579660 283 ntBASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.67□□□□□ -2.52
TRAV13-1A0A0B4J241 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 RNU6-161P-201ENST00000363051 106 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 RNY4P34-201ENST00000364779 95 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 SNORD14C-201ENST00000365382 88 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 MIR153-2-201ENST00000385225 87 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 RNU6-159P-201ENST00000391080 106 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 HMGN2P22-201ENST00000427588 175 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 RNU7-62P-201ENST00000458856 62 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 RPL39P34-201ENST00000477141 156 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 RNU6-469P-201ENST00000516253 101 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 AL670379.3-201ENST00000605040 251 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 AC246785.4-201ENST00000605374 287 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 AL136370.1-201ENST00000608166 691 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 uc_338.4-201ENST00000616635 176 ntBASIC-0.68□□□□□ -2.52
TRAV13-1A0A0B4J241 RNA5SP457-201ENST00000363657 124 ntBASIC-0.69□□□□□ -2.52
TRAV13-1A0A0B4J241 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms