Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 Y_RNA.561-201ENST00000384694 100 ntBASIC0.52□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR520G-201ENST00000385064 90 ntBASIC0.52□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR548J-201ENST00000408833 112 ntBASIC0.52□□□□□ -2.33
CCNB1IP1Q9NPC3 MTND3P23-201ENST00000431980 347 ntBASIC0.52□□□□□ -2.33
CCNB1IP1Q9NPC3 CYCTP-201ENST00000504253 315 ntBASIC0.52□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6-1278P-201ENST00000516130 107 ntBASIC0.52□□□□□ -2.33
CCNB1IP1Q9NPC3 MTND4LP26-201ENST00000518144 282 ntBASIC0.52□□□□□ -2.33
CCNB1IP1Q9NPC3 AC025627.3-201ENST00000582078 182 ntBASIC0.52□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR3672-201ENST00000584290 82 ntBASIC0.52□□□□□ -2.33
CCNB1IP1Q9NPC3 SEPT14P17-201ENST00000617978 177 ntBASIC0.52□□□□□ -2.33
CCNB1IP1Q9NPC3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6-595P-201ENST00000363944 107 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 Y_RNA.490-201ENST00000384413 102 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 Y_RNA.533-201ENST00000384596 114 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6-908P-201ENST00000410160 94 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 ELOCP21-201ENST00000412558 336 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU4-54P-201ENST00000516428 129 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 AC093023.1-201ENST00000547375 507 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR4714-201ENST00000580728 77 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 AC120024.3-201ENST00000603167 156 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 AL162413.1-201ENST00000603198 110 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 AL078603.1-201ENST00000603824 313 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 AC009229.3-201ENST00000608056 282 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 AC063944.3-201ENST00000609969 533 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 AC007014.2-201ENST00000615581 479 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 AC078883.4-201ENST00000623218 367 ntBASIC0.51□□□□□ -2.33
CCNB1IP1Q9NPC3 ZNF299P-201ENST00000406845 1804 ntBASIC0.5□□□□□ -2.33
CCNB1IP1Q9NPC3 Y_RNA.256-201ENST00000364594 104 ntBASIC0.5□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6-259P-201ENST00000383999 107 ntBASIC0.5□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6-1042P-201ENST00000384204 107 ntBASIC0.5□□□□□ -2.33
CCNB1IP1Q9NPC3 USMG5P1-201ENST00000425964 177 ntBASIC0.5□□□□□ -2.33
CCNB1IP1Q9NPC3 RPL23AP50-201ENST00000434149 455 ntBASIC0.5□□□□□ -2.33
CCNB1IP1Q9NPC3 AL162725.1-201ENST00000435405 301 ntBASIC0.5□□□□□ -2.33
CCNB1IP1Q9NPC3 AC019235.1-201ENST00000503847 207 ntBASIC0.5□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6-405P-201ENST00000516637 110 ntBASIC0.5□□□□□ -2.33
CCNB1IP1Q9NPC3 AC109810.1-201ENST00000534066 224 ntBASIC0.5□□□□□ -2.33
CCNB1IP1Q9NPC3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.5□□□□□ -2.33
CCNB1IP1Q9NPC3 AC093913.1-201ENST00000614178 329 ntBASIC0.5□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR3974-201ENST00000637126 96 ntBASIC0.5□□□□□ -2.33
CCNB1IP1Q9NPC3 AC073544.1-201ENST00000600110 1595 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR103A2-201ENST00000362154 78 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR410-201ENST00000362222 80 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6-222P-201ENST00000362438 107 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 SNORD99-201ENST00000408612 74 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6-1001P-201ENST00000411265 100 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 USP9YP16-201ENST00000430287 407 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 USP9YP23-201ENST00000455085 407 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6-1281P-201ENST00000516223 105 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR5000-201ENST00000577717 103 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 AC005828.6-201ENST00000606610 232 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 AC127459.3-201ENST00000624328 466 ntBASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.49□□□□□ -2.33
CCNB1IP1Q9NPC3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 SNORD116-11-201ENST00000383882 92 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR452-201ENST00000385020 85 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR329-1-201ENST00000385028 80 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 SNORD89-201ENST00000390981 114 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR873-201ENST00000401120 77 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR1185-1-201ENST00000408598 86 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU2-66P-201ENST00000410650 161 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 MTCYBP10-201ENST00000424905 650 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6-1096P-201ENST00000517089 102 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 AC018659.1-201ENST00000551083 169 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 AC023827.1-201ENST00000569247 97 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR3611-201ENST00000584484 83 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 AC125232.2-201ENST00000592457 143 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 RN7SKP299-201ENST00000606679 301 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 U6.115-201ENST00000636045 103 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 AC027514.1-201ENST00000588561 1603 ntBASIC0.48□□□□□ -2.33
CCNB1IP1Q9NPC3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 Y_RNA.414-201ENST00000384011 101 ntBASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6-483P-201ENST00000384088 108 ntBASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 UQCRBP2-201ENST00000447827 297 ntBASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 AC090617.3-201ENST00000573670 475 ntBASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 MIR4273-201ENST00000582824 84 ntBASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 AC100812.1-201ENST00000607622 580 ntBASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 AC244015.1-201ENST00000622301 99 ntBASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.47□□□□□ -2.33
CCNB1IP1Q9NPC3 RNU6-451P-201ENST00000362921 107 ntBASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 Y_RNA.106-201ENST00000363189 100 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms