Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 PRDX4P1-201ENST00000507189 574 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 Y_RNA.683-201ENST00000516508 93 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 AC027419.1-201ENST00000522976 328 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.11□□□□□ -2.23
NPAS2Q99743 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.11□□□□□ -2.23
NPAS2Q99743 AL355073.2-201ENST00000612106 557 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 AC092794.2-201ENST00000620933 563 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 U6.108-201ENST00000637764 58 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
NPAS2Q99743 RNU6-879P-201ENST00000364328 108 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 RNU6-99P-201ENST00000364721 107 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 Y_RNA.364-201ENST00000365532 101 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 Y_RNA.474-201ENST00000384341 102 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 RNU6-310P-201ENST00000384655 107 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 RN7SKP200-201ENST00000410564 320 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 MTCYBP10-201ENST00000424905 650 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 AC098614.3-201ENST00000438957 440 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 AL606517.2-201ENST00000442855 241 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 RPL39P38-201ENST00000467018 153 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.1□□□□□ -2.23
NPAS2Q99743 AC022868.1-201ENST00000517767 391 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 APOOP3-201ENST00000536787 586 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 AL121579.1-201ENST00000555129 305 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 AC004584.2-201ENST00000570407 410 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 AC090617.3-201ENST00000573670 475 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 AC136443.5-201ENST00000603741 370 ntBASIC1.1□□□□□ -2.23
NPAS2Q99743 RNU6-1188P-201ENST00000363795 107 ntBASIC1.09□□□□□ -2.23
NPAS2Q99743 MIR329-1-201ENST00000385028 80 ntBASIC1.09□□□□□ -2.23
NPAS2Q99743 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.09□□□□□ -2.23
NPAS2Q99743 AL133373.1-201ENST00000497098 94 ntBASIC1.09□□□□□ -2.23
NPAS2Q99743 AC005730.3-201ENST00000583067 366 ntBASIC1.09□□□□□ -2.23
NPAS2Q99743 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
NPAS2Q99743 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
NPAS2Q99743 RNU5F-3P-201ENST00000363767 117 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 Y_RNA.303-201ENST00000364998 94 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.08□□□□□ -2.24
NPAS2Q99743 RNU6-1186P-201ENST00000410429 97 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 UQCRBP2-201ENST00000447827 297 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 MTCO3P10-201ENST00000455912 772 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 COX6CP14-201ENST00000469580 174 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 RPL17P19-201ENST00000489069 552 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 AC022493.2-201ENST00000506122 481 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 RNU6-559P-201ENST00000516151 98 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 RNU7-40P-201ENST00000516397 64 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 SNORA31.10-201ENST00000516482 106 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 AC005899.2-201ENST00000584353 90 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
NPAS2Q99743 AC022432.1-201ENST00000595739 310 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 AL390123.1-201ENST00000603216 237 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 AL078603.1-201ENST00000603824 313 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 AC022217.4-201ENST00000604389 163 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.08□□□□□ -2.24
NPAS2Q99743 MTND4LP32-201ENST00000636111 270 ntBASIC1.08□□□□□ -2.24
NPAS2Q99743 Y_RNA.142-201ENST00000363491 102 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 RNY3P11-201ENST00000364153 102 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 RNU6-890P-201ENST00000384121 107 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 RNU6-1145P-201ENST00000384246 107 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 RNU6-318P-201ENST00000384283 103 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 ELOCP21-201ENST00000412558 336 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 RPL30P15-201ENST00000457129 321 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 SNORD65B-201ENST00000459126 73 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 AC105758.1-201ENST00000506038 399 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.07□□□□□ -2.24
NPAS2Q99743 SNORD116-28-201ENST00000516123 91 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 RNA5SP404-201ENST00000517118 132 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 RNU7-128P-201ENST00000517247 62 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 SUMO2P16-201ENST00000519475 264 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 AC023157.2-201ENST00000540596 141 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 AL137100.2-201ENST00000555786 315 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 MIR8054-201ENST00000620877 86 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.07□□□□□ -2.24
NPAS2Q99743 RNU6-1266P-201ENST00000362794 105 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 SNORA72.1-201ENST00000363485 129 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 RNU1-124P-201ENST00000363861 145 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 RNU6-42P-201ENST00000384165 107 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 SNORA75.6-201ENST00000391318 127 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 AC010154.1-201ENST00000425857 269 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.06□□□□□ -2.24
NPAS2Q99743 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.06□□□□□ -2.24
NPAS2Q99743 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
NPAS2Q99743 MIR2053-201ENST00000459295 91 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.06□□□□□ -2.24
NPAS2Q99743 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.06□□□□□ -2.24
NPAS2Q99743 RNU6-307P-201ENST00000516743 106 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 AP002001.1-203ENST00000534002 267 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 AC011604.1-201ENST00000545978 196 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 RMST_2.1-201ENST00000617263 136 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 MIR6734-201ENST00000621166 68 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 AL513423.1-201ENST00000621695 132 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 AC027335.2-201ENST00000624030 375 ntBASIC1.06□□□□□ -2.24
NPAS2Q99743 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
NPAS2Q99743 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
NPAS2Q99743 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
NPAS2Q99743 SNORA25-201ENST00000384384 134 ntBASIC1.05□□□□□ -2.24
NPAS2Q99743 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
NPAS2Q99743 MRPL42P3-201ENST00000401492 326 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms