Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 HMGN2P34-201ENST00000437647 269 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 AL353689.1-201ENST00000438895 199 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 AC011406.1-201ENST00000512440 370 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 RNA5SP200-201ENST00000516360 103 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 RNU6-966P-201ENST00000516479 104 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 IGLV3-17-201ENST00000519099 244 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 AC027419.1-201ENST00000522976 328 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 AC121758.2-201ENST00000553271 193 ntBASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.38□□□□□ -2.03
TRIM43Q96BQ3 SNORA3A-201ENST00000364113 130 ntBASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 RNU6-514P-201ENST00000384208 107 ntBASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 SNORA20B-201ENST00000384220 132 ntBASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 RNU6-574P-201ENST00000384265 107 ntBASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 Y_RNA.483-201ENST00000384380 101 ntBASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 MTND4LP30-201ENST00000454092 297 ntBASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 AC004817.2-201ENST00000561794 651 ntBASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 AC005828.6-201ENST00000606610 232 ntBASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 MIR6895-201ENST00000613497 78 ntBASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 AC127459.3-201ENST00000624328 466 ntBASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 AC006435.5-201ENST00000624486 112 ntBASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
TRIM43Q96BQ3 snoU2-30.2-201ENST00000362805 70 ntBASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 Y_RNA.329-201ENST00000365209 107 ntBASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 MIR518A2-201ENST00000384966 87 ntBASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 MT-TW-201ENST00000387382 68 ntBASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 HMGN2P39-201ENST00000398005 273 ntBASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 MIR873-201ENST00000401120 77 ntBASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 BX510359.4-201ENST00000423750 193 ntBASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 RNU6-436P-201ENST00000516171 114 ntBASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 RNU2-31P-201ENST00000516954 155 ntBASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 AP005660.1-201ENST00000522972 293 ntBASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 DEFB108E-201ENST00000524692 240 ntBASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 MIR3169-201ENST00000578032 83 ntBASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 AC078899.2-201ENST00000595282 212 ntBASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.36□□□□□ -2.03
TRIM43Q96BQ3 SNORA25.1-201ENST00000362326 128 ntBASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 Y_RNA.193-201ENST00000363979 102 ntBASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 RNU6-407P-201ENST00000365280 104 ntBASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 RNU6-472P-201ENST00000384299 107 ntBASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 RNU11-3P-201ENST00000391111 133 ntBASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 AL355796.1-201ENST00000406706 323 ntBASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 CR769767.1-201ENST00000436337 346 ntBASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 MRPS10P1-201ENST00000448483 130 ntBASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 RPS27P22-201ENST00000478056 241 ntBASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 RNU6-1338P-201ENST00000516328 91 ntBASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 AL137100.2-201ENST00000555786 315 ntBASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 DEFB117-201ENST00000602356 141 ntBASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 AC009831.4-201ENST00000620744 325 ntBASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM43Q96BQ3 AC010615.1-201ENST00000594254 1764 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 AL391987.6-201ENST00000305671 199 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 Y_RNA.16-201ENST00000362421 102 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 SNORD114-7-201ENST00000362520 77 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 SNORA27.1-201ENST00000362604 124 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 RNU6-326P-201ENST00000365480 107 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 DEFA7P-201ENST00000382676 285 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 RNU6-1248P-201ENST00000391096 64 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 RNA5SP465-201ENST00000391195 109 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 RNU6-710P-201ENST00000410424 105 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 AC010154.1-201ENST00000425857 269 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 AP000942.4-201ENST00000604811 241 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 AL353149.1-201ENST00000610667 244 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 MIR6132-201ENST00000622083 109 ntBASIC2.34□□□□□ -2.03
TRIM43Q96BQ3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
TRIM43Q96BQ3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
TRIM43Q96BQ3 CENPCP1-201ENST00000533085 2578 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.136-201ENST00000363444 102 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.237-201ENST00000364439 102 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 RNU6-505P-201ENST00000384427 107 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 MIR583-201ENST00000384846 75 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 RNA5SP181-201ENST00000410246 98 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 RPL23AP7-203ENST00000449021 469 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 RNA5SP20-201ENST00000515976 84 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 RNU7-193P-201ENST00000516723 65 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 SCARNA24.2-201ENST00000516968 130 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 MIR4529-201ENST00000578110 78 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 MIR3145-201ENST00000580727 82 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 AC005786.1-201ENST00000588553 154 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 AP001282.2-201ENST00000616149 309 ntBASIC2.33□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.361-201ENST00000365515 120 ntBASIC2.32□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.401-201ENST00000383965 117 ntBASIC2.32□□□□□ -2.04
TRIM43Q96BQ3 RNU6-417P-201ENST00000384712 107 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 1094.8 ms