Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNU4-17P-201ENST00000365598 141 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 Y_RNA.580-201ENST00000391004 95 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 AL031003.1-201ENST00000404229 172 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 MTATP6P29-201ENST00000415057 132 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.8□□□□□ -1.96
SYNE4Q8N205 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.8□□□□□ -1.96
SYNE4Q8N205 SNORD116-25-201ENST00000516517 92 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 RNU6-56P-201ENST00000516986 93 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 EIF4A1P12-201ENST00000551910 141 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.8□□□□□ -1.96
SYNE4Q8N205 AC090616.3-201ENST00000582184 217 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 MIR5006-201ENST00000583027 110 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 SNRPGP20-201ENST00000604477 205 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 MIR6766-201ENST00000622641 72 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.8□□□□□ -1.96
SYNE4Q8N205 RNU1-72P-201ENST00000362976 153 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 RNU5F-3P-201ENST00000363767 117 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 SNORA68.1-201ENST00000364537 132 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 RNU6-1310P-201ENST00000384153 107 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 RNU6-381P-201ENST00000391259 108 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SYNE4Q8N205 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.79□□□□□ -1.96
SYNE4Q8N205 SEM1P1-201ENST00000506694 209 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.79□□□□□ -1.96
SYNE4Q8N205 RNA5SP112-201ENST00000515937 99 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 RNU6-426P-201ENST00000516464 97 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.79□□□□□ -1.96
SYNE4Q8N205 MIR4498-201ENST00000577599 66 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 AC103810.1-201ENST00000579873 453 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 AL713866.2-201ENST00000603579 219 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 SNORD11B-201ENST00000607707 90 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.79□□□□□ -1.96
SYNE4Q8N205 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SYNE4Q8N205 AC068205.3-201ENST00000636385 468 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 MIR219B-201ENST00000637023 88 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 AC092881.1-201ENST00000638218 2733 ntBASIC2.79□□□□□ -1.96
SYNE4Q8N205 RNU1-17P-201ENST00000363022 152 ntBASIC2.78□□□□□ -1.96
SYNE4Q8N205 Y_RNA.172-201ENST00000363765 102 ntBASIC2.78□□□□□ -1.96
SYNE4Q8N205 RNU4-84P-201ENST00000364200 139 ntBASIC2.78□□□□□ -1.96
SYNE4Q8N205 RPL23AP58-201ENST00000440453 469 ntBASIC2.78□□□□□ -1.96
SYNE4Q8N205 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.78□□□□□ -1.96
SYNE4Q8N205 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.78□□□□□ -1.96
SYNE4Q8N205 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.78□□□□□ -1.96
SYNE4Q8N205 RNU2-44P-201ENST00000516795 194 ntBASIC2.78□□□□□ -1.96
SYNE4Q8N205 AP001485.1-201ENST00000604799 199 ntBASIC2.78□□□□□ -1.96
SYNE4Q8N205 TCL6_2.1-201ENST00000615162 119 ntBASIC2.78□□□□□ -1.96
SYNE4Q8N205 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SYNE4Q8N205 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SYNE4Q8N205 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.78□□□□□ -1.97
SYNE4Q8N205 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SYNE4Q8N205 Y_RNA.75-201ENST00000362927 97 ntBASIC2.77□□□□□ -1.97
SYNE4Q8N205 RNU6-486P-201ENST00000363116 107 ntBASIC2.77□□□□□ -1.97
SYNE4Q8N205 Y_RNA.568-201ENST00000384742 113 ntBASIC2.77□□□□□ -1.97
SYNE4Q8N205 SNORA80E-201ENST00000384744 137 ntBASIC2.77□□□□□ -1.97
SYNE4Q8N205 MIR548B-201ENST00000385247 97 ntBASIC2.77□□□□□ -1.97
SYNE4Q8N205 RPL30P4-201ENST00000429309 333 ntBASIC2.77□□□□□ -1.97
SYNE4Q8N205 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.77□□□□□ -1.97
SYNE4Q8N205 SCARNA8-201ENST00000515924 131 ntBASIC2.77□□□□□ -1.97
SYNE4Q8N205 RNU6-344P-201ENST00000516635 111 ntBASIC2.77□□□□□ -1.97
SYNE4Q8N205 RNU6-453P-201ENST00000516819 85 ntBASIC2.77□□□□□ -1.97
SYNE4Q8N205 AC009127.3-201ENST00000570531 403 ntBASIC2.77□□□□□ -1.97
SYNE4Q8N205 AC006380.1-201ENST00000603598 186 ntBASIC2.77□□□□□ -1.97
SYNE4Q8N205 MIR3658-201ENST00000636291 56 ntBASIC2.77□□□□□ -1.97
SYNE4Q8N205 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SYNE4Q8N205 AC100821.1-201ENST00000523153 2479 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 AC010329.5-201ENST00000623497 2174 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
SYNE4Q8N205 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SYNE4Q8N205 U3.9-201ENST00000363823 204 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 Y_RNA.243-201ENST00000364481 109 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 Y_RNA.497-201ENST00000384447 98 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 Y_RNA.508-201ENST00000384502 114 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 MICF-203ENST00000432679 129 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 AL162725.1-201ENST00000435405 301 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SYNE4Q8N205 RNA5SP445-201ENST00000515889 115 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 RNU6-295P-201ENST00000516901 104 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 AC136628.3-201ENST00000521868 290 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.76□□□□□ -1.97
SYNE4Q8N205 RPL30P11-203ENST00000598995 310 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 AC013791.1-201ENST00000616619 62 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 U6.115-201ENST00000636045 103 ntBASIC2.76□□□□□ -1.97
SYNE4Q8N205 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.76□□□□□ -1.97
SYNE4Q8N205 Y_RNA.23-201ENST00000362496 106 ntBASIC2.75□□□□□ -1.97
SYNE4Q8N205 Y_RNA.215-201ENST00000364204 112 ntBASIC2.75□□□□□ -1.97
SYNE4Q8N205 Y_RNA.355-201ENST00000365462 98 ntBASIC2.75□□□□□ -1.97
SYNE4Q8N205 RNU6-449P-201ENST00000383914 107 ntBASIC2.75□□□□□ -1.97
SYNE4Q8N205 Y_RNA.400-201ENST00000383963 111 ntBASIC2.75□□□□□ -1.97
SYNE4Q8N205 SNORA72.4-201ENST00000384174 132 ntBASIC2.75□□□□□ -1.97
SYNE4Q8N205 MIR218-1-201ENST00000384999 110 ntBASIC2.75□□□□□ -1.97
SYNE4Q8N205 MIR569-201ENST00000385228 96 ntBASIC2.75□□□□□ -1.97
SYNE4Q8N205 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.75□□□□□ -1.97
SYNE4Q8N205 MIR3199-1-201ENST00000582434 88 ntBASIC2.75□□□□□ -1.97
SYNE4Q8N205 AC069294.1-201ENST00000608397 350 ntBASIC2.75□□□□□ -1.97
SYNE4Q8N205 U2.20-201ENST00000613956 192 ntBASIC2.75□□□□□ -1.97
SYNE4Q8N205 AL078604.3-201ENST00000615580 211 ntBASIC2.75□□□□□ -1.97
SYNE4Q8N205 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SYNE4Q8N205 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SYNE4Q8N205 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SYNE4Q8N205 Y_RNA.124-201ENST00000363339 93 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 185.8 ms