Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC080100.1-201ENST00000624239 5356 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 RNU4-10P-201ENST00000364383 140 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 Y_RNA.571-201ENST00000384753 98 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
KRT40Q6A162 RNA5SP181-201ENST00000410246 98 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 RNU6-855P-201ENST00000410395 104 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.77□□□□□ -1.97
KRT40Q6A162 AC104389.3-201ENST00000445629 235 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 AC016717.1-201ENST00000448918 286 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 RNU7-57P-201ENST00000459540 60 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 RNU6-1278P-201ENST00000516130 107 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 RNU6-965P-201ENST00000516721 96 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.77□□□□□ -1.97
KRT40Q6A162 AC067747.1-201ENST00000608026 250 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 AC013791.1-201ENST00000616619 62 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
KRT40Q6A162 U2.22-201ENST00000636441 106 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.77□□□□□ -1.97
KRT40Q6A162 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
KRT40Q6A162 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.77□□□□□ -1.97
KRT40Q6A162 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
KRT40Q6A162 AC016717.2-201ENST00000609089 5141 ntBASIC2.77□□□□□ -1.97
KRT40Q6A162 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.76□□□□□ -1.97
KRT40Q6A162 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
KRT40Q6A162 RNU6-975P-201ENST00000384296 105 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 SNORD14D-201ENST00000384390 87 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 RNU2-2P-201ENST00000410396 191 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 AC016925.1-201ENST00000458303 298 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 AC091021.1-201ENST00000468051 388 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 RN7SL636P-201ENST00000497504 294 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 AC026436.1-201ENST00000510537 270 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.76□□□□□ -1.97
KRT40Q6A162 MIR3144-201ENST00000579460 79 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 RNU2-4P-201ENST00000606190 192 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 AC104465.1-201ENST00000611365 139 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 U2.15-201ENST00000611544 191 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 U2.16-201ENST00000613119 191 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 U2.12-201ENST00000613778 191 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 U2.9-201ENST00000615427 191 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 U2.11-201ENST00000616345 191 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 U2.2-201ENST00000616535 191 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 U2.3-201ENST00000617785 191 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 U2.19-201ENST00000618602 191 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 RNU2-1-201ENST00000618664 191 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 U2.6-201ENST00000619225 191 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 U2.5-201ENST00000619465 191 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 U2.10-201ENST00000620268 191 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 MIR7157-201ENST00000635801 60 ntBASIC2.76□□□□□ -1.97
KRT40Q6A162 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
KRT40Q6A162 RNU1-23P-201ENST00000363361 144 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 RNU1-51P-201ENST00000365345 176 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 RNU4-17P-201ENST00000365598 141 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 Y_RNA.441-201ENST00000384123 112 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 SNORA20B-201ENST00000384220 132 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 Y_RNA.572-201ENST00000384757 98 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 RNU6-381P-201ENST00000391259 108 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 MIR300-201ENST00000401138 83 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 MTCO2P33-201ENST00000402100 465 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 RNU6-221P-201ENST00000459541 99 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.75□□□□□ -1.97
KRT40Q6A162 RNU6-346P-201ENST00000516288 111 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 PRELID2P1-201ENST00000552837 301 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 MIR3910-1-201ENST00000580936 111 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 snoZ196.1-201ENST00000625269 89 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 MIR1291-201ENST00000627649 87 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 AC138915.1-201ENST00000565427 1685 ntBASIC2.75□□□□□ -1.97
KRT40Q6A162 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.74□□□□□ -1.97
KRT40Q6A162 snoU2_19.4-201ENST00000364329 80 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 Y_RNA.287-201ENST00000364853 94 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 SNORD31B-201ENST00000364977 69 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 Y_RNA.341-201ENST00000365341 102 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 Y_RNA.412-201ENST00000384001 104 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 Y_RNA.456-201ENST00000384232 111 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 MIR95-201ENST00000385072 81 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 RNU6-710P-201ENST00000410424 105 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 AC016909.1-201ENST00000415916 166 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.74□□□□□ -1.97
KRT40Q6A162 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.74□□□□□ -1.97
KRT40Q6A162 RPL23AP7-203ENST00000449021 469 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 RNU7-200P-201ENST00000516105 62 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
KRT40Q6A162 MIR4753-201ENST00000585119 83 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 AC103810.6-201ENST00000606708 136 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
KRT40Q6A162 AL353997.5-201ENST00000618886 171 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.74□□□□□ -1.97
KRT40Q6A162 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KRT40Q6A162 Y_RNA.7-201ENST00000362352 102 ntBASIC2.73□□□□□ -1.97
KRT40Q6A162 RNU6-1180P-201ENST00000364935 107 ntBASIC2.73□□□□□ -1.97
KRT40Q6A162 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
KRT40Q6A162 Y_RNA.398-201ENST00000383952 99 ntBASIC2.73□□□□□ -1.97
KRT40Q6A162 SNORD116-13-201ENST00000384408 92 ntBASIC2.73□□□□□ -1.97
KRT40Q6A162 RNU2-48P-201ENST00000410694 191 ntBASIC2.73□□□□□ -1.97
KRT40Q6A162 RNU6-57P-201ENST00000411348 103 ntBASIC2.73□□□□□ -1.97
KRT40Q6A162 Z82209.1-201ENST00000422141 2135 ntBASIC2.73□□□□□ -1.97
KRT40Q6A162 SNORD65B-201ENST00000459126 73 ntBASIC2.73□□□□□ -1.97
KRT40Q6A162 RNU7-141P-201ENST00000459304 62 ntBASIC2.73□□□□□ -1.97
KRT40Q6A162 RNA5SP458-201ENST00000516188 119 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms