Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL357078.3-201ENST00000607528 618 ntBASIC-0.29□□□□□ -2.46
TPM4P67936 AC009248.2-201ENST00000619826 254 ntBASIC-0.29□□□□□ -2.46
TPM4P67936 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.29□□□□□ -2.46
TPM4P67936 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.29□□□□□ -2.46
TPM4P67936 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.29□□□□□ -2.46
TPM4P67936 MTCYBP4-201ENST00000401524 249 ntBASIC-0.3□□□□□ -2.46
TPM4P67936 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.3□□□□□ -2.46
TPM4P67936 AL590632.1-201ENST00000424289 371 ntBASIC-0.3□□□□□ -2.46
TPM4P67936 MTCO2P11-201ENST00000431069 680 ntBASIC-0.3□□□□□ -2.46
TPM4P67936 RNU6-107P-201ENST00000516643 102 ntBASIC-0.3□□□□□ -2.46
TPM4P67936 UBL5P4-201ENST00000562584 236 ntBASIC-0.3□□□□□ -2.46
TPM4P67936 MTND1P8-201ENST00000571424 950 ntBASIC-0.3□□□□□ -2.46
TPM4P67936 MIR4804-201ENST00000581683 73 ntBASIC-0.3□□□□□ -2.46
TPM4P67936 AL136370.1-201ENST00000608166 691 ntBASIC-0.3□□□□□ -2.46
TPM4P67936 AF250324.2-201ENST00000608299 610 ntBASIC-0.3□□□□□ -2.46
TPM4P67936 AL158063.1-201ENST00000615349 536 ntBASIC-0.3□□□□□ -2.46
TPM4P67936 AC091925.1-201ENST00000623204 462 ntBASIC-0.3□□□□□ -2.46
TPM4P67936 AC127459.3-201ENST00000624328 466 ntBASIC-0.3□□□□□ -2.46
TPM4P67936 RNU6-580P-201ENST00000365159 107 ntBASIC-0.31□□□□□ -2.46
TPM4P67936 SNORA8.2-201ENST00000384372 139 ntBASIC-0.31□□□□□ -2.46
TPM4P67936 RNU6-297P-201ENST00000384636 107 ntBASIC-0.31□□□□□ -2.46
TPM4P67936 RNU6-541P-201ENST00000384709 110 ntBASIC-0.31□□□□□ -2.46
TPM4P67936 MIR620-201ENST00000385232 95 ntBASIC-0.31□□□□□ -2.46
TPM4P67936 MTND1P26-201ENST00000440488 538 ntBASIC-0.31□□□□□ -2.46
TPM4P67936 AC073415.1-201ENST00000449240 153 ntBASIC-0.31□□□□□ -2.46
TPM4P67936 snoU13.21-201ENST00000459368 105 ntBASIC-0.31□□□□□ -2.46
TPM4P67936 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.31□□□□□ -2.46
TPM4P67936 AL355375.2-201ENST00000574825 175 ntBASIC-0.31□□□□□ -2.46
TPM4P67936 MIR5692C1-201ENST00000585309 91 ntBASIC-0.31□□□□□ -2.46
TPM4P67936 AC090517.2-201ENST00000614966 680 ntBASIC-0.31□□□□□ -2.46
TPM4P67936 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
TPM4P67936 RNU6-82P-201ENST00000363970 107 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 RNU6-934P-201ENST00000365154 107 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 RNU6-396P-201ENST00000365369 105 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 RNY1P14-201ENST00000384426 108 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 RNY3P9-201ENST00000384727 106 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 SNORA75.6-201ENST00000391318 127 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 AL606923.1-201ENST00000406616 190 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 MTCO2P16-201ENST00000436962 677 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 TPTE2P5-203ENST00000458118 728 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 SNORD42A-201ENST00000459584 64 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.32□□□□□ -2.46
TPM4P67936 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.32□□□□□ -2.46
TPM4P67936 AL133215.3-201ENST00000609801 448 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 AL591926.4-201ENST00000616895 298 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 AP002371.2-201ENST00000624450 503 ntBASIC-0.32□□□□□ -2.46
TPM4P67936 MIR377-201ENST00000362145 69 ntBASIC-0.33□□□□□ -2.46
TPM4P67936 RNU6-996P-201ENST00000365438 107 ntBASIC-0.33□□□□□ -2.46
TPM4P67936 RNA5SP496-201ENST00000391240 109 ntBASIC-0.33□□□□□ -2.46
TPM4P67936 MTATP6P18-201ENST00000417994 673 ntBASIC-0.33□□□□□ -2.46
TPM4P67936 AL353997.1-201ENST00000432936 108 ntBASIC-0.33□□□□□ -2.46
TPM4P67936 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.33□□□□□ -2.46
TPM4P67936 RNU7-63P-201ENST00000459054 62 ntBASIC-0.33□□□□□ -2.46
TPM4P67936 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.33□□□□□ -2.46
TPM4P67936 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.33□□□□□ -2.46
TPM4P67936 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.33□□□□□ -2.46
TPM4P67936 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.33□□□□□ -2.46
TPM4P67936 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.33□□□□□ -2.46
TPM4P67936 MIR6515-201ENST00000619843 57 ntBASIC-0.33□□□□□ -2.46
TPM4P67936 AC022306.3-201ENST00000619930 550 ntBASIC-0.33□□□□□ -2.46
TPM4P67936 SNORD114-26-201ENST00000363543 72 ntBASIC-0.34□□□□□ -2.46
TPM4P67936 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.34□□□□□ -2.46
TPM4P67936 SNORA32.1-201ENST00000364514 115 ntBASIC-0.34□□□□□ -2.46
TPM4P67936 RNU6-214P-201ENST00000384130 107 ntBASIC-0.34□□□□□ -2.46
TPM4P67936 SNORD100-201ENST00000408573 76 ntBASIC-0.34□□□□□ -2.46
TPM4P67936 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.34□□□□□ -2.46
TPM4P67936 SNORA40.12-201ENST00000516329 111 ntBASIC-0.34□□□□□ -2.46
TPM4P67936 AC141557.1-201ENST00000540982 400 ntBASIC-0.34□□□□□ -2.46
TPM4P67936 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.34□□□□□ -2.46
TPM4P67936 AC100830.2-201ENST00000581636 240 ntBASIC-0.34□□□□□ -2.46
TPM4P67936 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.34□□□□□ -2.46
TPM4P67936 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.35□□□□□ -2.47
TPM4P67936 MT-TN-201ENST00000387400 73 ntBASIC-0.35□□□□□ -2.47
TPM4P67936 RNU6-248P-201ENST00000410720 107 ntBASIC-0.35□□□□□ -2.47
TPM4P67936 AL390729.2-201ENST00000416137 156 ntBASIC-0.35□□□□□ -2.47
TPM4P67936 RPL30P16-201ENST00000419341 429 ntBASIC-0.35□□□□□ -2.47
TPM4P67936 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.35□□□□□ -2.47
TPM4P67936 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.35□□□□□ -2.47
TPM4P67936 RNU7-56P-201ENST00000458744 62 ntBASIC-0.35□□□□□ -2.47
TPM4P67936 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.35□□□□□ -2.47
TPM4P67936 MIR4771-2-201ENST00000577758 74 ntBASIC-0.35□□□□□ -2.47
TPM4P67936 MIR4771-1-201ENST00000582617 74 ntBASIC-0.35□□□□□ -2.47
TPM4P67936 AC092747.3-201ENST00000603769 301 ntBASIC-0.35□□□□□ -2.47
TPM4P67936 AL121757.2-201ENST00000611223 313 ntBASIC-0.35□□□□□ -2.47
TPM4P67936 SNORA9.1-201ENST00000362412 131 ntBASIC-0.36□□□□□ -2.47
TPM4P67936 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.36□□□□□ -2.47
TPM4P67936 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.36□□□□□ -2.47
TPM4P67936 AL353572.1-201ENST00000442490 417 ntBASIC-0.36□□□□□ -2.47
TPM4P67936 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.36□□□□□ -2.47
TPM4P67936 AC005609.4-201ENST00000625071 447 ntBASIC-0.36□□□□□ -2.47
TPM4P67936 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.36□□□□□ -2.47
TPM4P67936 RNU6-222P-201ENST00000362438 107 ntBASIC-0.37□□□□□ -2.47
TPM4P67936 RNU6-136P-201ENST00000384663 107 ntBASIC-0.37□□□□□ -2.47
TPM4P67936 MIR598-201ENST00000384868 97 ntBASIC-0.37□□□□□ -2.47
TPM4P67936 MIR873-201ENST00000401120 77 ntBASIC-0.37□□□□□ -2.47
TPM4P67936 RNU2-59P-201ENST00000410482 191 ntBASIC-0.37□□□□□ -2.47
TPM4P67936 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.37□□□□□ -2.47
TPM4P67936 MIR5190-201ENST00000581537 80 ntBASIC-0.37□□□□□ -2.47
TPM4P67936 MIR4676-201ENST00000583078 72 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms