Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MIR1302-4-201ENST00000408701 150 ntBASIC3.39□□□□□ -1.87
NFKB1P19838 Y_RNA.621-201ENST00000411065 96 ntBASIC3.39□□□□□ -1.87
NFKB1P19838 RNU2-32P-201ENST00000411193 191 ntBASIC3.39□□□□□ -1.87
NFKB1P19838 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.39□□□□□ -1.87
NFKB1P19838 HMGN1P7-201ENST00000491722 313 ntBASIC3.39□□□□□ -1.87
NFKB1P19838 PHBP14-201ENST00000512887 367 ntBASIC3.39□□□□□ -1.87
NFKB1P19838 SNORA4.4-201ENST00000515921 135 ntBASIC3.39□□□□□ -1.87
NFKB1P19838 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.39□□□□□ -1.87
NFKB1P19838 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.39□□□□□ -1.87
NFKB1P19838 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.39□□□□□ -1.87
NFKB1P19838 AC007012.1-201ENST00000567192 175 ntBASIC3.39□□□□□ -1.87
NFKB1P19838 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.39□□□□□ -1.87
NFKB1P19838 AC073413.2-201ENST00000604332 360 ntBASIC3.39□□□□□ -1.87
NFKB1P19838 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.39□□□□□ -1.87
NFKB1P19838 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.39□□□□□ -1.87
NFKB1P19838 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NFKB1P19838 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
NFKB1P19838 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NFKB1P19838 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.38□□□□□ -1.87
NFKB1P19838 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NFKB1P19838 Y_RNA.85-201ENST00000363014 111 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 RNA5SP50-201ENST00000363731 107 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 SNORD46.1-201ENST00000364139 104 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 RNA5SP125-201ENST00000364843 120 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 Y_RNA.332-201ENST00000365271 113 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 RNY4P30-201ENST00000410216 95 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 RNU6-1328P-201ENST00000410938 106 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 AC093578.1-201ENST00000415219 368 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 AC123900.1-201ENST00000420390 96 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 HMGN1P18-201ENST00000457642 277 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.38□□□□□ -1.87
NFKB1P19838 AC096725.1-201ENST00000514266 313 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 RNU6-1270P-201ENST00000517128 108 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 RNU6-711P-201ENST00000517255 106 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 MIR4474-201ENST00000579189 78 ntBASIC3.38□□□□□ -1.87
NFKB1P19838 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
NFKB1P19838 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NFKB1P19838 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
NFKB1P19838 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NFKB1P19838 Y_RNA.253-201ENST00000364562 112 ntBASIC3.37□□□□□ -1.87
NFKB1P19838 SNORD12C-201ENST00000386307 89 ntBASIC3.37□□□□□ -1.87
NFKB1P19838 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.37□□□□□ -1.87
NFKB1P19838 COX6CP6-201ENST00000490840 228 ntBASIC3.37□□□□□ -1.87
NFKB1P19838 AC093259.1-201ENST00000509755 300 ntBASIC3.37□□□□□ -1.87
NFKB1P19838 RNU6-1149P-201ENST00000516810 97 ntBASIC3.37□□□□□ -1.87
NFKB1P19838 MIR4276-201ENST00000584832 70 ntBASIC3.37□□□□□ -1.87
NFKB1P19838 AC008507.4-201ENST00000585464 127 ntBASIC3.37□□□□□ -1.87
NFKB1P19838 SNORA50A-202ENST00000629536 136 ntBASIC3.37□□□□□ -1.87
NFKB1P19838 MIR7157-201ENST00000635801 60 ntBASIC3.37□□□□□ -1.87
NFKB1P19838 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NFKB1P19838 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NFKB1P19838 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NFKB1P19838 RNU6-766P-201ENST00000362478 107 ntBASIC3.36□□□□□ -1.87
NFKB1P19838 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.36□□□□□ -1.87
NFKB1P19838 RNU6-905P-201ENST00000384434 107 ntBASIC3.36□□□□□ -1.87
NFKB1P19838 SNORD72-201ENST00000390994 80 ntBASIC3.36□□□□□ -1.87
NFKB1P19838 AC007064.1-201ENST00000412238 351 ntBASIC3.36□□□□□ -1.87
NFKB1P19838 SNRPGP10-201ENST00000432323 225 ntBASIC3.36□□□□□ -1.87
NFKB1P19838 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.36□□□□□ -1.87
NFKB1P19838 HMGN2P34-201ENST00000437647 269 ntBASIC3.36□□□□□ -1.87
NFKB1P19838 RN7SL293P-201ENST00000481765 281 ntBASIC3.36□□□□□ -1.87
NFKB1P19838 SCARNA3-201ENST00000517097 143 ntBASIC3.36□□□□□ -1.87
NFKB1P19838 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.36□□□□□ -1.87
NFKB1P19838 uc_338.1-201ENST00000612113 180 ntBASIC3.36□□□□□ -1.87
NFKB1P19838 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.36□□□□□ -1.87
NFKB1P19838 AC009831.4-201ENST00000620744 325 ntBASIC3.36□□□□□ -1.87
NFKB1P19838 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
NFKB1P19838 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NFKB1P19838 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NFKB1P19838 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NFKB1P19838 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
NFKB1P19838 MIR340-201ENST00000362125 95 ntBASIC3.35□□□□□ -1.87
NFKB1P19838 SNORA71.3-201ENST00000362582 128 ntBASIC3.35□□□□□ -1.87
NFKB1P19838 RNU6-743P-201ENST00000364151 106 ntBASIC3.35□□□□□ -1.87
NFKB1P19838 SNORA12.1-201ENST00000390873 148 ntBASIC3.35□□□□□ -1.87
NFKB1P19838 AC060773.1-201ENST00000421698 310 ntBASIC3.35□□□□□ -1.87
NFKB1P19838 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.35□□□□□ -1.87
NFKB1P19838 SCARNA13-201ENST00000516672 275 ntBASIC3.35□□□□□ -1.87
NFKB1P19838 SCARNA15-202ENST00000516881 127 ntBASIC3.35□□□□□ -1.87
NFKB1P19838 RNU7-128P-201ENST00000517247 62 ntBASIC3.35□□□□□ -1.87
NFKB1P19838 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.35□□□□□ -1.87
NFKB1P19838 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NFKB1P19838 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NFKB1P19838 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NFKB1P19838 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
NFKB1P19838 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
NFKB1P19838 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NFKB1P19838 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
NFKB1P19838 Y_RNA.163-201ENST00000363702 113 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 RNU1-33P-201ENST00000364249 162 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 Y_RNA.328-201ENST00000365208 113 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 Y_RNA.348-201ENST00000365403 103 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 MIR548A2-201ENST00000384956 97 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 MIR218-1-201ENST00000384999 110 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 MIR95-201ENST00000385072 81 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 RNU11-5P-201ENST00000391216 129 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 RNU6-1186P-201ENST00000410429 97 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 RNA5SP229-201ENST00000410809 99 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms