Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RNU6-1123P-201ENST00000362347 106 ntBASIC1.16□□□□□ -2.22
TRIM3O75382 RNU6-392P-201ENST00000364926 101 ntBASIC1.16□□□□□ -2.22
TRIM3O75382 SNORD12B-201ENST00000410433 91 ntBASIC1.16□□□□□ -2.22
TRIM3O75382 SNX2P2-201ENST00000424553 323 ntBASIC1.16□□□□□ -2.22
TRIM3O75382 STAG3L5P-204ENST00000443759 179 ntBASIC1.16□□□□□ -2.22
TRIM3O75382 PGBD4P5-201ENST00000445958 426 ntBASIC1.16□□□□□ -2.22
TRIM3O75382 RPS29P29-201ENST00000456396 171 ntBASIC1.16□□□□□ -2.22
TRIM3O75382 RNU7-94P-201ENST00000459576 63 ntBASIC1.16□□□□□ -2.22
TRIM3O75382 AC097462.1-201ENST00000514125 324 ntBASIC1.16□□□□□ -2.22
TRIM3O75382 AC074133.1-201ENST00000515696 183 ntBASIC1.16□□□□□ -2.22
TRIM3O75382 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.16□□□□□ -2.22
TRIM3O75382 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.16□□□□□ -2.22
TRIM3O75382 AC006435.5-201ENST00000624486 112 ntBASIC1.16□□□□□ -2.22
TRIM3O75382 MIR6079-201ENST00000635807 62 ntBASIC1.16□□□□□ -2.22
TRIM3O75382 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TRIM3O75382 RNY1P10-201ENST00000363268 113 ntBASIC1.15□□□□□ -2.23
TRIM3O75382 RNU1-22P-201ENST00000363334 158 ntBASIC1.15□□□□□ -2.23
TRIM3O75382 MTCYBP4-201ENST00000401524 249 ntBASIC1.15□□□□□ -2.23
TRIM3O75382 AL034345.1-201ENST00000407768 123 ntBASIC1.15□□□□□ -2.23
TRIM3O75382 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.15□□□□□ -2.23
TRIM3O75382 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
TRIM3O75382 AC022493.2-201ENST00000506122 481 ntBASIC1.15□□□□□ -2.23
TRIM3O75382 RNA5SP20-201ENST00000515976 84 ntBASIC1.15□□□□□ -2.23
TRIM3O75382 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.15□□□□□ -2.23
TRIM3O75382 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.15□□□□□ -2.23
TRIM3O75382 AC106754.2-201ENST00000623006 233 ntBASIC1.15□□□□□ -2.23
TRIM3O75382 Y_RNA.4-201ENST00000362333 112 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 SNORA27.1-201ENST00000362604 124 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 RNU6-1301P-201ENST00000362724 104 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 RNU6-1188P-201ENST00000363795 107 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 RNU6-454P-201ENST00000364292 107 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 Y_RNA.267-201ENST00000364679 109 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 RNA5SP475-201ENST00000410568 110 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 MTCO3P19-201ENST00000415864 321 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 AC018865.2-201ENST00000423631 129 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 RAB28P5-201ENST00000427490 651 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.14□□□□□ -2.23
TRIM3O75382 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.14□□□□□ -2.23
TRIM3O75382 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.14□□□□□ -2.23
TRIM3O75382 RNU6-264P-201ENST00000517134 104 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 RAB11AP2-201ENST00000545905 639 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 AL512310.8-201ENST00000550183 120 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.14□□□□□ -2.23
TRIM3O75382 RPL21P9-201ENST00000556149 474 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.14□□□□□ -2.23
TRIM3O75382 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 SNORD3E-202ENST00000627253 216 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 U6.115-201ENST00000636045 103 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 MIR3674-201ENST00000636576 68 ntBASIC1.14□□□□□ -2.23
TRIM3O75382 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TRIM3O75382 Y_RNA.124-201ENST00000363339 93 ntBASIC1.13□□□□□ -2.23
TRIM3O75382 RNY3P11-201ENST00000364153 102 ntBASIC1.13□□□□□ -2.23
TRIM3O75382 Y_RNA.390-201ENST00000383932 102 ntBASIC1.13□□□□□ -2.23
TRIM3O75382 RNU6-926P-201ENST00000384075 107 ntBASIC1.13□□□□□ -2.23
TRIM3O75382 RNU6-376P-201ENST00000384731 106 ntBASIC1.13□□□□□ -2.23
TRIM3O75382 RNU6-1156P-201ENST00000410365 100 ntBASIC1.13□□□□□ -2.23
TRIM3O75382 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.13□□□□□ -2.23
TRIM3O75382 RPL30P15-201ENST00000457129 321 ntBASIC1.13□□□□□ -2.23
TRIM3O75382 AC091021.1-201ENST00000468051 388 ntBASIC1.13□□□□□ -2.23
TRIM3O75382 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.13□□□□□ -2.23
TRIM3O75382 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.13□□□□□ -2.23
TRIM3O75382 AC105758.1-201ENST00000506038 399 ntBASIC1.13□□□□□ -2.23
TRIM3O75382 RNU6-408P-201ENST00000515910 100 ntBASIC1.13□□□□□ -2.23
TRIM3O75382 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.13□□□□□ -2.23
TRIM3O75382 MIR4778-201ENST00000577635 80 ntBASIC1.13□□□□□ -2.23
TRIM3O75382 MIR5690-201ENST00000583739 73 ntBASIC1.13□□□□□ -2.23
TRIM3O75382 Y_RNA.265-201ENST00000364677 108 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.12□□□□□ -2.23
TRIM3O75382 RNU6-890P-201ENST00000384121 107 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 Y_RNA.474-201ENST00000384341 102 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 RNU6-136P-201ENST00000384663 107 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 MIR625-201ENST00000385047 85 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 SNORA69.1-201ENST00000390904 137 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 SNORA75.6-201ENST00000391318 127 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 AC138393.2-201ENST00000414742 246 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.12□□□□□ -2.23
TRIM3O75382 AC098614.3-201ENST00000438957 440 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.12□□□□□ -2.23
TRIM3O75382 MTCO3P10-201ENST00000455912 772 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.12□□□□□ -2.23
TRIM3O75382 RNU7-169P-201ENST00000459456 61 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 AC092991.1-201ENST00000477176 376 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 RNU6-559P-201ENST00000516151 98 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 RN7SKP88-201ENST00000516847 250 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 AC023442.1-201ENST00000531247 422 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 MIR3664-201ENST00000579074 99 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 MIR4781-201ENST00000585250 76 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 AL050343.2-201ENST00000607338 280 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 MIR6078-201ENST00000611069 100 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 AL355073.2-201ENST00000612106 557 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 7SK.8-201ENST00000612110 250 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 7SK.11-201ENST00000615477 250 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 AC073349.3-201ENST00000617616 186 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 AC087588.2-201ENST00000617667 426 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 MIR8065-201ENST00000620577 100 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 7SK.13-201ENST00000622040 250 ntBASIC1.12□□□□□ -2.23
TRIM3O75382 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRIM3O75382 RNU6-53P-201ENST00000365367 106 ntBASIC1.11□□□□□ -2.23
TRIM3O75382 Y_RNA.577-201ENST00000384794 101 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 288 ms