Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
SHISA3A0PJX4 SNORD21-201ENST00000383953 95 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 MIR515-2-201ENST00000384883 83 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 MIR515-1-201ENST00000384884 83 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 MIR449B-201ENST00000384995 97 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 RNY4P18-201ENST00000391107 89 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 Y_RNA.621-201ENST00000411065 96 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 RPL32P35-201ENST00000415214 394 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.85□□□□□ -1.95
SHISA3A0PJX4 MTATP6P21-201ENST00000440681 189 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 UQCRHP3-201ENST00000451503 251 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 RNU1-131P-201ENST00000458943 161 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 RN7SL601P-201ENST00000471221 293 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 NDUFA4P2-201ENST00000489989 244 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 PDCD5P2-201ENST00000507570 312 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 RNU6-341P-201ENST00000516973 96 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 RNU1-104P-201ENST00000517280 175 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 AC007751.1-201ENST00000529260 376 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 AC133485.4-201ENST00000561835 220 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 AC138907.4-201ENST00000570107 226 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 AC039056.2-201ENST00000622261 511 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 MAPK10-362ENST00000641864 4484 ntBASIC2.85□□□□□ -1.95
SHISA3A0PJX4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SHISA3A0PJX4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SHISA3A0PJX4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SHISA3A0PJX4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SHISA3A0PJX4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 SNORD17-201ENST00000390930 237 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 MIR891A-201ENST00000401237 79 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 MIR1289-1-201ENST00000408836 144 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 SNRPGP10-201ENST00000432323 225 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 RPL21P10-201ENST00000463521 490 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 AC018868.1-201ENST00000491307 315 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 RN7SL636P-201ENST00000497504 294 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 AC104619.4-201ENST00000510773 249 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 MRPS17P9-201ENST00000511924 393 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 Y_RNA.709-201ENST00000516952 92 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 RNU2-60P-201ENST00000517290 128 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 IGKV2-26-201ENST00000518305 343 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 SNORA51-201ENST00000606420 132 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 AL121772.2-201ENST00000614331 297 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 MIR6129-201ENST00000616087 109 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 MIR6079-201ENST00000635807 62 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 MIR338-201ENST00000636369 67 ntBASIC2.84□□□□□ -1.95
SHISA3A0PJX4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.84□□□□□ -1.96
SHISA3A0PJX4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHISA3A0PJX4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SHISA3A0PJX4 Y_RNA.52-201ENST00000362760 96 ntBASIC2.83□□□□□ -1.96
SHISA3A0PJX4 RNU6-1292P-201ENST00000383856 107 ntBASIC2.83□□□□□ -1.96
SHISA3A0PJX4 SNORD24-201ENST00000383884 75 ntBASIC2.83□□□□□ -1.96
SHISA3A0PJX4 SNORA40.5-201ENST00000391061 128 ntBASIC2.83□□□□□ -1.96
SHISA3A0PJX4 RN7SKP111-201ENST00000410349 271 ntBASIC2.83□□□□□ -1.96
SHISA3A0PJX4 Y_RNA.617-201ENST00000410920 90 ntBASIC2.83□□□□□ -1.96
SHISA3A0PJX4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.83□□□□□ -1.96
SHISA3A0PJX4 GOT2P5-201ENST00000433995 546 ntBASIC2.83□□□□□ -1.96
SHISA3A0PJX4 AC025518.1-201ENST00000479856 347 ntBASIC2.83□□□□□ -1.96
SHISA3A0PJX4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.83□□□□□ -1.96
SHISA3A0PJX4 RNU6-589P-201ENST00000516485 107 ntBASIC2.83□□□□□ -1.96
SHISA3A0PJX4 Y_RNA.714-201ENST00000517065 90 ntBASIC2.83□□□□□ -1.96
SHISA3A0PJX4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.83□□□□□ -1.96
SHISA3A0PJX4 AC012442.3-202ENST00000636742 206 ntBASIC2.83□□□□□ -1.96
SHISA3A0PJX4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHISA3A0PJX4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SHISA3A0PJX4 RNU6-461P-201ENST00000364195 107 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 RNU6-755P-201ENST00000364400 103 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 SNORA25B-201ENST00000365507 128 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 MIR7-3-201ENST00000384898 110 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 SNORA26.7-201ENST00000391288 122 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 EDDM3CP-201ENST00000415977 425 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 CYCSP4-201ENST00000429682 331 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 AC104332.2-201ENST00000429959 156 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 AC006028.1-201ENST00000438379 402 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 AC233266.1-201ENST00000454518 96 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 RNU7-94P-201ENST00000459576 63 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 RN7SKP18-201ENST00000516005 275 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 RNU6-1041P-201ENST00000516254 102 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 RNU1-95P-201ENST00000516357 160 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 RNU6-1061P-201ENST00000516530 99 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 RNU1-142P-201ENST00000516682 145 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 RNU1-128P-201ENST00000516704 160 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 AC024995.1-201ENST00000523014 93 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 MTND5P34-201ENST00000568888 325 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 MIR3944-201ENST00000581277 108 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 AC242852.1-201ENST00000612151 96 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 AL449363.1-201ENST00000617815 186 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 AC244015.1-201ENST00000622301 99 ntBASIC2.82□□□□□ -1.96
SHISA3A0PJX4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHISA3A0PJX4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHISA3A0PJX4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHISA3A0PJX4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.82□□□□□ -1.96
SHISA3A0PJX4 AC092435.3-201ENST00000565538 3654 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SHISA3A0PJX4 RNA5SP124-201ENST00000362739 110 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 SNORD58C-201ENST00000365223 64 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 SNORA5A-201ENST00000384111 134 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.81□□□□□ -1.96
SHISA3A0PJX4 AL035423.1-201ENST00000420331 213 ntBASIC2.81□□□□□ -1.96
SHISA3A0PJX4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SHISA3A0PJX4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 232.8 ms