Protein–RNA interactions for Protein: Q9Y496

KIF3A, Kinesin-like protein KIF3A, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3AQ9Y496 AC002429.1-201ENST00000437672 148 ntBASIC0.98□□□□□ -2.25
KIF3AQ9Y496 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.98□□□□□ -2.25
KIF3AQ9Y496 MTND2P38-201ENST00000522536 667 ntBASIC0.98□□□□□ -2.25
KIF3AQ9Y496 FAM71BP1-201ENST00000604431 523 ntBASIC0.98□□□□□ -2.25
KIF3AQ9Y496 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.97□□□□□ -2.25
KIF3AQ9Y496 ZNF299P-201ENST00000406845 1804 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 Y_RNA.124-201ENST00000363339 93 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 RNU6-595P-201ENST00000363944 107 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 RNU6-407P-201ENST00000365280 104 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 MIR19B1-201ENST00000384829 87 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 RNU6-1001P-201ENST00000411265 100 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 POLR2J4-204ENST00000418424 324 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 USP9YP16-201ENST00000430287 407 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 AC104332.1-201ENST00000440471 797 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 USP9YP23-201ENST00000455085 407 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 OR9P1P-201ENST00000496431 281 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 RNU2-56P-201ENST00000516826 190 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 RNU6-1088P-201ENST00000516850 104 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 AC090049.2-201ENST00000550377 109 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.97□□□□□ -2.25
KIF3AQ9Y496 MIR3973-201ENST00000579824 107 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 AC006435.5-201ENST00000624486 112 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 AC027514.1-201ENST00000588561 1603 ntBASIC0.97□□□□□ -2.25
KIF3AQ9Y496 Y_RNA.106-201ENST00000363189 100 ntBASIC0.96□□□□□ -2.26
KIF3AQ9Y496 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
KIF3AQ9Y496 RNU11-5P-201ENST00000391216 129 ntBASIC0.96□□□□□ -2.26
KIF3AQ9Y496 AL451046.2-201ENST00000403074 277 ntBASIC0.96□□□□□ -2.26
KIF3AQ9Y496 RNU6-1148P-201ENST00000410992 104 ntBASIC0.96□□□□□ -2.26
KIF3AQ9Y496 RNU6-1114P-201ENST00000516022 107 ntBASIC0.96□□□□□ -2.26
KIF3AQ9Y496 SNORD79.1-201ENST00000516069 84 ntBASIC0.96□□□□□ -2.26
KIF3AQ9Y496 RNU6-1291P-201ENST00000516591 104 ntBASIC0.96□□□□□ -2.26
KIF3AQ9Y496 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.96□□□□□ -2.26
KIF3AQ9Y496 AC100810.6-201ENST00000638068 285 ntBASIC0.96□□□□□ -2.26
KIF3AQ9Y496 AC068137.4-201ENST00000638485 296 ntBASIC0.96□□□□□ -2.26
KIF3AQ9Y496 MTND5P16-201ENST00000460269 1703 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
KIF3AQ9Y496 SNORA1B-201ENST00000362535 133 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 RNU6-842P-201ENST00000384269 107 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 MTCO3P19-201ENST00000415864 321 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 AC114482.1-201ENST00000418010 247 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 USMG5P1-201ENST00000425964 177 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 DLGAP5P1-201ENST00000430307 464 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.95□□□□□ -2.26
KIF3AQ9Y496 AC046134.1-201ENST00000514454 666 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 RNU7-12P-201ENST00000516030 62 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 RNU6-864P-201ENST00000516256 108 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 Y_RNA.706-201ENST00000516933 99 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 RNU6-1314P-201ENST00000517139 104 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 AC109635.3-201ENST00000529536 185 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 RPL21P9-201ENST00000556149 474 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 FAM106DP-201ENST00000586416 501 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.95□□□□□ -2.26
KIF3AQ9Y496 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 MIR6128-201ENST00000615528 109 ntBASIC0.95□□□□□ -2.26
KIF3AQ9Y496 Y_RNA.194-201ENST00000363985 102 ntBASIC0.94□□□□□ -2.26
KIF3AQ9Y496 Y_RNA.224-201ENST00000364308 111 ntBASIC0.94□□□□□ -2.26
KIF3AQ9Y496 RNU1-36P-201ENST00000365130 165 ntBASIC0.94□□□□□ -2.26
KIF3AQ9Y496 RNU6-831P-201ENST00000384548 107 ntBASIC0.94□□□□□ -2.26
KIF3AQ9Y496 RNU1-139P-201ENST00000391307 165 ntBASIC0.94□□□□□ -2.26
KIF3AQ9Y496 AC018865.2-201ENST00000423631 129 ntBASIC0.94□□□□□ -2.26
KIF3AQ9Y496 CBX3P8-201ENST00000532412 525 ntBASIC0.94□□□□□ -2.26
KIF3AQ9Y496 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.94□□□□□ -2.26
KIF3AQ9Y496 AC125232.2-201ENST00000592457 143 ntBASIC0.94□□□□□ -2.26
KIF3AQ9Y496 AL117336.2-201ENST00000602435 335 ntBASIC0.94□□□□□ -2.26
KIF3AQ9Y496 AL357075.2-201ENST00000614906 189 ntBASIC0.94□□□□□ -2.26
KIF3AQ9Y496 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.94□□□□□ -2.26
KIF3AQ9Y496 MIR6866-201ENST00000638146 69 ntBASIC0.94□□□□□ -2.26
KIF3AQ9Y496 Y_RNA.473-201ENST00000384333 102 ntBASIC0.93□□□□□ -2.26
KIF3AQ9Y496 RNU6-376P-201ENST00000384731 106 ntBASIC0.93□□□□□ -2.26
KIF3AQ9Y496 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.93□□□□□ -2.26
KIF3AQ9Y496 AC022493.2-201ENST00000506122 481 ntBASIC0.93□□□□□ -2.26
KIF3AQ9Y496 PDCD5P2-201ENST00000507570 312 ntBASIC0.93□□□□□ -2.26
KIF3AQ9Y496 RNA5SP20-201ENST00000515976 84 ntBASIC0.93□□□□□ -2.26
KIF3AQ9Y496 RNU6-322P-201ENST00000516010 103 ntBASIC0.93□□□□□ -2.26
KIF3AQ9Y496 RNU1-54P-201ENST00000517181 120 ntBASIC0.93□□□□□ -2.26
KIF3AQ9Y496 AP002001.1-203ENST00000534002 267 ntBASIC0.93□□□□□ -2.26
KIF3AQ9Y496 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.93□□□□□ -2.26
KIF3AQ9Y496 AC091178.2-201ENST00000584401 117 ntBASIC0.93□□□□□ -2.26
KIF3AQ9Y496 AC100812.1-201ENST00000607622 580 ntBASIC0.93□□□□□ -2.26
KIF3AQ9Y496 AC008163.1-202ENST00000636004 2889 ntBASIC0.93□□□□□ -2.26
KIF3AQ9Y496 SNORD114-24-201ENST00000365029 72 ntBASIC0.92□□□□□ -2.26
KIF3AQ9Y496 RNU6-596P-201ENST00000365395 98 ntBASIC0.92□□□□□ -2.26
KIF3AQ9Y496 SNORA2.2-201ENST00000365473 135 ntBASIC0.92□□□□□ -2.26
KIF3AQ9Y496 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.92□□□□□ -2.26
KIF3AQ9Y496 ELOCP21-201ENST00000412558 336 ntBASIC0.92□□□□□ -2.26
KIF3AQ9Y496 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.92□□□□□ -2.26
KIF3AQ9Y496 UQCRBP2-201ENST00000447827 297 ntBASIC0.92□□□□□ -2.26
KIF3AQ9Y496 RPS29P1-201ENST00000465274 159 ntBASIC0.92□□□□□ -2.26
KIF3AQ9Y496 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.92□□□□□ -2.26
KIF3AQ9Y496 RPS26P48-201ENST00000491713 339 ntBASIC0.92□□□□□ -2.26
KIF3AQ9Y496 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.92□□□□□ -2.26
KIF3AQ9Y496 PSMC1P5-201ENST00000512850 177 ntBASIC0.92□□□□□ -2.26
KIF3AQ9Y496 RNU6-341P-201ENST00000516973 96 ntBASIC0.92□□□□□ -2.26
KIF3AQ9Y496 RNU6-1116P-201ENST00000517269 99 ntBASIC0.92□□□□□ -2.26
KIF3AQ9Y496 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.92□□□□□ -2.26
KIF3AQ9Y496 AC024909.2-201ENST00000553035 286 ntBASIC0.92□□□□□ -2.26
KIF3AQ9Y496 AL121579.1-201ENST00000555129 305 ntBASIC0.92□□□□□ -2.26
KIF3AQ9Y496 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.92□□□□□ -2.26
KIF3AQ9Y496 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms