Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 MIR181A2-201ENST00000384863 110 ntBASIC3.33□□□□□ -1.88
CBX8Q9HC52 MIR218-1-201ENST00000384999 110 ntBASIC3.33□□□□□ -1.88
CBX8Q9HC52 MIR95-201ENST00000385072 81 ntBASIC3.33□□□□□ -1.88
CBX8Q9HC52 MIR591-201ENST00000385290 95 ntBASIC3.33□□□□□ -1.88
CBX8Q9HC52 RNA5SP511-201ENST00000410487 115 ntBASIC3.33□□□□□ -1.88
CBX8Q9HC52 RN7SKP101-201ENST00000411376 320 ntBASIC3.33□□□□□ -1.88
CBX8Q9HC52 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.33□□□□□ -1.88
CBX8Q9HC52 RPL23AP58-201ENST00000440453 469 ntBASIC3.33□□□□□ -1.88
CBX8Q9HC52 RPL23AP54-201ENST00000495129 419 ntBASIC3.33□□□□□ -1.88
CBX8Q9HC52 RNU2-34P-201ENST00000516534 121 ntBASIC3.33□□□□□ -1.88
CBX8Q9HC52 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.33□□□□□ -1.88
CBX8Q9HC52 AC015720.1-201ENST00000565251 277 ntBASIC3.33□□□□□ -1.88
CBX8Q9HC52 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.33□□□□□ -1.88
CBX8Q9HC52 AL021707.8-201ENST00000609428 183 ntBASIC3.33□□□□□ -1.88
CBX8Q9HC52 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.33□□□□□ -1.88
CBX8Q9HC52 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
CBX8Q9HC52 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CBX8Q9HC52 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.33□□□□□ -1.88
CBX8Q9HC52 RNA5SP205-201ENST00000364653 136 ntBASIC3.32□□□□□ -1.88
CBX8Q9HC52 Y_RNA.542-201ENST00000384641 111 ntBASIC3.32□□□□□ -1.88
CBX8Q9HC52 SNORD88.1-201ENST00000408684 91 ntBASIC3.32□□□□□ -1.88
CBX8Q9HC52 AC008134.1-201ENST00000420943 193 ntBASIC3.32□□□□□ -1.88
CBX8Q9HC52 SNRPGP8-201ENST00000454064 226 ntBASIC3.32□□□□□ -1.88
CBX8Q9HC52 BX510359.1-201ENST00000456973 237 ntBASIC3.32□□□□□ -1.88
CBX8Q9HC52 RN7SL863P-201ENST00000462370 296 ntBASIC3.32□□□□□ -1.88
CBX8Q9HC52 AC092991.1-201ENST00000477176 376 ntBASIC3.32□□□□□ -1.88
CBX8Q9HC52 PRELID2P1-201ENST00000552837 301 ntBASIC3.32□□□□□ -1.88
CBX8Q9HC52 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.32□□□□□ -1.88
CBX8Q9HC52 MIR3199-1-201ENST00000582434 88 ntBASIC3.32□□□□□ -1.88
CBX8Q9HC52 AC013412.1-201ENST00000610687 192 ntBASIC3.32□□□□□ -1.88
CBX8Q9HC52 XIST_intron.1-201ENST00000619444 68 ntBASIC3.32□□□□□ -1.88
CBX8Q9HC52 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.32□□□□□ -1.88
CBX8Q9HC52 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.32□□□□□ -1.88
CBX8Q9HC52 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CBX8Q9HC52 SNORD45.3-201ENST00000363836 72 ntBASIC3.31□□□□□ -1.88
CBX8Q9HC52 Y_RNA.261-201ENST00000364631 102 ntBASIC3.31□□□□□ -1.88
CBX8Q9HC52 RNU6-1240P-201ENST00000365155 104 ntBASIC3.31□□□□□ -1.88
CBX8Q9HC52 RNU6-438P-201ENST00000365561 103 ntBASIC3.31□□□□□ -1.88
CBX8Q9HC52 Y_RNA.393-201ENST00000383936 102 ntBASIC3.31□□□□□ -1.88
CBX8Q9HC52 RNU1-101P-201ENST00000391171 127 ntBASIC3.31□□□□□ -1.88
CBX8Q9HC52 RNA5SP496-201ENST00000391240 109 ntBASIC3.31□□□□□ -1.88
CBX8Q9HC52 Y_RNA.629-201ENST00000411368 105 ntBASIC3.31□□□□□ -1.88
CBX8Q9HC52 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.31□□□□□ -1.88
CBX8Q9HC52 MTCO1P44-201ENST00000441935 243 ntBASIC3.31□□□□□ -1.88
CBX8Q9HC52 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
CBX8Q9HC52 AC091152.2-201ENST00000591628 2569 ntBASIC3.31□□□□□ -1.88
CBX8Q9HC52 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.31□□□□□ -1.88
CBX8Q9HC52 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CBX8Q9HC52 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CBX8Q9HC52 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CBX8Q9HC52 Y_RNA.71-201ENST00000362892 104 ntBASIC3.3□□□□□ -1.88
CBX8Q9HC52 Y_RNA.127-201ENST00000363386 109 ntBASIC3.3□□□□□ -1.88
CBX8Q9HC52 RNY1P11-201ENST00000363759 113 ntBASIC3.3□□□□□ -1.88
CBX8Q9HC52 RNU6-546P-201ENST00000383991 107 ntBASIC3.3□□□□□ -1.88
CBX8Q9HC52 SNORD37.2-201ENST00000391075 66 ntBASIC3.3□□□□□ -1.88
CBX8Q9HC52 RNU2-32P-201ENST00000411193 191 ntBASIC3.3□□□□□ -1.88
CBX8Q9HC52 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.3□□□□□ -1.88
CBX8Q9HC52 RPS27P1-201ENST00000450552 247 ntBASIC3.3□□□□□ -1.88
CBX8Q9HC52 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.3□□□□□ -1.88
CBX8Q9HC52 AC080013.2-201ENST00000460866 323 ntBASIC3.3□□□□□ -1.88
CBX8Q9HC52 SEM1P1-201ENST00000506694 209 ntBASIC3.3□□□□□ -1.88
CBX8Q9HC52 RNA5SP490-201ENST00000517141 136 ntBASIC3.3□□□□□ -1.88
CBX8Q9HC52 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.3□□□□□ -1.88
CBX8Q9HC52 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.3□□□□□ -1.88
CBX8Q9HC52 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.3□□□□□ -1.88
CBX8Q9HC52 U6.98-201ENST00000637157 84 ntBASIC3.3□□□□□ -1.88
CBX8Q9HC52 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CBX8Q9HC52 MIR622-201ENST00000638396 96 ntBASIC3.3□□□□□ -1.88
CBX8Q9HC52 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.3□□□□□ -1.88
CBX8Q9HC52 AC080128.1-201ENST00000474389 1917 ntBASIC3.29□□□□□ -1.88
CBX8Q9HC52 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CBX8Q9HC52 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CBX8Q9HC52 Y_RNA.81-201ENST00000362997 102 ntBASIC3.29□□□□□ -1.88
CBX8Q9HC52 SNORD116-14-201ENST00000383894 92 ntBASIC3.29□□□□□ -1.88
CBX8Q9HC52 SNORD116-17-201ENST00000383929 92 ntBASIC3.29□□□□□ -1.88
CBX8Q9HC52 SNORD116-15-201ENST00000384445 92 ntBASIC3.29□□□□□ -1.88
CBX8Q9HC52 SNORD116-19-201ENST00000384729 92 ntBASIC3.29□□□□□ -1.88
CBX8Q9HC52 Y_RNA.622-201ENST00000411091 108 ntBASIC3.29□□□□□ -1.88
CBX8Q9HC52 AC010154.1-201ENST00000425857 269 ntBASIC3.29□□□□□ -1.88
CBX8Q9HC52 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.29□□□□□ -1.88
CBX8Q9HC52 MIR5739-201ENST00000619803 80 ntBASIC3.29□□□□□ -1.88
CBX8Q9HC52 MIR6844-201ENST00000637122 62 ntBASIC3.29□□□□□ -1.88
CBX8Q9HC52 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CBX8Q9HC52 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CBX8Q9HC52 RNU1-22P-201ENST00000363334 158 ntBASIC3.28□□□□□ -1.88
CBX8Q9HC52 Y_RNA.251-201ENST00000364551 99 ntBASIC3.28□□□□□ -1.88
CBX8Q9HC52 MIR539-201ENST00000365690 78 ntBASIC3.28□□□□□ -1.88
CBX8Q9HC52 SNORA72-201ENST00000384339 132 ntBASIC3.28□□□□□ -1.88
CBX8Q9HC52 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.28□□□□□ -1.88
CBX8Q9HC52 RNU2-48P-201ENST00000410694 191 ntBASIC3.28□□□□□ -1.88
CBX8Q9HC52 AC025750.2-201ENST00000442609 450 ntBASIC3.28□□□□□ -1.88
CBX8Q9HC52 AL357134.1-201ENST00000445848 426 ntBASIC3.28□□□□□ -1.88
CBX8Q9HC52 RN7SL601P-201ENST00000471221 293 ntBASIC3.28□□□□□ -1.88
CBX8Q9HC52 RPS27P22-201ENST00000478056 241 ntBASIC3.28□□□□□ -1.88
CBX8Q9HC52 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CBX8Q9HC52 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CBX8Q9HC52 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CBX8Q9HC52 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CBX8Q9HC52 RNU1-23P-201ENST00000363361 144 ntBASIC3.27□□□□□ -1.89
CBX8Q9HC52 RNU4-41P-201ENST00000364426 143 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms