Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MTND5P16-201ENST00000460269 1703 ntBASIC1.22□□□□□ -2.21
VMP1Q96GC9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.22□□□□□ -2.21
VMP1Q96GC9 AL391516.1-201ENST00000554380 2449 ntBASIC1.21□□□□□ -2.22
VMP1Q96GC9 RNU6-1264P-201ENST00000383891 107 ntBASIC1.21□□□□□ -2.22
VMP1Q96GC9 MIR653-201ENST00000385279 96 ntBASIC1.21□□□□□ -2.22
VMP1Q96GC9 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
VMP1Q96GC9 RNU6-510P-201ENST00000391239 108 ntBASIC1.21□□□□□ -2.22
VMP1Q96GC9 UQCRBP2-201ENST00000447827 297 ntBASIC1.21□□□□□ -2.22
VMP1Q96GC9 SNORA31.2-201ENST00000516019 134 ntBASIC1.21□□□□□ -2.22
VMP1Q96GC9 Y_RNA.682-201ENST00000516457 100 ntBASIC1.21□□□□□ -2.22
VMP1Q96GC9 RNU2-56P-201ENST00000516826 190 ntBASIC1.21□□□□□ -2.22
VMP1Q96GC9 AF235103.2-201ENST00000525753 346 ntBASIC1.21□□□□□ -2.22
VMP1Q96GC9 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.21□□□□□ -2.22
VMP1Q96GC9 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.21□□□□□ -2.22
VMP1Q96GC9 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
VMP1Q96GC9 AC139792.2-201ENST00000624218 587 ntBASIC1.21□□□□□ -2.22
VMP1Q96GC9 MIR190B-201ENST00000401119 79 ntBASIC1.2□□□□□ -2.22
VMP1Q96GC9 AL355796.1-201ENST00000406706 323 ntBASIC1.2□□□□□ -2.22
VMP1Q96GC9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.2□□□□□ -2.22
VMP1Q96GC9 FCF1P9-201ENST00000412546 282 ntBASIC1.2□□□□□ -2.22
VMP1Q96GC9 AC004223.1-201ENST00000479840 271 ntBASIC1.2□□□□□ -2.22
VMP1Q96GC9 RNU6-322P-201ENST00000516010 103 ntBASIC1.2□□□□□ -2.22
VMP1Q96GC9 AC090049.2-201ENST00000550377 109 ntBASIC1.2□□□□□ -2.22
VMP1Q96GC9 AC068790.6-201ENST00000602558 258 ntBASIC1.2□□□□□ -2.22
VMP1Q96GC9 AC018462.2-201ENST00000605375 395 ntBASIC1.2□□□□□ -2.22
VMP1Q96GC9 Y_RNA.267-201ENST00000364679 109 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 RNU6-407P-201ENST00000365280 104 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 RNU6-424P-201ENST00000384367 105 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 MIR329-1-201ENST00000385028 80 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 RNU6-910P-201ENST00000390844 107 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.19□□□□□ -2.22
VMP1Q96GC9 RNU6-321P-201ENST00000410912 106 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 RNU6-1001P-201ENST00000411265 100 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 EIF1P2-201ENST00000428233 350 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 CALM2P4-201ENST00000430810 426 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 MTND1P4-201ENST00000435196 415 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.19□□□□□ -2.22
VMP1Q96GC9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.19□□□□□ -2.22
VMP1Q96GC9 AC069439.1-201ENST00000494739 167 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 AC018710.1-201ENST00000506509 158 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.19□□□□□ -2.22
VMP1Q96GC9 RNA5SP20-201ENST00000515976 84 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 RNU6-947P-201ENST00000516264 106 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 RNU6-341P-201ENST00000516973 96 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.19□□□□□ -2.22
VMP1Q96GC9 AC073544.1-201ENST00000600110 1595 ntBASIC1.19□□□□□ -2.22
VMP1Q96GC9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
VMP1Q96GC9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VMP1Q96GC9 AC027514.1-201ENST00000588561 1603 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 RNU6-700P-201ENST00000391043 107 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 U8.16-201ENST00000391279 133 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 AL451046.2-201ENST00000403074 277 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 MIR548K-201ENST00000408406 116 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 MTND3P8-201ENST00000412909 339 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 MRPL35P3-201ENST00000421557 364 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 AC091021.1-201ENST00000468051 388 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 AC048334.1-201ENST00000477975 159 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 TRMT112P2-201ENST00000512910 132 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 AC026782.1-201ENST00000512952 449 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 RNU6-1016P-201ENST00000516689 94 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.18□□□□□ -2.22
VMP1Q96GC9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.18□□□□□ -2.22
VMP1Q96GC9 AC060780.3-201ENST00000589464 80 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 AL050343.2-201ENST00000607338 280 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 MIR6078-201ENST00000611069 100 ntBASIC1.18□□□□□ -2.22
VMP1Q96GC9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.18□□□□□ -2.22
VMP1Q96GC9 RNU4-79P-201ENST00000362764 141 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 RNU6-593P-201ENST00000364716 112 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 SNORA2.2-201ENST00000365473 135 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 Y_RNA.364-201ENST00000365532 101 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 RNU6-1145P-201ENST00000384246 107 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 RNU6-376P-201ENST00000384731 106 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 MIR548F5-201ENST00000408421 86 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 ELOCP21-201ENST00000412558 336 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 UBE2V1P7-201ENST00000446395 340 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 RPS29P29-201ENST00000456396 171 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 RNU7-87P-201ENST00000459343 62 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 OR9P1P-201ENST00000496431 281 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 AC005840.1-201ENST00000498412 377 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 UBL5P1-201ENST00000507979 193 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 AC074133.1-201ENST00000515696 183 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 RNU7-12P-201ENST00000516030 62 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 RNU6-358P-201ENST00000516564 75 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.17□□□□□ -2.22
VMP1Q96GC9 AP002004.2-201ENST00000531656 154 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.17□□□□□ -2.22
VMP1Q96GC9 MIR5701-3-201ENST00000578890 82 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 MIR5701-1-201ENST00000585138 82 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.17□□□□□ -2.22
VMP1Q96GC9 AC125232.2-201ENST00000592457 143 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 MIR5701-2-201ENST00000615634 82 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 AC104260.1-201ENST00000616660 539 ntBASIC1.17□□□□□ -2.22
VMP1Q96GC9 SNORA27.1-201ENST00000362604 124 ntBASIC1.16□□□□□ -2.22
VMP1Q96GC9 RNY1P10-201ENST00000363268 113 ntBASIC1.16□□□□□ -2.22
VMP1Q96GC9 Y_RNA.473-201ENST00000384333 102 ntBASIC1.16□□□□□ -2.22
VMP1Q96GC9 Y_RNA.498-201ENST00000384460 102 ntBASIC1.16□□□□□ -2.22
VMP1Q96GC9 RNU6-192P-201ENST00000391253 100 ntBASIC1.16□□□□□ -2.22
VMP1Q96GC9 RNA5SP482-201ENST00000391269 118 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 246.7 ms