Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SNORA48.2-201ENST00000390926 124 ntBASIC2.53□□□□□ -2
CPEB3Q8NE35 AL513477.1-202ENST00000417061 214 ntBASIC2.53□□□□□ -2
CPEB3Q8NE35 HSPE1P21-201ENST00000438283 308 ntBASIC2.53□□□□□ -2
CPEB3Q8NE35 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.53□□□□□ -2
CPEB3Q8NE35 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.53□□□□□ -2
CPEB3Q8NE35 AC245047.8-201ENST00000456455 284 ntBASIC2.53□□□□□ -2
CPEB3Q8NE35 SCGB1D5P-201ENST00000515134 247 ntBASIC2.53□□□□□ -2
CPEB3Q8NE35 SNORD116-25-201ENST00000516517 92 ntBASIC2.53□□□□□ -2
CPEB3Q8NE35 RNU7-121P-201ENST00000516604 62 ntBASIC2.53□□□□□ -2
CPEB3Q8NE35 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.53□□□□□ -2
CPEB3Q8NE35 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.53□□□□□ -2
CPEB3Q8NE35 AL391903.3-201ENST00000612158 163 ntBASIC2.53□□□□□ -2
CPEB3Q8NE35 AC068647.2-201ENST00000637380 353 ntBASIC2.53□□□□□ -2
CPEB3Q8NE35 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.53□□□□□ -2
CPEB3Q8NE35 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
CPEB3Q8NE35 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.52□□□□□ -2.01
CPEB3Q8NE35 AL355596.1-201ENST00000565399 3996 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 Y_RNA.215-201ENST00000364204 112 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 Y_RNA.229-201ENST00000364347 113 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 RNU6-407P-201ENST00000365280 104 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 RNU6-418P-201ENST00000384035 107 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 RNU6-1235P-201ENST00000384559 107 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 Y_RNA.568-201ENST00000384742 113 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 MIR518C-201ENST00000384822 101 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 MT-TT-201ENST00000387460 66 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 NDUFB4P4-201ENST00000404822 243 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 AC016909.1-201ENST00000415916 166 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.52□□□□□ -2.01
CPEB3Q8NE35 SUMO1P4-201ENST00000429430 302 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.52□□□□□ -2.01
CPEB3Q8NE35 RNU6-498P-201ENST00000459468 107 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.52□□□□□ -2.01
CPEB3Q8NE35 RNU6-948P-201ENST00000516374 107 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 RNU6-1007P-201ENST00000516586 107 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 AC025647.1-201ENST00000517879 253 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.52□□□□□ -2.01
CPEB3Q8NE35 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.52□□□□□ -2.01
CPEB3Q8NE35 AP003357.1-201ENST00000604497 148 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.52□□□□□ -2.01
CPEB3Q8NE35 Y_RNA.778-201ENST00000620203 90 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CPEB3Q8NE35 AC108206.1-201ENST00000570186 4159 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CPEB3Q8NE35 Z82195.2-201ENST00000612348 18351 ntBASIC2.52□□□□□ -2.01
CPEB3Q8NE35 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CPEB3Q8NE35 AC009487.4-201ENST00000624969 3585 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CPEB3Q8NE35 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CPEB3Q8NE35 AL356292.1-201ENST00000283110 373 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 RNU6-151P-201ENST00000364158 107 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 Y_RNA.343-201ENST00000365354 112 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 RNU6-1323P-201ENST00000384025 107 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 Y_RNA.488-201ENST00000384403 102 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 SNORA44-201ENST00000384584 132 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 MIR95-201ENST00000385072 81 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 RNU6-383P-201ENST00000410864 94 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 EEF1A1P41-201ENST00000414667 207 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 AL162725.1-201ENST00000435405 301 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 HMGN2P18-201ENST00000450680 270 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 AC080013.2-201ENST00000460866 323 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 AP004217.1-201ENST00000480579 346 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 RPL36AP21-201ENST00000490372 323 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 SNORA31.15-201ENST00000516771 132 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.51□□□□□ -2.01
CPEB3Q8NE35 AC027419.1-201ENST00000522976 328 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.51□□□□□ -2.01
CPEB3Q8NE35 AC022616.8-201ENST00000533569 253 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 PRELID2P1-201ENST00000552837 301 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.51□□□□□ -2.01
CPEB3Q8NE35 MIR4724-201ENST00000579485 89 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 AC090115.4-201ENST00000609970 188 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 AC012640.5-201ENST00000623897 319 ntBASIC2.51□□□□□ -2.01
CPEB3Q8NE35 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CPEB3Q8NE35 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CPEB3Q8NE35 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CPEB3Q8NE35 MIR367-201ENST00000362299 68 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 RNU1-23P-201ENST00000363361 144 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 RNU6-117P-201ENST00000365415 107 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 RNU6-438P-201ENST00000365561 103 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 RNU6-546P-201ENST00000383991 107 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 Y_RNA.497-201ENST00000384447 98 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 SNORA36B-201ENST00000410438 131 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 RNU2-32P-201ENST00000411193 191 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 COTL1P1-201ENST00000422309 375 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 AL139132.1-201ENST00000431587 344 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.5□□□□□ -2.01
CPEB3Q8NE35 AC010531.2-201ENST00000465012 153 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 RNA5SP20-201ENST00000515976 84 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 RNU6-826P-201ENST00000516827 104 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 AC127455.1-201ENST00000565496 145 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 AC013412.1-201ENST00000610687 192 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 MIR5739-201ENST00000619803 80 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 AC010297.1-201ENST00000623948 149 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 AC006435.5-201ENST00000624486 112 ntBASIC2.5□□□□□ -2.01
CPEB3Q8NE35 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.5□□□□□ -2.01
CPEB3Q8NE35 AL365361.1-201ENST00000566942 3481 ntBASIC2.49□□□□□ -2.01
CPEB3Q8NE35 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CPEB3Q8NE35 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CPEB3Q8NE35 MIR627-201ENST00000384979 97 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms